data_5CCN
#
_model_server_result.job_id            YR3G4gxnuhFk3WdsZLWXWQ 
_model_server_result.datetime_utc      '2024-11-18 11:34:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ccn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":206}' 
#
_entry.id    5CCN 
#
_exptl.entry_id    5CCN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              328.366 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ethyl N-{[3-(3-aminopyridin-4-yl)benzyl]carbamoyl}glycinate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CCN 
_cell.length_a            57.45 
_cell.length_b            57.45 
_cell.length_c            114.05 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CCN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B K K . A K 201 1_555 E O4 PGE . A PGE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? 
metalc ? metalc2 B K K . A K 201 1_555 E O1 PGE . A PGE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.478 ? 
metalc ? metalc3 B K K . A K 201 1_555 E O2 PGE . A PGE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc4 B K K . A K 201 1_555 E O3 PGE . A PGE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? 
metalc ? metalc5 B K K . A K 201 1_555 E O1 PGE . A PGE 204 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.478 ? 
metalc ? metalc6 B K K . A K 201 1_555 E O2 PGE . A PGE 204 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc7 B K K . A K 201 1_555 E O3 PGE . A PGE 204 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? 
metalc ? metalc8 B K K . A K 201 1_555 E O4 PGE . A PGE 204 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? 
#
_chem_comp.formula           'C17 H20 N4 O3' 
_chem_comp.formula_weight    328.366 
_chem_comp.id                4ZZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ethyl N-{[3-(3-aminopyridin-4-yl)benzyl]carbamoyl}glycinate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O9 C8 4ZZ doub 1 n n 
C11 N10 4ZZ sing 2 n n 
C11 C12 4ZZ sing 3 n n 
C8 N10 4ZZ sing 4 n n 
C8 N7 4ZZ sing 5 n n 
C22 C23 4ZZ doub 6 n y 
C22 N21 4ZZ sing 7 n y 
C23 C18 4ZZ sing 8 n y 
C12 C13 4ZZ doub 9 n y 
C12 C17 4ZZ sing 10 n y 
C6 N7 4ZZ sing 11 n n 
C6 C4 4ZZ sing 12 n n 
C13 C14 4ZZ sing 13 n y 
N21 C20 4ZZ doub 14 n y 
O3 C4 4ZZ sing 15 n n 
O3 C2 4ZZ sing 16 n n 
C17 C16 4ZZ doub 17 n y 
C4 O5 4ZZ doub 18 n n 
C14 C18 4ZZ sing 19 n n 
C14 C15 4ZZ doub 20 n y 
C18 C19 4ZZ doub 21 n y 
C1 C2 4ZZ sing 22 n n 
C16 C15 4ZZ sing 23 n y 
C20 C19 4ZZ sing 24 n y 
C19 N24 4ZZ sing 25 n n 
C15 H1 4ZZ sing 26 n n 
C16 H2 4ZZ sing 27 n n 
C17 H3 4ZZ sing 28 n n 
C22 H4 4ZZ sing 29 n n 
C20 H5 4ZZ sing 30 n n 
C2 H6 4ZZ sing 31 n n 
C2 H7 4ZZ sing 32 n n 
C13 H8 4ZZ sing 33 n n 
C1 H9 4ZZ sing 34 n n 
C1 H10 4ZZ sing 35 n n 
C1 H11 4ZZ sing 36 n n 
C6 H12 4ZZ sing 37 n n 
C6 H13 4ZZ sing 38 n n 
C11 H14 4ZZ sing 39 n n 
C11 H15 4ZZ sing 40 n n 
N7 H16 4ZZ sing 41 n n 
N10 H17 4ZZ sing 42 n n 
C23 H18 4ZZ sing 43 n n 
N24 H19 4ZZ sing 44 n n 
N24 H20 4ZZ sing 45 n n 
#
_atom_sites.entry_id                     5CCN 
_atom_sites.fract_transf_matrix[1][1]    0.017406 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017406 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008768 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 K A 1 201 1 K K . 
C 3 FMT A 1 202 1 FMT FMT . 
D 4 PG4 A 1 203 1 PG4 PG4 . 
E 5 PGE A 1 204 1 PGE PGE . 
F 6 PEG A 1 205 2 PEG PEG . 
G 7 4ZZ A 1 206 1 4ZZ C23 . 
H 8 HOH A 1 301 106 HOH HOH . 
H 8 HOH A 2 302 40 HOH HOH . 
H 8 HOH A 3 303 52 HOH HOH . 
H 8 HOH A 4 304 110 HOH HOH . 
H 8 HOH A 5 305 81 HOH HOH . 
H 8 HOH A 6 306 58 HOH HOH . 
H 8 HOH A 7 307 107 HOH HOH . 
H 8 HOH A 8 308 108 HOH HOH . 
H 8 HOH A 9 309 1 HOH HOH . 
H 8 HOH A 10 310 93 HOH HOH . 
H 8 HOH A 11 311 79 HOH HOH . 
H 8 HOH A 12 312 61 HOH HOH . 
H 8 HOH A 13 313 121 HOH HOH . 
H 8 HOH A 14 314 109 HOH HOH . 
H 8 HOH A 15 315 78 HOH HOH . 
H 8 HOH A 16 316 42 HOH HOH . 
H 8 HOH A 17 317 14 HOH HOH . 
H 8 HOH A 18 318 19 HOH HOH . 
H 8 HOH A 19 319 20 HOH HOH . 
H 8 HOH A 20 320 62 HOH HOH . 
H 8 HOH A 21 321 69 HOH HOH . 
H 8 HOH A 22 322 16 HOH HOH . 
H 8 HOH A 23 323 77 HOH HOH . 
H 8 HOH A 24 324 71 HOH HOH . 
H 8 HOH A 25 325 12 HOH HOH . 
H 8 HOH A 26 326 27 HOH HOH . 
H 8 HOH A 27 327 5 HOH HOH . 
H 8 HOH A 28 328 123 HOH HOH . 
H 8 HOH A 29 329 80 HOH HOH . 
H 8 HOH A 30 330 8 HOH HOH . 
H 8 HOH A 31 331 91 HOH HOH . 
H 8 HOH A 32 332 15 HOH HOH . 
H 8 HOH A 33 333 92 HOH HOH . 
H 8 HOH A 34 334 104 HOH HOH . 
H 8 HOH A 35 335 35 HOH HOH . 
H 8 HOH A 36 336 21 HOH HOH . 
H 8 HOH A 37 337 18 HOH HOH . 
H 8 HOH A 38 338 43 HOH HOH . 
H 8 HOH A 39 339 122 HOH HOH . 
H 8 HOH A 40 340 10 HOH HOH . 
H 8 HOH A 41 341 39 HOH HOH . 
H 8 HOH A 42 342 87 HOH HOH . 
H 8 HOH A 43 343 34 HOH HOH . 
H 8 HOH A 44 344 67 HOH HOH . 
H 8 HOH A 45 345 68 HOH HOH . 
H 8 HOH A 46 346 41 HOH HOH . 
H 8 HOH A 47 347 120 HOH HOH . 
H 8 HOH A 48 348 75 HOH HOH . 
H 8 HOH A 49 349 54 HOH HOH . 
H 8 HOH A 50 350 59 HOH HOH . 
H 8 HOH A 51 351 117 HOH HOH . 
H 8 HOH A 52 352 51 HOH HOH . 
H 8 HOH A 53 353 94 HOH HOH . 
H 8 HOH A 54 354 50 HOH HOH . 
H 8 HOH A 55 355 13 HOH HOH . 
H 8 HOH A 56 356 73 HOH HOH . 
H 8 HOH A 57 357 3 HOH HOH . 
H 8 HOH A 58 358 74 HOH HOH . 
H 8 HOH A 59 359 90 HOH HOH . 
H 8 HOH A 60 360 32 HOH HOH . 
H 8 HOH A 61 361 86 HOH HOH . 
H 8 HOH A 62 362 7 HOH HOH . 
H 8 HOH A 63 363 31 HOH HOH . 
H 8 HOH A 64 364 25 HOH HOH . 
H 8 HOH A 65 365 6 HOH HOH . 
H 8 HOH A 66 366 38 HOH HOH . 
H 8 HOH A 67 367 24 HOH HOH . 
H 8 HOH A 68 368 46 HOH HOH . 
H 8 HOH A 69 369 112 HOH HOH . 
H 8 HOH A 70 370 101 HOH HOH . 
H 8 HOH A 71 371 48 HOH HOH . 
H 8 HOH A 72 372 37 HOH HOH . 
H 8 HOH A 73 373 4 HOH HOH . 
H 8 HOH A 74 374 119 HOH HOH . 
H 8 HOH A 75 375 105 HOH HOH . 
H 8 HOH A 76 376 60 HOH HOH . 
H 8 HOH A 77 377 47 HOH HOH . 
H 8 HOH A 78 378 30 HOH HOH . 
H 8 HOH A 79 379 85 HOH HOH . 
H 8 HOH A 80 380 33 HOH HOH . 
H 8 HOH A 81 381 65 HOH HOH . 
H 8 HOH A 82 382 28 HOH HOH . 
H 8 HOH A 83 383 66 HOH HOH . 
H 8 HOH A 84 384 56 HOH HOH . 
H 8 HOH A 85 385 11 HOH HOH . 
H 8 HOH A 86 386 17 HOH HOH . 
H 8 HOH A 87 387 22 HOH HOH . 
H 8 HOH A 88 388 44 HOH HOH . 
H 8 HOH A 89 389 49 HOH HOH . 
H 8 HOH A 90 390 84 HOH HOH . 
H 8 HOH A 91 391 111 HOH HOH . 
H 8 HOH A 92 392 70 HOH HOH . 
H 8 HOH A 93 393 88 HOH HOH . 
H 8 HOH A 94 394 2 HOH HOH . 
H 8 HOH A 95 395 36 HOH HOH . 
H 8 HOH A 96 396 53 HOH HOH . 
H 8 HOH A 97 397 82 HOH HOH . 
H 8 HOH A 98 398 63 HOH HOH . 
H 8 HOH A 99 399 45 HOH HOH . 
H 8 HOH A 100 400 57 HOH HOH . 
H 8 HOH A 101 401 114 HOH HOH . 
H 8 HOH A 102 402 103 HOH HOH . 
H 8 HOH A 103 403 29 HOH HOH . 
H 8 HOH A 104 404 113 HOH HOH . 
H 8 HOH A 105 405 9 HOH HOH . 
H 8 HOH A 106 406 83 HOH HOH . 
H 8 HOH A 107 407 26 HOH HOH . 
H 8 HOH A 108 408 55 HOH HOH . 
H 8 HOH A 109 409 96 HOH HOH . 
H 8 HOH A 110 410 89 HOH HOH . 
H 8 HOH A 111 411 115 HOH HOH . 
H 8 HOH A 112 412 97 HOH HOH . 
H 8 HOH A 113 413 98 HOH HOH . 
H 8 HOH A 114 414 118 HOH HOH . 
H 8 HOH A 115 415 72 HOH HOH . 
H 8 HOH A 116 416 102 HOH HOH . 
H 8 HOH A 117 417 76 HOH HOH . 
H 8 HOH A 118 418 95 HOH HOH . 
H 8 HOH A 119 419 99 HOH HOH . 
H 8 HOH A 120 420 23 HOH HOH . 
H 8 HOH A 121 421 116 HOH HOH . 
H 8 HOH A 122 422 64 HOH HOH . 
H 8 HOH A 123 423 100 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C14 4ZZ . . . G 7 -3.78 -7.862 4.649 1 44.41 ? C14 4ZZ 206 A 1 
HETATM 2 C C15 4ZZ . . . G 7 -2.724 -8.076 5.596 1 36.98 ? C15 4ZZ 206 A 1 
HETATM 3 C C16 4ZZ . . . G 7 -1.549 -7.358 5.499 1 31.88 ? C16 4ZZ 206 A 1 
HETATM 4 C C17 4ZZ . . . G 7 -1.355 -6.397 4.511 1 30.55 ? C17 4ZZ 206 A 1 
HETATM 5 C C22 4ZZ . . . G 7 -6.956 -9.525 3.324 1 70.64 ? C22 4ZZ 206 A 1 
HETATM 6 C C20 4ZZ . . . G 7 -6.932 -9.972 5.617 1 84.56 ? C20 4ZZ 206 A 1 
HETATM 7 C C19 4ZZ . . . G 7 -5.719 -9.274 5.782 1 76.61 ? C19 4ZZ 206 A 1 
HETATM 8 C C18 4ZZ . . . G 7 -5.1 -8.653 4.651 1 59.5 ? C18 4ZZ 206 A 1 
HETATM 9 C C2 4ZZ . . . G 7 4.334 -2.172 4.965 1 25.41 ? C2 4ZZ 206 A 1 
HETATM 10 C C13 4ZZ . . . G 7 -3.535 -6.89 3.646 1 37.94 ? C13 4ZZ 206 A 1 
HETATM 11 C C1 4ZZ . . . G 7 5.429 -1.178 4.733 1 21.58 ? C1 4ZZ 206 A 1 
HETATM 12 C C6 4ZZ . . . G 7 0.86 -1.467 3.578 1 29.87 ? C6 4ZZ 206 A 1 
HETATM 13 C C4 4ZZ . . . G 7 1.828 -2.035 4.612 1 27.99 ? C4 4ZZ 206 A 1 
HETATM 14 C C8 4ZZ . . . G 7 -0.517 -3.35 2.923 1 33.61 ? C8 4ZZ 206 A 1 
HETATM 15 C C12 4ZZ . . . G 7 -2.349 -6.158 3.571 1 34.77 ? C12 4ZZ 206 A 1 
HETATM 16 C C11 4ZZ . . . G 7 -2.139 -5.147 2.472 1 35.07 ? C11 4ZZ 206 A 1 
HETATM 17 O O3 4ZZ . . . G 7 3.161 -1.526 4.464 1 28.05 ? O3 4ZZ 206 A 1 
HETATM 18 O O5 4ZZ . . . G 7 1.464 -2.806 5.485 1 16.85 ? O5 4ZZ 206 A 1 
HETATM 19 N N7 4ZZ . . . G 7 -0.345 -2.224 3.614 1 31.25 ? N7 4ZZ 206 A 1 
HETATM 20 O O9 4ZZ . . . G 7 0.343 -3.76 2.149 1 34.05 ? O9 4ZZ 206 A 1 
HETATM 21 N N10 4ZZ . . . G 7 -1.705 -3.933 3.127 1 34.28 ? N10 4ZZ 206 A 1 
HETATM 22 N N21 4ZZ . . . G 7 -7.513 -10.076 4.413 1 84.08 ? N21 4ZZ 206 A 1 
HETATM 23 C C23 4ZZ . . . G 7 -5.755 -8.833 3.412 1 60.44 ? C23 4ZZ 206 A 1 
HETATM 24 N N24 4ZZ . . . G 7 -5.202 -9.263 7.189 1 75.85 ? N24 4ZZ 206 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           24 
#