data_5CHP # _model_server_result.job_id 6K2BNKgeSl7acpvHJeZx6Q _model_server_result.datetime_utc '2024-11-13 13:54:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5chp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5CHP # _exptl.entry_id 5CHP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 217.202 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-[(3-hydroxy-5-oxo-4,5-dihydro-1,2,4-triazin-6-yl)sulfanyl]propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CHP _cell.length_a 110.58 _cell.length_b 110.58 _cell.length_c 122.96 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H7 N3 O4 S' _chem_comp.formula_weight 217.202 _chem_comp.id 51Q _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-[(3-hydroxy-5-oxo-4,5-dihydro-1,2,4-triazin-6-yl)sulfanyl]propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms TyC5-03 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C3 51Q sing 1 n n C3 C4 51Q sing 2 n n C3 S 51Q sing 3 n n O3 C4 51Q doub 4 n n N N1 51Q sing 5 n n N C 51Q doub 6 n n C4 O2 51Q sing 7 n n S C 51Q sing 8 n n N1 C1 51Q doub 9 n n C C2 51Q sing 10 n n C1 O 51Q sing 11 n n C1 N2 51Q sing 12 n n C2 O1 51Q doub 13 n n C2 N2 51Q sing 14 n n O2 H1 51Q sing 15 n n C3 H2 51Q sing 16 n n C5 H3 51Q sing 17 n n C5 H4 51Q sing 18 n n C5 H5 51Q sing 19 n n N2 H6 51Q sing 20 n n O H8 51Q sing 21 n n # _atom_sites.entry_id 5CHP _atom_sites.fract_transf_matrix[1][1] 0.009043 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009043 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008133 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 301 218 FAD FAD . C 3 51Q A 1 302 219 51Q tyc . D 4 HOH A 1 401 412 HOH HOH . D 4 HOH A 2 402 234 HOH HOH . D 4 HOH A 3 403 287 HOH HOH . D 4 HOH A 4 404 387 HOH HOH . D 4 HOH A 5 405 427 HOH HOH . D 4 HOH A 6 406 388 HOH HOH . D 4 HOH A 7 407 297 HOH HOH . D 4 HOH A 8 408 352 HOH HOH . D 4 HOH A 9 409 361 HOH HOH . D 4 HOH A 10 410 318 HOH HOH . D 4 HOH A 11 411 303 HOH HOH . D 4 HOH A 12 412 416 HOH HOH . D 4 HOH A 13 413 342 HOH HOH . D 4 HOH A 14 414 376 HOH HOH . D 4 HOH A 15 415 317 HOH HOH . D 4 HOH A 16 416 275 HOH HOH . D 4 HOH A 17 417 402 HOH HOH . D 4 HOH A 18 418 393 HOH HOH . D 4 HOH A 19 419 347 HOH HOH . D 4 HOH A 20 420 231 HOH HOH . D 4 HOH A 21 421 289 HOH HOH . D 4 HOH A 22 422 381 HOH HOH . D 4 HOH A 23 423 373 HOH HOH . D 4 HOH A 24 424 281 HOH HOH . D 4 HOH A 25 425 288 HOH HOH . D 4 HOH A 26 426 332 HOH HOH . D 4 HOH A 27 427 244 HOH HOH . D 4 HOH A 28 428 354 HOH HOH . D 4 HOH A 29 429 304 HOH HOH . D 4 HOH A 30 430 405 HOH HOH . D 4 HOH A 31 431 374 HOH HOH . D 4 HOH A 32 432 371 HOH HOH . D 4 HOH A 33 433 403 HOH HOH . D 4 HOH A 34 434 282 HOH HOH . D 4 HOH A 35 435 341 HOH HOH . D 4 HOH A 36 436 358 HOH HOH . D 4 HOH A 37 437 296 HOH HOH . D 4 HOH A 38 438 406 HOH HOH . D 4 HOH A 39 439 306 HOH HOH . D 4 HOH A 40 440 398 HOH HOH . D 4 HOH A 41 441 236 HOH HOH . D 4 HOH A 42 442 277 HOH HOH . D 4 HOH A 43 443 399 HOH HOH . D 4 HOH A 44 444 292 HOH HOH . D 4 HOH A 45 445 290 HOH HOH . D 4 HOH A 46 446 384 HOH HOH . D 4 HOH A 47 447 235 HOH HOH . D 4 HOH A 48 448 260 HOH HOH . D 4 HOH A 49 449 301 HOH HOH . D 4 HOH A 50 450 322 HOH HOH . D 4 HOH A 51 451 425 HOH HOH . D 4 HOH A 52 452 237 HOH HOH . D 4 HOH A 53 453 370 HOH HOH . D 4 HOH A 54 454 302 HOH HOH . D 4 HOH A 55 455 344 HOH HOH . D 4 HOH A 56 456 228 HOH HOH . D 4 HOH A 57 457 263 HOH HOH . D 4 HOH A 58 458 395 HOH HOH . D 4 HOH A 59 459 357 HOH HOH . D 4 HOH A 60 460 315 HOH HOH . D 4 HOH A 61 461 223 HOH HOH . D 4 HOH A 62 462 350 HOH HOH . D 4 HOH A 63 463 313 HOH HOH . D 4 HOH A 64 464 356 HOH HOH . D 4 HOH A 65 465 274 HOH HOH . D 4 HOH A 66 466 241 HOH HOH . D 4 HOH A 67 467 325 HOH HOH . D 4 HOH A 68 468 283 HOH HOH . D 4 HOH A 69 469 360 HOH HOH . D 4 HOH A 70 470 337 HOH HOH . D 4 HOH A 71 471 401 HOH HOH . D 4 HOH A 72 472 229 HOH HOH . D 4 HOH A 73 473 254 HOH HOH . D 4 HOH A 74 474 280 HOH HOH . D 4 HOH A 75 475 259 HOH HOH . D 4 HOH A 76 476 346 HOH HOH . D 4 HOH A 77 477 221 HOH HOH . D 4 HOH A 78 478 232 HOH HOH . D 4 HOH A 79 479 333 HOH HOH . D 4 HOH A 80 480 264 HOH HOH . D 4 HOH A 81 481 245 HOH HOH . D 4 HOH A 82 482 305 HOH HOH . D 4 HOH A 83 483 224 HOH HOH . D 4 HOH A 84 484 326 HOH HOH . D 4 HOH A 85 485 256 HOH HOH . D 4 HOH A 86 486 238 HOH HOH . D 4 HOH A 87 487 400 HOH HOH . D 4 HOH A 88 488 394 HOH HOH . D 4 HOH A 89 489 336 HOH HOH . D 4 HOH A 90 490 418 HOH HOH . D 4 HOH A 91 491 362 HOH HOH . D 4 HOH A 92 492 383 HOH HOH . D 4 HOH A 93 493 338 HOH HOH . D 4 HOH A 94 494 250 HOH HOH . D 4 HOH A 95 495 262 HOH HOH . D 4 HOH A 96 496 253 HOH HOH . D 4 HOH A 97 497 266 HOH HOH . D 4 HOH A 98 498 411 HOH HOH . D 4 HOH A 99 499 222 HOH HOH . D 4 HOH A 100 500 270 HOH HOH . D 4 HOH A 101 501 251 HOH HOH . D 4 HOH A 102 502 240 HOH HOH . D 4 HOH A 103 503 299 HOH HOH . D 4 HOH A 104 504 311 HOH HOH . D 4 HOH A 105 505 316 HOH HOH . D 4 HOH A 106 506 284 HOH HOH . D 4 HOH A 107 507 359 HOH HOH . D 4 HOH A 108 508 379 HOH HOH . D 4 HOH A 109 509 242 HOH HOH . D 4 HOH A 110 510 365 HOH HOH . D 4 HOH A 111 511 335 HOH HOH . D 4 HOH A 112 512 220 HOH HOH . D 4 HOH A 113 513 268 HOH HOH . D 4 HOH A 114 514 258 HOH HOH . D 4 HOH A 115 515 319 HOH HOH . D 4 HOH A 116 516 389 HOH HOH . D 4 HOH A 117 517 227 HOH HOH . D 4 HOH A 118 518 321 HOH HOH . D 4 HOH A 119 519 340 HOH HOH . D 4 HOH A 120 520 353 HOH HOH . D 4 HOH A 121 521 247 HOH HOH . D 4 HOH A 122 522 252 HOH HOH . D 4 HOH A 123 523 291 HOH HOH . D 4 HOH A 124 524 298 HOH HOH . D 4 HOH A 125 525 309 HOH HOH . D 4 HOH A 126 526 293 HOH HOH . D 4 HOH A 127 527 320 HOH HOH . D 4 HOH A 128 528 431 HOH HOH . D 4 HOH A 129 529 294 HOH HOH . D 4 HOH A 130 530 230 HOH HOH . D 4 HOH A 131 531 334 HOH HOH . D 4 HOH A 132 532 382 HOH HOH . D 4 HOH A 133 533 414 HOH HOH . D 4 HOH A 134 534 261 HOH HOH . D 4 HOH A 135 535 363 HOH HOH . D 4 HOH A 136 536 271 HOH HOH . D 4 HOH A 137 537 239 HOH HOH . D 4 HOH A 138 538 265 HOH HOH . D 4 HOH A 139 539 308 HOH HOH . D 4 HOH A 140 540 323 HOH HOH . D 4 HOH A 141 541 248 HOH HOH . D 4 HOH A 142 542 372 HOH HOH . D 4 HOH A 143 543 345 HOH HOH . D 4 HOH A 144 544 364 HOH HOH . D 4 HOH A 145 545 380 HOH HOH . D 4 HOH A 146 546 269 HOH HOH . D 4 HOH A 147 547 233 HOH HOH . D 4 HOH A 148 548 408 HOH HOH . D 4 HOH A 149 549 396 HOH HOH . D 4 HOH A 150 550 243 HOH HOH . D 4 HOH A 151 551 257 HOH HOH . D 4 HOH A 152 552 279 HOH HOH . D 4 HOH A 153 553 351 HOH HOH . D 4 HOH A 154 554 286 HOH HOH . D 4 HOH A 155 555 324 HOH HOH . D 4 HOH A 156 556 369 HOH HOH . D 4 HOH A 157 557 276 HOH HOH . D 4 HOH A 158 558 328 HOH HOH . D 4 HOH A 159 559 307 HOH HOH . D 4 HOH A 160 560 314 HOH HOH . D 4 HOH A 161 561 285 HOH HOH . D 4 HOH A 162 562 432 HOH HOH . D 4 HOH A 163 563 331 HOH HOH . D 4 HOH A 164 564 225 HOH HOH . D 4 HOH A 165 565 355 HOH HOH . D 4 HOH A 166 566 278 HOH HOH . D 4 HOH A 167 567 436 HOH HOH . D 4 HOH A 168 568 423 HOH HOH . D 4 HOH A 169 569 438 HOH HOH . D 4 HOH A 170 570 397 HOH HOH . D 4 HOH A 171 571 404 HOH HOH . D 4 HOH A 172 572 295 HOH HOH . D 4 HOH A 173 573 391 HOH HOH . D 4 HOH A 174 574 366 HOH HOH . D 4 HOH A 175 575 426 HOH HOH . D 4 HOH A 176 576 377 HOH HOH . D 4 HOH A 177 577 390 HOH HOH . D 4 HOH A 178 578 343 HOH HOH . D 4 HOH A 179 579 433 HOH HOH . D 4 HOH A 180 580 312 HOH HOH . D 4 HOH A 181 581 226 HOH HOH . D 4 HOH A 182 582 329 HOH HOH . D 4 HOH A 183 583 392 HOH HOH . D 4 HOH A 184 584 439 HOH HOH . D 4 HOH A 185 585 378 HOH HOH . D 4 HOH A 186 586 349 HOH HOH . D 4 HOH A 187 587 413 HOH HOH . D 4 HOH A 188 588 330 HOH HOH . D 4 HOH A 189 589 249 HOH HOH . D 4 HOH A 190 590 300 HOH HOH . D 4 HOH A 191 591 367 HOH HOH . D 4 HOH A 192 592 428 HOH HOH . D 4 HOH A 193 593 430 HOH HOH . D 4 HOH A 194 594 339 HOH HOH . D 4 HOH A 195 595 419 HOH HOH . D 4 HOH A 196 596 421 HOH HOH . D 4 HOH A 197 597 422 HOH HOH . D 4 HOH A 198 598 407 HOH HOH . D 4 HOH A 199 599 267 HOH HOH . D 4 HOH A 200 600 273 HOH HOH . D 4 HOH A 201 601 310 HOH HOH . D 4 HOH A 202 602 375 HOH HOH . D 4 HOH A 203 603 424 HOH HOH . D 4 HOH A 204 604 417 HOH HOH . D 4 HOH A 205 605 368 HOH HOH . D 4 HOH A 206 606 246 HOH HOH . D 4 HOH A 207 607 420 HOH HOH . D 4 HOH A 208 608 272 HOH HOH . D 4 HOH A 209 609 255 HOH HOH . D 4 HOH A 210 610 385 HOH HOH . D 4 HOH A 211 611 444 HOH HOH . D 4 HOH A 212 612 410 HOH HOH . D 4 HOH A 213 613 435 HOH HOH . D 4 HOH A 214 614 443 HOH HOH . D 4 HOH A 215 615 415 HOH HOH . D 4 HOH A 216 616 348 HOH HOH . D 4 HOH A 217 617 429 HOH HOH . D 4 HOH A 218 618 437 HOH HOH . D 4 HOH A 219 619 442 HOH HOH . D 4 HOH A 220 620 441 HOH HOH . D 4 HOH A 221 621 409 HOH HOH . D 4 HOH A 222 622 327 HOH HOH . D 4 HOH A 223 623 440 HOH HOH . D 4 HOH A 224 624 386 HOH HOH . D 4 HOH A 225 625 434 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 51Q . . . C 3 20.103 8.642 -2.016 1 41.97 ? O2 51Q 302 A 1 HETATM 2 C C4 51Q . . . C 3 19.903 8.613 -3.246 1 56.55 ? C4 51Q 302 A 1 HETATM 3 O O3 51Q . . . C 3 20.923 9.168 -3.932 1 44.66 ? O3 51Q 302 A 1 HETATM 4 C C3 51Q . . . C 3 18.651 8.043 -4.007 1 53.36 ? C3 51Q 302 A 1 HETATM 5 C C5 51Q . . . C 3 17.927 9.261 -4.588 1 57.04 ? C5 51Q 302 A 1 HETATM 6 S S 51Q . . . C 3 17.45 6.871 -3.216 1 45.71 ? S 51Q 302 A 1 HETATM 7 C C 51Q . . . C 3 18.613 5.758 -2.746 1 34.02 ? C 51Q 302 A 1 HETATM 8 C C2 51Q . . . C 3 18.293 4.97 -1.569 1 26.68 ? C2 51Q 302 A 1 HETATM 9 O O1 51Q . . . C 3 17.157 5.002 -1.146 1 27.57 ? O1 51Q 302 A 1 HETATM 10 N N2 51Q . . . C 3 19.285 4.248 -1.073 1 27.69 ? N2 51Q 302 A 1 HETATM 11 C C1 51Q . . . C 3 20.509 4.207 -1.665 1 29.29 ? C1 51Q 302 A 1 HETATM 12 O O 51Q . . . C 3 21.457 3.457 -1.197 1 30.39 ? O 51Q 302 A 1 HETATM 13 N N1 51Q . . . C 3 20.807 4.862 -2.813 1 34.68 ? N1 51Q 302 A 1 HETATM 14 N N 51Q . . . C 3 19.804 5.697 -3.301 1 32.11 ? N 51Q 302 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #