data_5CCV
#
_model_server_result.job_id            sB2VayNwOPMxQ2APM9PMEw 
_model_server_result.datetime_utc      '2024-10-12 21:23:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ccv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":1001}' 
#
_entry.id    5CCV 
#
_exptl.entry_id    5CCV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5CCV 
_cell.length_a            215.314 
_cell.length_b            215.314 
_cell.length_c            480.683 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CCV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
? monomeric 1 author_defined_assembly 7 
? monomeric 1 author_defined_assembly 8 
PISA dimeric 2 author_and_software_defined_assembly 9 
PISA dimeric 2 author_and_software_defined_assembly 10 
PISA dimeric 2 author_and_software_defined_assembly 11 
PISA dimeric 2 author_and_software_defined_assembly 12 
PISA dimeric 2 author_and_software_defined_assembly 13 
PISA dimeric 2 author_and_software_defined_assembly 14 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,I,J,K 1 1 
B,L,M,N 2 1 
C,O,P,Q 3 1 
D,R,S,T 4 1 
E,U,V,W 5 1 
F,X,Y,Z 6 1 
G,AA,BA,CA 7 1 
H,DA,EA,FA 8 1 
A,F,I,J,K,X,Y,Z 9 1 
A,B,I,J,K,L,M,N 10 1 
C,D,O,P,Q,R,S,T 11 1 
D,G,R,S,T,AA,BA,CA 12 1 
E,F,U,V,W,X,Y,Z 13 1 
G,H,AA,BA,CA,DA,EA,FA 14 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 J N N 
? 2 L N N 
? 2 M N N 
? 2 O N N 
? 2 P N N 
? 2 R N N 
? 2 S N N 
? 2 U N N 
? 2 V N N 
? 2 X N N 
? 2 Y N N 
? 2 AA N N 
? 2 BA N N 
? 2 DA N N 
? 2 EA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 437 A GLU 437 1_555 J ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc2 A NE2 HIS 441 A HIS 441 1_555 J ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? 
metalc ? metalc3 A SG CYS 446 A CYS 446 1_555 J ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
metalc ? metalc4 A SG CYS 449 A CYS 449 1_555 J ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc5 A NE2 HIS 712 A HIS 712 1_555 I ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc6 A NE2 HIS 714 A HIS 714 1_555 I ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc7 A SG CYS 728 A CYS 728 1_555 I ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc8 A SG CYS 841 A CYS 847 1_555 I ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc9 B OE1 GLU 437 B GLU 437 1_555 L ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc10 B NE2 HIS 441 B HIS 441 1_555 L ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc11 B SG CYS 446 B CYS 446 1_555 L ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc12 B SG CYS 449 B CYS 449 1_555 L ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc13 B NE2 HIS 712 B HIS 712 1_555 M ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? 
metalc ? metalc14 B NE2 HIS 714 B HIS 714 1_555 M ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
metalc ? metalc15 B SG CYS 728 B CYS 728 1_555 M ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc16 B SG CYS 841 B CYS 847 1_555 M ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc17 C OE1 GLU 437 C GLU 437 1_555 O ZN ZN . C ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc18 C NE2 HIS 441 C HIS 441 1_555 O ZN ZN . C ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc19 C SG CYS 446 C CYS 446 1_555 O ZN ZN . C ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? 
metalc ? metalc20 C SG CYS 449 C CYS 449 1_555 O ZN ZN . C ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc21 C NE2 HIS 712 C HIS 712 1_555 P ZN ZN . C ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc22 C NE2 HIS 714 C HIS 714 1_555 P ZN ZN . C ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc23 C SG CYS 728 C CYS 728 1_555 P ZN ZN . C ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc24 C SG CYS 841 C CYS 847 1_555 P ZN ZN . C ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? 
metalc ? metalc25 D OE1 GLU 437 D GLU 437 1_555 R ZN ZN . D ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc26 D NE2 HIS 441 D HIS 441 1_555 R ZN ZN . D ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc27 D SG CYS 446 D CYS 446 1_555 R ZN ZN . D ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc28 D SG CYS 449 D CYS 449 1_555 R ZN ZN . D ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc29 D NE2 HIS 712 D HIS 712 1_555 S ZN ZN . D ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
metalc ? metalc30 D NE2 HIS 714 D HIS 714 1_555 S ZN ZN . D ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc31 D SG CYS 728 D CYS 728 1_555 S ZN ZN . D ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? 
metalc ? metalc32 D SG CYS 841 D CYS 847 1_555 S ZN ZN . D ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc33 E OE1 GLU 437 E GLU 437 1_555 U ZN ZN . E ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc34 E NE2 HIS 441 E HIS 441 1_555 U ZN ZN . E ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc35 E SG CYS 446 E CYS 446 1_555 U ZN ZN . E ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? 
metalc ? metalc36 E SG CYS 449 E CYS 449 1_555 U ZN ZN . E ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc37 E NE2 HIS 712 E HIS 712 1_555 V ZN ZN . E ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
metalc ? metalc38 E NE2 HIS 714 E HIS 714 1_555 V ZN ZN . E ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc39 E SG CYS 728 E CYS 728 1_555 V ZN ZN . E ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
metalc ? metalc40 E SG CYS 841 E CYS 847 1_555 V ZN ZN . E ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc41 F OE1 GLU 437 F GLU 437 1_555 Y ZN ZN . F ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc42 F NE2 HIS 441 F HIS 441 1_555 Y ZN ZN . F ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc43 F SG CYS 446 F CYS 446 1_555 Y ZN ZN . F ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc44 F SG CYS 449 F CYS 449 1_555 Y ZN ZN . F ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc45 F NE2 HIS 712 F HIS 712 1_555 X ZN ZN . F ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? 
metalc ? metalc46 F NE2 HIS 714 F HIS 714 1_555 X ZN ZN . F ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
metalc ? metalc47 F SG CYS 728 F CYS 728 1_555 X ZN ZN . F ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc48 F SG CYS 841 F CYS 847 1_555 X ZN ZN . F ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? 
metalc ? metalc49 G OE1 GLU 437 G GLU 437 1_555 AA ZN ZN . G ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc50 G NE2 HIS 441 G HIS 441 1_555 AA ZN ZN . G ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
metalc ? metalc51 G SG CYS 446 G CYS 446 1_555 AA ZN ZN . G ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc52 G SG CYS 449 G CYS 449 1_555 AA ZN ZN . G ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc53 G NE2 HIS 712 G HIS 712 1_555 BA ZN ZN . G ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc54 G NE2 HIS 714 G HIS 714 1_555 BA ZN ZN . G ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
metalc ? metalc55 G SG CYS 728 G CYS 728 1_555 BA ZN ZN . G ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc56 G SG CYS 841 G CYS 847 1_555 BA ZN ZN . G ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc57 H NE2 HIS 441 H HIS 441 1_555 EA ZN ZN . H ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc58 H SG CYS 446 H CYS 446 1_555 EA ZN ZN . H ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? 
metalc ? metalc59 H SG CYS 449 H CYS 449 1_555 EA ZN ZN . H ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc60 H NE2 HIS 712 H HIS 712 1_555 DA ZN ZN . H ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
metalc ? metalc61 H NE2 HIS 714 H HIS 714 1_555 DA ZN ZN . H ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc62 H SG CYS 728 H CYS 728 1_555 DA ZN ZN . H ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? 
metalc ? metalc63 H SG CYS 841 H CYS 847 1_555 DA ZN ZN . H ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5CCV 
_atom_sites.fract_transf_matrix[1][1]    0.004644 
_atom_sites.fract_transf_matrix[1][2]    0.002681 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005363 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00208 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 ZN A 1 1001 9 ZN ZN . 
J 2 ZN A 1 1002 15 ZN ZN . 
K 3 SAH A 1 1003 1 SAH SAH . 
L 2 ZN B 1 1001 6 ZN ZN . 
M 2 ZN B 1 1002 12 ZN ZN . 
N 3 SAH B 1 1003 2 SAH SAH . 
O 2 ZN C 1 1001 2 ZN ZN . 
P 2 ZN C 1 1002 8 ZN ZN . 
Q 3 SAH C 1 1003 3 SAH SAH . 
R 2 ZN D 1 1001 4 ZN ZN . 
S 2 ZN D 1 1002 10 ZN ZN . 
T 3 SAH D 1 1003 4 SAH SAH . 
U 2 ZN E 1 1001 7 ZN ZN . 
V 2 ZN E 1 1002 13 ZN ZN . 
W 3 SAH E 1 1003 5 SAH SAH . 
X 2 ZN F 1 1001 1 ZN ZN . 
Y 2 ZN F 1 1002 3 ZN ZN . 
Z 3 SAH F 1 1003 6 SAH SAH . 
AA 2 ZN G 1 1001 5 ZN ZN . 
BA 2 ZN G 1 1002 11 ZN ZN . 
CA 3 SAH G 1 1003 7 SAH SAH . 
DA 2 ZN H 1 1001 14 ZN ZN . 
EA 2 ZN H 1 1002 16 ZN ZN . 
FA 3 SAH H 1 1003 8 SAH SAH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         X 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -106.852 
_atom_site.Cartn_y               34.93 
_atom_site.Cartn_z               5.476 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        84.81 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1001 
_atom_site.auth_asym_id          F 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              102 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    129 
_model_server_stats.query_time_ms           567 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#