data_5CFV # _model_server_result.job_id TObDs3FRh5Z35LvmOWl1zw _model_server_result.datetime_utc '2024-11-05 00:34:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cfv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1207}' # _entry.id 5CFV # _exptl.entry_id 5CFV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.52 _cell.angle_gamma 90 _cell.entry_id 5CFV _cell.length_a 173.883 _cell.length_b 55.334 _cell.length_c 49.67 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CFV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B GLC 1 B 1 GLC A 486 MAL 2 n B GLC 2 B 2 GLC A 486 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 405 A CYS 1056 1_555 A SG CYS 435 A CYS 1086 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? covale ? covale1 B O4 GLC . B GLC 1 1_555 B C1 GLC . B GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 sing metalc ? metalc1 A OD1 ASP 121 A ASP 120 1_555 H MG MG . A MG 1207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc2 H MG MG . A MG 1207 1_555 I O HOH . A HOH 1302 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc3 H MG MG . A MG 1207 1_555 I O HOH . A HOH 1306 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc4 H MG MG . A MG 1207 1_555 I O HOH . A HOH 1352 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc5 H MG MG . A MG 1207 1_555 I O HOH . A HOH 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc6 H MG MG . A MG 1207 1_555 I O HOH . A HOH 1426 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? metalc ? metalc7 H MG MG . A MG 1207 1_555 I O HOH . A HOH 1451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5CFV _atom_sites.fract_transf_matrix[1][1] 0.005751 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000153 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018072 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MPD A 1 1202 487 MPD MPD . D 4 GOL A 1 1203 488 GOL GOL . E 4 GOL A 1 1204 489 GOL GOL . F 4 GOL A 1 1205 490 GOL GOL . G 5 MG A 1 1206 491 MG MG . H 5 MG A 1 1207 492 MG MG . I 6 HOH A 1 1301 565 HOH HOH . I 6 HOH A 2 1302 629 HOH HOH . I 6 HOH A 3 1303 575 HOH HOH . I 6 HOH A 4 1304 612 HOH HOH . I 6 HOH A 5 1305 722 HOH HOH . I 6 HOH A 6 1306 580 HOH HOH . I 6 HOH A 7 1307 610 HOH HOH . I 6 HOH A 8 1308 658 HOH HOH . I 6 HOH A 9 1309 723 HOH HOH . I 6 HOH A 10 1310 729 HOH HOH . I 6 HOH A 11 1311 714 HOH HOH . I 6 HOH A 12 1312 691 HOH HOH . I 6 HOH A 13 1313 545 HOH HOH . I 6 HOH A 14 1314 518 HOH HOH . I 6 HOH A 15 1315 669 HOH HOH . I 6 HOH A 16 1316 521 HOH HOH . I 6 HOH A 17 1317 582 HOH HOH . I 6 HOH A 18 1318 650 HOH HOH . I 6 HOH A 19 1319 639 HOH HOH . I 6 HOH A 20 1320 642 HOH HOH . I 6 HOH A 21 1321 605 HOH HOH . I 6 HOH A 22 1322 643 HOH HOH . I 6 HOH A 23 1323 727 HOH HOH . I 6 HOH A 24 1324 641 HOH HOH . I 6 HOH A 25 1325 557 HOH HOH . I 6 HOH A 26 1326 670 HOH HOH . I 6 HOH A 27 1327 624 HOH HOH . I 6 HOH A 28 1328 548 HOH HOH . I 6 HOH A 29 1329 520 HOH HOH . I 6 HOH A 30 1330 539 HOH HOH . I 6 HOH A 31 1331 529 HOH HOH . I 6 HOH A 32 1332 572 HOH HOH . I 6 HOH A 33 1333 665 HOH HOH . I 6 HOH A 34 1334 621 HOH HOH . I 6 HOH A 35 1335 532 HOH HOH . I 6 HOH A 36 1336 609 HOH HOH . I 6 HOH A 37 1337 626 HOH HOH . I 6 HOH A 38 1338 498 HOH HOH . I 6 HOH A 39 1339 607 HOH HOH . I 6 HOH A 40 1340 494 HOH HOH . I 6 HOH A 41 1341 511 HOH HOH . I 6 HOH A 42 1342 507 HOH HOH . I 6 HOH A 43 1343 613 HOH HOH . I 6 HOH A 44 1344 647 HOH HOH . I 6 HOH A 45 1345 654 HOH HOH . I 6 HOH A 46 1346 662 HOH HOH . I 6 HOH A 47 1347 514 HOH HOH . I 6 HOH A 48 1348 581 HOH HOH . I 6 HOH A 49 1349 538 HOH HOH . I 6 HOH A 50 1350 536 HOH HOH . I 6 HOH A 51 1351 568 HOH HOH . I 6 HOH A 52 1352 535 HOH HOH . I 6 HOH A 53 1353 632 HOH HOH . I 6 HOH A 54 1354 553 HOH HOH . I 6 HOH A 55 1355 680 HOH HOH . I 6 HOH A 56 1356 509 HOH HOH . I 6 HOH A 57 1357 564 HOH HOH . I 6 HOH A 58 1358 598 HOH HOH . I 6 HOH A 59 1359 573 HOH HOH . I 6 HOH A 60 1360 672 HOH HOH . I 6 HOH A 61 1361 616 HOH HOH . I 6 HOH A 62 1362 497 HOH HOH . I 6 HOH A 63 1363 597 HOH HOH . I 6 HOH A 64 1364 503 HOH HOH . I 6 HOH A 65 1365 664 HOH HOH . I 6 HOH A 66 1366 527 HOH HOH . I 6 HOH A 67 1367 510 HOH HOH . I 6 HOH A 68 1368 584 HOH HOH . I 6 HOH A 69 1369 615 HOH HOH . I 6 HOH A 70 1370 634 HOH HOH . I 6 HOH A 71 1371 526 HOH HOH . I 6 HOH A 72 1372 517 HOH HOH . I 6 HOH A 73 1373 561 HOH HOH . I 6 HOH A 74 1374 537 HOH HOH . I 6 HOH A 75 1375 528 HOH HOH . I 6 HOH A 76 1376 530 HOH HOH . I 6 HOH A 77 1377 495 HOH HOH . I 6 HOH A 78 1378 556 HOH HOH . I 6 HOH A 79 1379 516 HOH HOH . I 6 HOH A 80 1380 599 HOH HOH . I 6 HOH A 81 1381 637 HOH HOH . I 6 HOH A 82 1382 558 HOH HOH . I 6 HOH A 83 1383 547 HOH HOH . I 6 HOH A 84 1384 523 HOH HOH . I 6 HOH A 85 1385 648 HOH HOH . I 6 HOH A 86 1386 668 HOH HOH . I 6 HOH A 87 1387 531 HOH HOH . I 6 HOH A 88 1388 660 HOH HOH . I 6 HOH A 89 1389 678 HOH HOH . I 6 HOH A 90 1390 604 HOH HOH . I 6 HOH A 91 1391 571 HOH HOH . I 6 HOH A 92 1392 679 HOH HOH . I 6 HOH A 93 1393 603 HOH HOH . I 6 HOH A 94 1394 683 HOH HOH . I 6 HOH A 95 1395 504 HOH HOH . I 6 HOH A 96 1396 666 HOH HOH . I 6 HOH A 97 1397 493 HOH HOH . I 6 HOH A 98 1398 671 HOH HOH . I 6 HOH A 99 1399 601 HOH HOH . I 6 HOH A 100 1400 501 HOH HOH . I 6 HOH A 101 1401 619 HOH HOH . I 6 HOH A 102 1402 574 HOH HOH . I 6 HOH A 103 1403 541 HOH HOH . I 6 HOH A 104 1404 633 HOH HOH . I 6 HOH A 105 1405 499 HOH HOH . I 6 HOH A 106 1406 515 HOH HOH . I 6 HOH A 107 1407 519 HOH HOH . I 6 HOH A 108 1408 627 HOH HOH . I 6 HOH A 109 1409 533 HOH HOH . I 6 HOH A 110 1410 689 HOH HOH . I 6 HOH A 111 1411 636 HOH HOH . I 6 HOH A 112 1412 544 HOH HOH . I 6 HOH A 113 1413 617 HOH HOH . I 6 HOH A 114 1414 630 HOH HOH . I 6 HOH A 115 1415 505 HOH HOH . I 6 HOH A 116 1416 635 HOH HOH . I 6 HOH A 117 1417 500 HOH HOH . I 6 HOH A 118 1418 707 HOH HOH . I 6 HOH A 119 1419 496 HOH HOH . I 6 HOH A 120 1420 596 HOH HOH . I 6 HOH A 121 1421 649 HOH HOH . I 6 HOH A 122 1422 618 HOH HOH . I 6 HOH A 123 1423 715 HOH HOH . I 6 HOH A 124 1424 655 HOH HOH . I 6 HOH A 125 1425 698 HOH HOH . I 6 HOH A 126 1426 543 HOH HOH . I 6 HOH A 127 1427 661 HOH HOH . I 6 HOH A 128 1428 588 HOH HOH . I 6 HOH A 129 1429 628 HOH HOH . I 6 HOH A 130 1430 578 HOH HOH . I 6 HOH A 131 1431 585 HOH HOH . I 6 HOH A 132 1432 586 HOH HOH . I 6 HOH A 133 1433 640 HOH HOH . I 6 HOH A 134 1434 690 HOH HOH . I 6 HOH A 135 1435 513 HOH HOH . I 6 HOH A 136 1436 667 HOH HOH . I 6 HOH A 137 1437 583 HOH HOH . I 6 HOH A 138 1438 508 HOH HOH . I 6 HOH A 139 1439 645 HOH HOH . I 6 HOH A 140 1440 687 HOH HOH . I 6 HOH A 141 1441 524 HOH HOH . I 6 HOH A 142 1442 591 HOH HOH . I 6 HOH A 143 1443 663 HOH HOH . I 6 HOH A 144 1444 570 HOH HOH . I 6 HOH A 145 1445 567 HOH HOH . I 6 HOH A 146 1446 550 HOH HOH . I 6 HOH A 147 1447 560 HOH HOH . I 6 HOH A 148 1448 651 HOH HOH . I 6 HOH A 149 1449 546 HOH HOH . I 6 HOH A 150 1450 549 HOH HOH . I 6 HOH A 151 1451 594 HOH HOH . I 6 HOH A 152 1452 625 HOH HOH . I 6 HOH A 153 1453 592 HOH HOH . I 6 HOH A 154 1454 554 HOH HOH . I 6 HOH A 155 1455 622 HOH HOH . I 6 HOH A 156 1456 688 HOH HOH . I 6 HOH A 157 1457 692 HOH HOH . I 6 HOH A 158 1458 646 HOH HOH . I 6 HOH A 159 1459 506 HOH HOH . I 6 HOH A 160 1460 577 HOH HOH . I 6 HOH A 161 1461 540 HOH HOH . I 6 HOH A 162 1462 684 HOH HOH . I 6 HOH A 163 1463 562 HOH HOH . I 6 HOH A 164 1464 620 HOH HOH . I 6 HOH A 165 1465 602 HOH HOH . I 6 HOH A 166 1466 502 HOH HOH . I 6 HOH A 167 1467 525 HOH HOH . I 6 HOH A 168 1468 686 HOH HOH . I 6 HOH A 169 1469 551 HOH HOH . I 6 HOH A 170 1470 542 HOH HOH . I 6 HOH A 171 1471 576 HOH HOH . I 6 HOH A 172 1472 720 HOH HOH . I 6 HOH A 173 1473 512 HOH HOH . I 6 HOH A 174 1474 593 HOH HOH . I 6 HOH A 175 1475 653 HOH HOH . I 6 HOH A 176 1476 606 HOH HOH . I 6 HOH A 177 1477 675 HOH HOH . I 6 HOH A 178 1478 611 HOH HOH . I 6 HOH A 179 1479 608 HOH HOH . I 6 HOH A 180 1480 623 HOH HOH . I 6 HOH A 181 1481 589 HOH HOH . I 6 HOH A 182 1482 590 HOH HOH . I 6 HOH A 183 1483 706 HOH HOH . I 6 HOH A 184 1484 694 HOH HOH . I 6 HOH A 185 1485 681 HOH HOH . I 6 HOH A 186 1486 693 HOH HOH . I 6 HOH A 187 1487 552 HOH HOH . I 6 HOH A 188 1488 555 HOH HOH . I 6 HOH A 189 1489 534 HOH HOH . I 6 HOH A 190 1490 705 HOH HOH . I 6 HOH A 191 1491 708 HOH HOH . I 6 HOH A 192 1492 569 HOH HOH . I 6 HOH A 193 1493 559 HOH HOH . I 6 HOH A 194 1494 595 HOH HOH . I 6 HOH A 195 1495 657 HOH HOH . I 6 HOH A 196 1496 579 HOH HOH . I 6 HOH A 197 1497 700 HOH HOH . I 6 HOH A 198 1498 682 HOH HOH . I 6 HOH A 199 1499 725 HOH HOH . I 6 HOH A 200 1500 656 HOH HOH . I 6 HOH A 201 1501 702 HOH HOH . I 6 HOH A 202 1502 587 HOH HOH . I 6 HOH A 203 1503 716 HOH HOH . I 6 HOH A 204 1504 566 HOH HOH . I 6 HOH A 205 1505 730 HOH HOH . I 6 HOH A 206 1506 726 HOH HOH . I 6 HOH A 207 1507 638 HOH HOH . I 6 HOH A 208 1508 614 HOH HOH . I 6 HOH A 209 1509 713 HOH HOH . I 6 HOH A 210 1510 721 HOH HOH . I 6 HOH A 211 1511 701 HOH HOH . I 6 HOH A 212 1512 712 HOH HOH . I 6 HOH A 213 1513 718 HOH HOH . I 6 HOH A 214 1514 717 HOH HOH . I 6 HOH A 215 1515 673 HOH HOH . I 6 HOH A 216 1516 719 HOH HOH . I 6 HOH A 217 1517 677 HOH HOH . I 6 HOH A 218 1518 711 HOH HOH . I 6 HOH A 219 1519 676 HOH HOH . I 6 HOH A 220 1520 659 HOH HOH . I 6 HOH A 221 1521 710 HOH HOH . I 6 HOH A 222 1522 674 HOH HOH . I 6 HOH A 223 1523 695 HOH HOH . I 6 HOH A 224 1524 697 HOH HOH . I 6 HOH A 225 1525 696 HOH HOH . I 6 HOH A 226 1526 703 HOH HOH . I 6 HOH A 227 1527 644 HOH HOH . I 6 HOH A 228 1528 563 HOH HOH . I 6 HOH A 229 1529 699 HOH HOH . I 6 HOH A 230 1530 652 HOH HOH . I 6 HOH A 231 1531 685 HOH HOH . I 6 HOH A 232 1532 728 HOH HOH . I 6 HOH A 233 1533 522 HOH HOH . I 6 HOH A 234 1534 724 HOH HOH . I 6 HOH A 235 1535 600 HOH HOH . I 6 HOH A 236 1536 631 HOH HOH . I 6 HOH A 237 1537 704 HOH HOH . I 6 HOH A 238 1538 709 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x -38.047 _atom_site.Cartn_y 17.088 _atom_site.Cartn_z -12.696 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1207 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #