data_5CF9 # _model_server_result.job_id XAewGy29t6c2xLx_aj12rg _model_server_result.datetime_utc '2024-10-21 05:01:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cf9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5CF9 # _exptl.entry_id 5CF9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.125 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5CF9 _cell.length_a 130.51 _cell.length_b 130.51 _cell.length_c 37.98 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CF9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H6 N2 O' _chem_comp.formula_weight 122.125 _chem_comp.id NCA _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 NCA doub 254 n y N1 C6 NCA sing 255 n y C2 C3 NCA sing 256 n y C2 H2 NCA sing 257 n n C3 C4 NCA doub 258 n y C3 C7 NCA sing 259 n n C4 C5 NCA sing 260 n y C4 H4 NCA sing 261 n n C5 C6 NCA doub 262 n y C5 H5 NCA sing 263 n n C6 H6 NCA sing 264 n n C7 O7 NCA doub 265 n n C7 N7 NCA sing 266 n n N7 HN71 NCA sing 267 n n N7 HN72 NCA sing 268 n n # _atom_sites.entry_id 5CF9 _atom_sites.fract_transf_matrix[1][1] 0.007662 _atom_sites.fract_transf_matrix[1][2] 0.004424 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG B 1 301 301 NAG NAG . C 3 NCA B 1 302 1 NCA NCA . D 4 HOH B 1 401 163 HOH HOH . D 4 HOH B 2 402 104 HOH HOH . D 4 HOH B 3 403 113 HOH HOH . D 4 HOH B 4 404 72 HOH HOH . D 4 HOH B 5 405 99 HOH HOH . D 4 HOH B 6 406 152 HOH HOH . D 4 HOH B 7 407 120 HOH HOH . D 4 HOH B 8 408 21 HOH HOH . D 4 HOH B 9 409 106 HOH HOH . D 4 HOH B 10 410 128 HOH HOH . D 4 HOH B 11 411 50 HOH HOH . D 4 HOH B 12 412 162 HOH HOH . D 4 HOH B 13 413 58 HOH HOH . D 4 HOH B 14 414 25 HOH HOH . D 4 HOH B 15 415 14 HOH HOH . D 4 HOH B 16 416 127 HOH HOH . D 4 HOH B 17 417 49 HOH HOH . D 4 HOH B 18 418 178 HOH HOH . D 4 HOH B 19 419 94 HOH HOH . D 4 HOH B 20 420 70 HOH HOH . D 4 HOH B 21 421 60 HOH HOH . D 4 HOH B 22 422 2 HOH HOH . D 4 HOH B 23 423 196 HOH HOH . D 4 HOH B 24 424 143 HOH HOH . D 4 HOH B 25 425 122 HOH HOH . D 4 HOH B 26 426 5 HOH HOH . D 4 HOH B 27 427 17 HOH HOH . D 4 HOH B 28 428 68 HOH HOH . D 4 HOH B 29 429 173 HOH HOH . D 4 HOH B 30 430 170 HOH HOH . D 4 HOH B 31 431 11 HOH HOH . D 4 HOH B 32 432 9 HOH HOH . D 4 HOH B 33 433 160 HOH HOH . D 4 HOH B 34 434 93 HOH HOH . D 4 HOH B 35 435 54 HOH HOH . D 4 HOH B 36 436 23 HOH HOH . D 4 HOH B 37 437 7 HOH HOH . D 4 HOH B 38 438 20 HOH HOH . D 4 HOH B 39 439 18 HOH HOH . D 4 HOH B 40 440 165 HOH HOH . D 4 HOH B 41 441 1 HOH HOH . D 4 HOH B 42 442 79 HOH HOH . D 4 HOH B 43 443 130 HOH HOH . D 4 HOH B 44 444 37 HOH HOH . D 4 HOH B 45 445 63 HOH HOH . D 4 HOH B 46 446 96 HOH HOH . D 4 HOH B 47 447 3 HOH HOH . D 4 HOH B 48 448 80 HOH HOH . D 4 HOH B 49 449 135 HOH HOH . D 4 HOH B 50 450 64 HOH HOH . D 4 HOH B 51 451 15 HOH HOH . D 4 HOH B 52 452 137 HOH HOH . D 4 HOH B 53 453 40 HOH HOH . D 4 HOH B 54 454 76 HOH HOH . D 4 HOH B 55 455 65 HOH HOH . D 4 HOH B 56 456 12 HOH HOH . D 4 HOH B 57 457 191 HOH HOH . D 4 HOH B 58 458 159 HOH HOH . D 4 HOH B 59 459 195 HOH HOH . D 4 HOH B 60 460 38 HOH HOH . D 4 HOH B 61 461 150 HOH HOH . D 4 HOH B 62 462 13 HOH HOH . D 4 HOH B 63 463 180 HOH HOH . D 4 HOH B 64 464 111 HOH HOH . D 4 HOH B 65 465 189 HOH HOH . D 4 HOH B 66 466 83 HOH HOH . D 4 HOH B 67 467 109 HOH HOH . D 4 HOH B 68 468 161 HOH HOH . D 4 HOH B 69 469 28 HOH HOH . D 4 HOH B 70 470 41 HOH HOH . D 4 HOH B 71 471 112 HOH HOH . D 4 HOH B 72 472 52 HOH HOH . D 4 HOH B 73 473 36 HOH HOH . D 4 HOH B 74 474 84 HOH HOH . D 4 HOH B 75 475 77 HOH HOH . D 4 HOH B 76 476 138 HOH HOH . D 4 HOH B 77 477 29 HOH HOH . D 4 HOH B 78 478 149 HOH HOH . D 4 HOH B 79 479 33 HOH HOH . D 4 HOH B 80 480 47 HOH HOH . D 4 HOH B 81 481 157 HOH HOH . D 4 HOH B 82 482 73 HOH HOH . D 4 HOH B 83 483 176 HOH HOH . D 4 HOH B 84 484 51 HOH HOH . D 4 HOH B 85 485 90 HOH HOH . D 4 HOH B 86 486 166 HOH HOH . D 4 HOH B 87 487 193 HOH HOH . D 4 HOH B 88 488 46 HOH HOH . D 4 HOH B 89 489 87 HOH HOH . D 4 HOH B 90 490 102 HOH HOH . D 4 HOH B 91 491 133 HOH HOH . D 4 HOH B 92 492 107 HOH HOH . D 4 HOH B 93 493 154 HOH HOH . D 4 HOH B 94 494 44 HOH HOH . D 4 HOH B 95 495 172 HOH HOH . D 4 HOH B 96 496 145 HOH HOH . D 4 HOH B 97 497 185 HOH HOH . D 4 HOH B 98 498 174 HOH HOH . D 4 HOH B 99 499 91 HOH HOH . D 4 HOH B 100 500 59 HOH HOH . D 4 HOH B 101 501 39 HOH HOH . D 4 HOH B 102 502 45 HOH HOH . D 4 HOH B 103 503 66 HOH HOH . D 4 HOH B 104 504 182 HOH HOH . D 4 HOH B 105 505 95 HOH HOH . D 4 HOH B 106 506 10 HOH HOH . D 4 HOH B 107 507 78 HOH HOH . D 4 HOH B 108 508 34 HOH HOH . D 4 HOH B 109 509 108 HOH HOH . D 4 HOH B 110 510 179 HOH HOH . D 4 HOH B 111 511 4 HOH HOH . D 4 HOH B 112 512 61 HOH HOH . D 4 HOH B 113 513 32 HOH HOH . D 4 HOH B 114 514 35 HOH HOH . D 4 HOH B 115 515 110 HOH HOH . D 4 HOH B 116 516 82 HOH HOH . D 4 HOH B 117 517 147 HOH HOH . D 4 HOH B 118 518 55 HOH HOH . D 4 HOH B 119 519 153 HOH HOH . D 4 HOH B 120 520 53 HOH HOH . D 4 HOH B 121 521 6 HOH HOH . D 4 HOH B 122 522 56 HOH HOH . D 4 HOH B 123 523 62 HOH HOH . D 4 HOH B 124 524 155 HOH HOH . D 4 HOH B 125 525 124 HOH HOH . D 4 HOH B 126 526 98 HOH HOH . D 4 HOH B 127 527 67 HOH HOH . D 4 HOH B 128 528 85 HOH HOH . D 4 HOH B 129 529 132 HOH HOH . D 4 HOH B 130 530 119 HOH HOH . D 4 HOH B 131 531 156 HOH HOH . D 4 HOH B 132 532 89 HOH HOH . D 4 HOH B 133 533 22 HOH HOH . D 4 HOH B 134 534 19 HOH HOH . D 4 HOH B 135 535 31 HOH HOH . D 4 HOH B 136 536 75 HOH HOH . D 4 HOH B 137 537 188 HOH HOH . D 4 HOH B 138 538 71 HOH HOH . D 4 HOH B 139 539 136 HOH HOH . D 4 HOH B 140 540 141 HOH HOH . D 4 HOH B 141 541 8 HOH HOH . D 4 HOH B 142 542 123 HOH HOH . D 4 HOH B 143 543 30 HOH HOH . D 4 HOH B 144 544 184 HOH HOH . D 4 HOH B 145 545 203 HOH HOH . D 4 HOH B 146 546 103 HOH HOH . D 4 HOH B 147 547 199 HOH HOH . D 4 HOH B 148 548 202 HOH HOH . D 4 HOH B 149 549 192 HOH HOH . D 4 HOH B 150 550 42 HOH HOH . D 4 HOH B 151 551 194 HOH HOH . D 4 HOH B 152 552 151 HOH HOH . D 4 HOH B 153 553 200 HOH HOH . D 4 HOH B 154 554 171 HOH HOH . D 4 HOH B 155 555 16 HOH HOH . D 4 HOH B 156 556 24 HOH HOH . D 4 HOH B 157 557 81 HOH HOH . D 4 HOH B 158 558 140 HOH HOH . D 4 HOH B 159 559 115 HOH HOH . D 4 HOH B 160 560 144 HOH HOH . D 4 HOH B 161 561 134 HOH HOH . D 4 HOH B 162 562 187 HOH HOH . D 4 HOH B 163 563 43 HOH HOH . D 4 HOH B 164 564 97 HOH HOH . D 4 HOH B 165 565 92 HOH HOH . D 4 HOH B 166 566 57 HOH HOH . D 4 HOH B 167 567 201 HOH HOH . D 4 HOH B 168 568 190 HOH HOH . D 4 HOH B 169 569 88 HOH HOH . D 4 HOH B 170 570 118 HOH HOH . D 4 HOH B 171 571 177 HOH HOH . D 4 HOH B 172 572 158 HOH HOH . D 4 HOH B 173 573 126 HOH HOH . D 4 HOH B 174 574 164 HOH HOH . D 4 HOH B 175 575 168 HOH HOH . D 4 HOH B 176 576 48 HOH HOH . D 4 HOH B 177 577 116 HOH HOH . D 4 HOH B 178 578 86 HOH HOH . D 4 HOH B 179 579 121 HOH HOH . D 4 HOH B 180 580 131 HOH HOH . D 4 HOH B 181 581 101 HOH HOH . D 4 HOH B 182 582 117 HOH HOH . D 4 HOH B 183 583 183 HOH HOH . D 4 HOH B 184 584 142 HOH HOH . D 4 HOH B 185 585 198 HOH HOH . D 4 HOH B 186 586 26 HOH HOH . D 4 HOH B 187 587 27 HOH HOH . D 4 HOH B 188 588 125 HOH HOH . D 4 HOH B 189 589 69 HOH HOH . D 4 HOH B 190 590 169 HOH HOH . D 4 HOH B 191 591 129 HOH HOH . D 4 HOH B 192 592 100 HOH HOH . D 4 HOH B 193 593 105 HOH HOH . D 4 HOH B 194 594 139 HOH HOH . D 4 HOH B 195 595 197 HOH HOH . D 4 HOH B 196 596 175 HOH HOH . D 4 HOH B 197 597 74 HOH HOH . D 4 HOH B 198 598 167 HOH HOH . D 4 HOH B 199 599 146 HOH HOH . D 4 HOH B 200 600 186 HOH HOH . D 4 HOH B 201 601 114 HOH HOH . D 4 HOH B 202 602 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 NCA . . . C 3 -18.103 14.862 13.033 1 29.72 ? N1 NCA 302 B 1 HETATM 2 C C2 NCA . . . C 3 -17.432 15.179 14.148 1 29.28 ? C2 NCA 302 B 1 HETATM 3 C C3 NCA . . . C 3 -16.042 15.239 14.234 1 26.28 ? C3 NCA 302 B 1 HETATM 4 C C4 NCA . . . C 3 -15.327 14.924 13.09 1 26.09 ? C4 NCA 302 B 1 HETATM 5 C C5 NCA . . . C 3 -15.992 14.587 11.92 1 25.5 ? C5 NCA 302 B 1 HETATM 6 C C6 NCA . . . C 3 -17.368 14.574 11.939 1 27.38 ? C6 NCA 302 B 1 HETATM 7 C C7 NCA . . . C 3 -15.39 15.588 15.488 1 25.27 ? C7 NCA 302 B 1 HETATM 8 O O7 NCA . . . C 3 -15.945 15.41 16.536 1 27.6 ? O7 NCA 302 B 1 HETATM 9 N N7 NCA . . . C 3 -14.105 16.116 15.445 1 26.75 ? N7 NCA 302 B 1 HETATM 10 H H2 NCA . . . C 3 -18.084 15.414 15.02 1 35.14 ? H2 NCA 302 B 1 HETATM 11 H H4 NCA . . . C 3 -14.215 14.944 13.087 1 31.3 ? H4 NCA 302 B 1 HETATM 12 H H5 NCA . . . C 3 -15.445 14.343 10.996 1 30.6 ? H5 NCA 302 B 1 HETATM 13 H H6 NCA . . . C 3 -17.955 14.307 11.025 1 32.86 ? H6 NCA 302 B 1 HETATM 14 H HN71 NCA . . . C 3 -13.661 16.252 14.547 1 32.1 ? HN71 NCA 302 B 1 HETATM 15 H HN72 NCA . . . C 3 -13.567 16.388 16.241 1 32.1 ? HN72 NCA 302 B 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 431 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #