data_5CCR # _model_server_result.job_id nVoy37QYonq1prP7aSKXAQ _model_server_result.datetime_utc '2025-01-15 05:25:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ccr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":207}' # _entry.id 5CCR # _exptl.entry_id 5CCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 325.426 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl N-[(4-aminobenzyl)carbamoyl]-L-methioninate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CCR _cell.length_a 57.59 _cell.length_b 57.59 _cell.length_c 111.76 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B K K . A K 201 1_555 F O4 PGE . A PGE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? metalc ? metalc2 B K K . A K 201 1_555 F O1 PGE . A PGE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.122 ? metalc ? metalc3 B K K . A K 201 1_555 F O2 PGE . A PGE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc4 B K K . A K 201 1_555 F O3 PGE . A PGE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc5 B K K . A K 201 1_555 F O1 PGE . A PGE 205 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.122 ? metalc ? metalc6 B K K . A K 201 1_555 F O2 PGE . A PGE 205 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc7 B K K . A K 201 1_555 F O3 PGE . A PGE 205 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc8 B K K . A K 201 1_555 F O4 PGE . A PGE 205 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? metalc ? metalc9 C K K . A K 202 1_555 G O1 PGE . A PGE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.184 ? metalc ? metalc10 C K K . A K 202 1_555 G O2 PGE . A PGE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? metalc ? metalc11 C K K . A K 202 1_555 G O3 PGE . A PGE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? metalc ? metalc12 C K K . A K 202 1_555 G O4 PGE . A PGE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.968 ? # _chem_comp.formula 'C15 H23 N3 O3 S' _chem_comp.formula_weight 325.426 _chem_comp.id 4ZT _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl N-[(4-aminobenzyl)carbamoyl]-L-methioninate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O13 C2 4ZT doub 1 n n N1 C2 4ZT sing 2 n n N1 C1 4ZT sing 3 n n C2 N10 4ZT sing 4 n n C1 C3 4ZT sing 5 n n N10 C14 4ZT sing 6 n n C14 C15 4ZT sing 7 n n C14 C20 4ZT sing 8 n n C4 C3 4ZT doub 9 n y C4 C5 4ZT sing 10 n y C3 C8 4ZT sing 11 n y C21 C20 4ZT sing 12 n n C21 S22 4ZT sing 13 n n O16 C15 4ZT sing 14 n n O16 C18 4ZT sing 15 n n C15 O17 4ZT doub 16 n n C19 C18 4ZT sing 17 n n C5 C6 4ZT doub 18 n y C8 C7 4ZT doub 19 n y S22 C23 4ZT sing 20 n n C6 C7 4ZT sing 21 n y C6 N9 4ZT sing 22 n n N1 H1 4ZT sing 23 n n C1 H2 4ZT sing 24 n n C1 H3 4ZT sing 25 n n C4 H4 4ZT sing 26 n n C5 H5 4ZT sing 27 n n C7 H6 4ZT sing 28 n n C8 H7 4ZT sing 29 n n N9 H8 4ZT sing 30 n n N9 H9 4ZT sing 31 n n N10 H10 4ZT sing 32 n n C14 H11 4ZT sing 33 n n C18 H12 4ZT sing 34 n n C18 H13 4ZT sing 35 n n C19 H14 4ZT sing 36 n n C19 H15 4ZT sing 37 n n C19 H16 4ZT sing 38 n n C20 H17 4ZT sing 39 n n C20 H18 4ZT sing 40 n n C21 H19 4ZT sing 41 n n C21 H20 4ZT sing 42 n n C23 H21 4ZT sing 43 n n C23 H22 4ZT sing 44 n n C23 H23 4ZT sing 45 n n # _atom_sites.entry_id 5CCR _atom_sites.fract_transf_matrix[1][1] 0.017364 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017364 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008948 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 201 1 K K . C 2 K A 1 202 2 K K . D 3 FMT A 1 203 1 FMT FMT . E 4 PG4 A 1 204 1 PG4 PG4 . F 5 PGE A 1 205 1 PGE PGE . G 5 PGE A 1 206 2 PGE PGE . H 6 4ZT A 1 207 1 4ZT Z28 . I 7 PEG A 1 208 3 PEG PEG . J 8 HOH A 1 301 103 HOH HOH . J 8 HOH A 2 302 14 HOH HOH . J 8 HOH A 3 303 107 HOH HOH . J 8 HOH A 4 304 52 HOH HOH . J 8 HOH A 5 305 40 HOH HOH . J 8 HOH A 6 306 43 HOH HOH . J 8 HOH A 7 307 20 HOH HOH . J 8 HOH A 8 308 82 HOH HOH . J 8 HOH A 9 309 101 HOH HOH . J 8 HOH A 10 310 110 HOH HOH . J 8 HOH A 11 311 42 HOH HOH . J 8 HOH A 12 312 89 HOH HOH . J 8 HOH A 13 313 61 HOH HOH . J 8 HOH A 14 314 71 HOH HOH . J 8 HOH A 15 315 51 HOH HOH . J 8 HOH A 16 316 104 HOH HOH . J 8 HOH A 17 317 73 HOH HOH . J 8 HOH A 18 318 21 HOH HOH . J 8 HOH A 19 319 35 HOH HOH . J 8 HOH A 20 320 69 HOH HOH . J 8 HOH A 21 321 10 HOH HOH . J 8 HOH A 22 322 59 HOH HOH . J 8 HOH A 23 323 87 HOH HOH . J 8 HOH A 24 324 41 HOH HOH . J 8 HOH A 25 325 18 HOH HOH . J 8 HOH A 26 326 1 HOH HOH . J 8 HOH A 27 327 9 HOH HOH . J 8 HOH A 28 328 78 HOH HOH . J 8 HOH A 29 329 111 HOH HOH . J 8 HOH A 30 330 19 HOH HOH . J 8 HOH A 31 331 91 HOH HOH . J 8 HOH A 32 332 16 HOH HOH . J 8 HOH A 33 333 30 HOH HOH . J 8 HOH A 34 334 119 HOH HOH . J 8 HOH A 35 335 67 HOH HOH . J 8 HOH A 36 336 114 HOH HOH . J 8 HOH A 37 337 46 HOH HOH . J 8 HOH A 38 338 62 HOH HOH . J 8 HOH A 39 339 76 HOH HOH . J 8 HOH A 40 340 29 HOH HOH . J 8 HOH A 41 341 13 HOH HOH . J 8 HOH A 42 342 15 HOH HOH . J 8 HOH A 43 343 7 HOH HOH . J 8 HOH A 44 344 33 HOH HOH . J 8 HOH A 45 345 80 HOH HOH . J 8 HOH A 46 346 5 HOH HOH . J 8 HOH A 47 347 77 HOH HOH . J 8 HOH A 48 348 12 HOH HOH . J 8 HOH A 49 349 24 HOH HOH . J 8 HOH A 50 350 8 HOH HOH . J 8 HOH A 51 351 58 HOH HOH . J 8 HOH A 52 352 45 HOH HOH . J 8 HOH A 53 353 81 HOH HOH . J 8 HOH A 54 354 118 HOH HOH . J 8 HOH A 55 355 38 HOH HOH . J 8 HOH A 56 356 39 HOH HOH . J 8 HOH A 57 357 34 HOH HOH . J 8 HOH A 58 358 60 HOH HOH . J 8 HOH A 59 359 6 HOH HOH . J 8 HOH A 60 360 50 HOH HOH . J 8 HOH A 61 361 113 HOH HOH . J 8 HOH A 62 362 88 HOH HOH . J 8 HOH A 63 363 27 HOH HOH . J 8 HOH A 64 364 48 HOH HOH . J 8 HOH A 65 365 3 HOH HOH . J 8 HOH A 66 366 74 HOH HOH . J 8 HOH A 67 367 32 HOH HOH . J 8 HOH A 68 368 116 HOH HOH . J 8 HOH A 69 369 117 HOH HOH . J 8 HOH A 70 370 31 HOH HOH . J 8 HOH A 71 371 83 HOH HOH . J 8 HOH A 72 372 22 HOH HOH . J 8 HOH A 73 373 68 HOH HOH . J 8 HOH A 74 374 120 HOH HOH . J 8 HOH A 75 375 4 HOH HOH . J 8 HOH A 76 376 28 HOH HOH . J 8 HOH A 77 377 86 HOH HOH . J 8 HOH A 78 378 17 HOH HOH . J 8 HOH A 79 379 37 HOH HOH . J 8 HOH A 80 380 44 HOH HOH . J 8 HOH A 81 381 102 HOH HOH . J 8 HOH A 82 382 56 HOH HOH . J 8 HOH A 83 383 54 HOH HOH . J 8 HOH A 84 384 25 HOH HOH . J 8 HOH A 85 385 65 HOH HOH . J 8 HOH A 86 386 98 HOH HOH . J 8 HOH A 87 387 47 HOH HOH . J 8 HOH A 88 388 66 HOH HOH . J 8 HOH A 89 389 55 HOH HOH . J 8 HOH A 90 390 112 HOH HOH . J 8 HOH A 91 391 108 HOH HOH . J 8 HOH A 92 392 49 HOH HOH . J 8 HOH A 93 393 36 HOH HOH . J 8 HOH A 94 394 2 HOH HOH . J 8 HOH A 95 395 70 HOH HOH . J 8 HOH A 96 396 11 HOH HOH . J 8 HOH A 97 397 57 HOH HOH . J 8 HOH A 98 398 79 HOH HOH . J 8 HOH A 99 399 53 HOH HOH . J 8 HOH A 100 400 100 HOH HOH . J 8 HOH A 101 401 106 HOH HOH . J 8 HOH A 102 402 84 HOH HOH . J 8 HOH A 103 403 63 HOH HOH . J 8 HOH A 104 404 26 HOH HOH . J 8 HOH A 105 405 85 HOH HOH . J 8 HOH A 106 406 105 HOH HOH . J 8 HOH A 107 407 115 HOH HOH . J 8 HOH A 108 408 93 HOH HOH . J 8 HOH A 109 409 94 HOH HOH . J 8 HOH A 110 410 72 HOH HOH . J 8 HOH A 111 411 99 HOH HOH . J 8 HOH A 112 412 95 HOH HOH . J 8 HOH A 113 413 75 HOH HOH . J 8 HOH A 114 414 90 HOH HOH . J 8 HOH A 115 415 92 HOH HOH . J 8 HOH A 116 416 96 HOH HOH . J 8 HOH A 117 417 109 HOH HOH . J 8 HOH A 118 418 23 HOH HOH . J 8 HOH A 119 419 64 HOH HOH . J 8 HOH A 120 420 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 4ZT . . . H 6 -1.131 -4.594 2.214 1 10.59 ? N1 4ZT 207 A 1 HETATM 2 C C1 4ZT . . . H 6 -2.315 -4.768 2.945 1 9 ? C1 4ZT 207 A 1 HETATM 3 C C2 4ZT . . . H 6 -0.222 -3.668 2.424 1 11.24 ? C2 4ZT 207 A 1 HETATM 4 C C3 4ZT . . . H 6 -2.336 -6.044 3.79 1 8.08 ? C3 4ZT 207 A 1 HETATM 5 C C4 4ZT . . . H 6 -3.474 -6.86 3.731 1 8.27 ? C4 4ZT 207 A 1 HETATM 6 C C5 4ZT . . . H 6 -3.662 -7.986 4.558 1 8.45 ? C5 4ZT 207 A 1 HETATM 7 C C6 4ZT . . . H 6 -2.605 -8.321 5.459 1 7.85 ? C6 4ZT 207 A 1 HETATM 8 C C7 4ZT . . . H 6 -1.471 -7.534 5.461 1 7.57 ? C7 4ZT 207 A 1 HETATM 9 C C8 4ZT . . . H 6 -1.337 -6.391 4.677 1 7.81 ? C8 4ZT 207 A 1 HETATM 10 N N9 4ZT . . . H 6 -2.817 -9.492 6.283 1 8.46 ? N9 4ZT 207 A 1 HETATM 11 N N10 4ZT . . . H 6 -0.276 -2.771 3.395 1 11.44 ? N10 4ZT 207 A 1 HETATM 12 O O13 4ZT . . . H 6 0.66 -3.642 1.598 1 12.08 ? O13 4ZT 207 A 1 HETATM 13 C C14 4ZT . . . H 6 0.717 -1.754 3.597 1 12.73 ? C14 4ZT 207 A 1 HETATM 14 C C15 4ZT . . . H 6 1.905 -2.297 4.371 1 11.95 ? C15 4ZT 207 A 1 HETATM 15 O O16 4ZT . . . H 6 3.165 -1.781 4.104 1 11.05 ? O16 4ZT 207 A 1 HETATM 16 O O17 4ZT . . . H 6 1.84 -3.121 5.239 1 10.02 ? O17 4ZT 207 A 1 HETATM 17 C C18 4ZT . . . H 6 4.295 -2.167 4.895 1 11.95 ? C18 4ZT 207 A 1 HETATM 18 C C19 4ZT . . . H 6 5.444 -1.251 4.545 1 12.13 ? C19 4ZT 207 A 1 HETATM 19 C C20 4ZT . . . H 6 0.24 -0.587 4.469 1 17.45 ? C20 4ZT 207 A 1 HETATM 20 C C21 4ZT . . . H 6 -0.979 0.233 3.978 1 22.45 ? C21 4ZT 207 A 1 HETATM 21 S S22 4ZT . . . H 6 -1.481 1.406 5.314 1 29.08 ? S22 4ZT 207 A 1 HETATM 22 C C23 4ZT . . . H 6 -2.544 0.347 6.32 1 31.86 ? C23 4ZT 207 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 857 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 22 #