data_5CGC # _model_server_result.job_id 4WV6k3vsZkwo0wzR-yS8EA _model_server_result.datetime_utc '2024-10-28 02:24:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cgc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":4003}' # _entry.id 5CGC # _exptl.entry_id 5CGC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.2 _cell.angle_gamma 90 _cell.entry_id 5CGC _cell.length_a 143.021 _cell.length_b 43.818 _cell.length_c 81.617 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CGC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 79 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 644 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 328 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 733 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.03 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 292 n n C1 O2 OLA sing 293 n n C1 C2 OLA sing 294 n n O2 HO2 OLA sing 295 n n C2 C3 OLA sing 296 n n C2 H21 OLA sing 297 n n C2 H22 OLA sing 298 n n C3 C4 OLA sing 299 n n C3 H31 OLA sing 300 n n C3 H32 OLA sing 301 n n C4 C5 OLA sing 302 n n C4 H41 OLA sing 303 n n C4 H42 OLA sing 304 n n C5 C6 OLA sing 305 n n C5 H51 OLA sing 306 n n C5 H52 OLA sing 307 n n C6 C7 OLA sing 308 n n C6 H61 OLA sing 309 n n C6 H62 OLA sing 310 n n C7 C8 OLA sing 311 n n C7 H71 OLA sing 312 n n C7 H72 OLA sing 313 n n C8 C9 OLA sing 314 n n C8 H81 OLA sing 315 n n C8 H82 OLA sing 316 n n C9 C10 OLA doub 317 z n C9 H9 OLA sing 318 n n C10 C11 OLA sing 319 n n C10 H10 OLA sing 320 n n C11 C12 OLA sing 321 n n C11 H111 OLA sing 322 n n C11 H112 OLA sing 323 n n C12 C13 OLA sing 324 n n C12 H121 OLA sing 325 n n C12 H122 OLA sing 326 n n C13 C14 OLA sing 327 n n C13 H131 OLA sing 328 n n C13 H132 OLA sing 329 n n C14 C15 OLA sing 330 n n C14 H141 OLA sing 331 n n C14 H142 OLA sing 332 n n C15 C16 OLA sing 333 n n C15 H151 OLA sing 334 n n C15 H152 OLA sing 335 n n C16 C17 OLA sing 336 n n C16 H161 OLA sing 337 n n C16 H162 OLA sing 338 n n C17 C18 OLA sing 339 n n C17 H171 OLA sing 340 n n C17 H172 OLA sing 341 n n C18 H181 OLA sing 342 n n C18 H182 OLA sing 343 n n C18 H183 OLA sing 344 n n # _atom_sites.entry_id 5CGC _atom_sites.fract_transf_matrix[1][1] 0.006992 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001132 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022822 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLA A 1 4001 4001 OLA OLA . C 2 OLA A 1 4002 4002 OLA OLA . D 2 OLA A 1 4003 4003 OLA OLA . E 2 OLA A 1 4004 4004 OLA OLA . F 3 MES A 1 4005 4006 MES MES . G 4 51D A 1 4006 911 51D 135 . H 5 HOH A 1 4101 36 HOH HOH . H 5 HOH A 2 4102 28 HOH HOH . H 5 HOH A 3 4103 41 HOH HOH . H 5 HOH A 4 4104 25 HOH HOH . H 5 HOH A 5 4105 47 HOH HOH . H 5 HOH A 6 4106 45 HOH HOH . H 5 HOH A 7 4107 33 HOH HOH . H 5 HOH A 8 4108 18 HOH HOH . H 5 HOH A 9 4109 38 HOH HOH . H 5 HOH A 10 4110 53 HOH HOH . H 5 HOH A 11 4111 14 HOH HOH . H 5 HOH A 12 4112 12 HOH HOH . H 5 HOH A 13 4113 6 HOH HOH . H 5 HOH A 14 4114 39 HOH HOH . H 5 HOH A 15 4115 50 HOH HOH . H 5 HOH A 16 4116 22 HOH HOH . H 5 HOH A 17 4117 42 HOH HOH . H 5 HOH A 18 4118 1 HOH HOH . H 5 HOH A 19 4119 5 HOH HOH . H 5 HOH A 20 4120 58 HOH HOH . H 5 HOH A 21 4121 13 HOH HOH . H 5 HOH A 22 4122 31 HOH HOH . H 5 HOH A 23 4123 48 HOH HOH . H 5 HOH A 24 4124 11 HOH HOH . H 5 HOH A 25 4125 10 HOH HOH . H 5 HOH A 26 4126 2 HOH HOH . H 5 HOH A 27 4127 26 HOH HOH . H 5 HOH A 28 4128 32 HOH HOH . H 5 HOH A 29 4129 24 HOH HOH . H 5 HOH A 30 4130 9 HOH HOH . H 5 HOH A 31 4131 35 HOH HOH . H 5 HOH A 32 4132 4 HOH HOH . H 5 HOH A 33 4133 17 HOH HOH . H 5 HOH A 34 4134 30 HOH HOH . H 5 HOH A 35 4135 8 HOH HOH . H 5 HOH A 36 4136 7 HOH HOH . H 5 HOH A 37 4137 19 HOH HOH . H 5 HOH A 38 4138 16 HOH HOH . H 5 HOH A 39 4139 49 HOH HOH . H 5 HOH A 40 4140 37 HOH HOH . H 5 HOH A 41 4141 60 HOH HOH . H 5 HOH A 42 4142 44 HOH HOH . H 5 HOH A 43 4143 3 HOH HOH . H 5 HOH A 44 4144 46 HOH HOH . H 5 HOH A 45 4145 43 HOH HOH . H 5 HOH A 46 4146 27 HOH HOH . H 5 HOH A 47 4147 34 HOH HOH . H 5 HOH A 48 4148 40 HOH HOH . H 5 HOH A 49 4149 56 HOH HOH . H 5 HOH A 50 4150 23 HOH HOH . H 5 HOH A 51 4151 51 HOH HOH . H 5 HOH A 52 4152 57 HOH HOH . H 5 HOH A 53 4153 20 HOH HOH . H 5 HOH A 54 4154 55 HOH HOH . H 5 HOH A 55 4155 21 HOH HOH . H 5 HOH A 56 4156 29 HOH HOH . H 5 HOH A 57 4157 59 HOH HOH . H 5 HOH A 58 4158 52 HOH HOH . H 5 HOH A 59 4159 54 HOH HOH . H 5 HOH A 60 4160 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . D 2 -10.861 2.499 55.988 1 66.41 ? C1 OLA 4003 A 1 HETATM 2 O O1 OLA . . . D 2 -9.655 2.334 55.811 1 61.32 ? O1 OLA 4003 A 1 HETATM 3 O O2 OLA . . . D 2 -11.32 2.722 57.109 1 60.15 ? O2 OLA 4003 A 1 HETATM 4 C C2 OLA . . . D 2 -11.796 2.432 54.816 1 59.87 ? C2 OLA 4003 A 1 HETATM 5 C C3 OLA . . . D 2 -11.155 1.774 53.605 1 48.73 ? C3 OLA 4003 A 1 HETATM 6 C C4 OLA . . . D 2 -11.798 2.173 52.281 1 58.27 ? C4 OLA 4003 A 1 HETATM 7 C C5 OLA . . . D 2 -12.741 1.089 51.794 1 63.41 ? C5 OLA 4003 A 1 HETATM 8 C C6 OLA . . . D 2 -13.854 1.633 50.918 1 61.34 ? C6 OLA 4003 A 1 HETATM 9 C C7 OLA . . . D 2 -13.968 0.793 49.662 1 68.48 ? C7 OLA 4003 A 1 HETATM 10 C C8 OLA . . . D 2 -15.373 0.717 49.093 1 70.39 ? C8 OLA 4003 A 1 HETATM 11 C C9 OLA . . . D 2 -15.318 1.366 47.746 1 61.45 ? C9 OLA 4003 A 1 HETATM 12 C C10 OLA . . . D 2 -16.235 1.166 46.799 1 76.44 ? C10 OLA 4003 A 1 HETATM 13 C C11 OLA . . . D 2 -17.522 0.445 47.041 1 82.99 ? C11 OLA 4003 A 1 HETATM 14 C C12 OLA . . . D 2 -18.688 1.326 46.614 1 61.89 ? C12 OLA 4003 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #