data_5CHW
#
_model_server_result.job_id            7MMGoHRGIMLphfGBX-f25w 
_model_server_result.datetime_utc      '2024-11-23 21:17:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5chw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":202}' 
#
_entry.id    5CHW 
#
_exptl.entry_id    5CHW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CHW 
_cell.length_a            102.85 
_cell.length_b            103.96 
_cell.length_c            192.8 
_cell.Z_PDB               40 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CHW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
? monomeric 1 author_defined_assembly 7 
? monomeric 1 author_defined_assembly 8 
? monomeric 1 author_defined_assembly 9 
? monomeric 1 author_defined_assembly 10 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,K,L,M,GA 1 1 
B,N,O,P,Q,HA 2 1 
C,R,IA 3 1 
D,S,T,U,V,W,JA 4 1 
E,X,Y,Z,KA 5 1 
F,LA 6 1 
G,AA,BA,CA,DA,MA 7 1 
H,EA,NA 8 1 
I,FA,OA 9 1 
J,PA 10 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 L N N 
? 3 M N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 W N N 
? 3 CA N N 
? 3 DA N N 
? 3 FA N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5CHW 
_atom_sites.fract_transf_matrix[1][1]    0.009723 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009619 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005187 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 2 SO4 A 1 201 13 SO4 SO4 . 
L 3 GOL A 1 202 3 GOL GOL . 
M 3 GOL A 1 203 8 GOL GOL . 
N 2 SO4 B 1 201 9 SO4 SO4 . 
O 3 GOL B 1 202 2 GOL GOL . 
P 3 GOL B 1 203 7 GOL GOL . 
Q 3 GOL B 1 204 9 GOL GOL . 
R 2 SO4 C 1 201 3 SO4 SO4 . 
S 2 SO4 D 1 201 1 SO4 SO4 . 
T 2 SO4 D 1 202 10 SO4 SO4 . 
U 2 SO4 D 1 203 11 SO4 SO4 . 
V 2 SO4 D 1 204 12 SO4 SO4 . 
W 3 GOL D 1 205 6 GOL GOL . 
X 2 SO4 E 1 201 2 SO4 SO4 . 
Y 2 SO4 E 1 202 4 SO4 SO4 . 
Z 2 SO4 E 1 203 7 SO4 SO4 . 
AA 2 SO4 G 1 201 5 SO4 SO4 . 
BA 2 SO4 G 1 202 8 SO4 SO4 . 
CA 3 GOL G 1 203 1 GOL GOL . 
DA 3 GOL G 1 204 5 GOL GOL . 
EA 2 SO4 H 1 201 6 SO4 SO4 . 
FA 3 GOL I 1 201 4 GOL GOL . 
GA 4 HOH A 1 301 15 HOH HOH . 
GA 4 HOH A 2 302 77 HOH HOH . 
GA 4 HOH A 3 303 187 HOH HOH . 
GA 4 HOH A 4 304 44 HOH HOH . 
GA 4 HOH A 5 305 189 HOH HOH . 
GA 4 HOH A 6 306 68 HOH HOH . 
GA 4 HOH A 7 307 74 HOH HOH . 
GA 4 HOH A 8 308 85 HOH HOH . 
GA 4 HOH A 9 309 67 HOH HOH . 
GA 4 HOH A 10 310 54 HOH HOH . 
GA 4 HOH A 11 311 51 HOH HOH . 
GA 4 HOH A 12 312 191 HOH HOH . 
GA 4 HOH A 13 313 79 HOH HOH . 
GA 4 HOH A 14 314 59 HOH HOH . 
GA 4 HOH A 15 315 78 HOH HOH . 
GA 4 HOH A 16 316 18 HOH HOH . 
GA 4 HOH A 17 317 167 HOH HOH . 
GA 4 HOH A 18 318 95 HOH HOH . 
GA 4 HOH A 19 319 150 HOH HOH . 
GA 4 HOH A 20 320 160 HOH HOH . 
GA 4 HOH A 21 321 133 HOH HOH . 
GA 4 HOH A 22 322 143 HOH HOH . 
GA 4 HOH A 23 323 217 HOH HOH . 
HA 4 HOH B 1 301 109 HOH HOH . 
HA 4 HOH B 2 302 19 HOH HOH . 
HA 4 HOH B 3 303 215 HOH HOH . 
HA 4 HOH B 4 304 34 HOH HOH . 
HA 4 HOH B 5 305 83 HOH HOH . 
HA 4 HOH B 6 306 72 HOH HOH . 
HA 4 HOH B 7 307 31 HOH HOH . 
HA 4 HOH B 8 308 201 HOH HOH . 
HA 4 HOH B 9 309 192 HOH HOH . 
HA 4 HOH B 10 310 171 HOH HOH . 
HA 4 HOH B 11 311 190 HOH HOH . 
HA 4 HOH B 12 312 177 HOH HOH . 
HA 4 HOH B 13 313 50 HOH HOH . 
HA 4 HOH B 14 314 223 HOH HOH . 
HA 4 HOH B 15 315 163 HOH HOH . 
IA 4 HOH C 1 301 222 HOH HOH . 
IA 4 HOH C 2 302 199 HOH HOH . 
IA 4 HOH C 3 303 41 HOH HOH . 
IA 4 HOH C 4 304 208 HOH HOH . 
IA 4 HOH C 5 305 86 HOH HOH . 
IA 4 HOH C 6 306 6 HOH HOH . 
IA 4 HOH C 7 307 138 HOH HOH . 
IA 4 HOH C 8 308 97 HOH HOH . 
IA 4 HOH C 9 309 119 HOH HOH . 
IA 4 HOH C 10 310 178 HOH HOH . 
IA 4 HOH C 11 311 88 HOH HOH . 
IA 4 HOH C 12 312 82 HOH HOH . 
IA 4 HOH C 13 313 148 HOH HOH . 
IA 4 HOH C 14 314 108 HOH HOH . 
IA 4 HOH C 15 315 153 HOH HOH . 
IA 4 HOH C 16 316 4 HOH HOH . 
IA 4 HOH C 17 317 115 HOH HOH . 
IA 4 HOH C 18 318 162 HOH HOH . 
JA 4 HOH D 1 301 132 HOH HOH . 
JA 4 HOH D 2 302 62 HOH HOH . 
JA 4 HOH D 3 303 76 HOH HOH . 
JA 4 HOH D 4 304 170 HOH HOH . 
JA 4 HOH D 5 305 197 HOH HOH . 
JA 4 HOH D 6 306 96 HOH HOH . 
JA 4 HOH D 7 307 47 HOH HOH . 
JA 4 HOH D 8 308 169 HOH HOH . 
JA 4 HOH D 9 309 173 HOH HOH . 
JA 4 HOH D 10 310 147 HOH HOH . 
JA 4 HOH D 11 311 176 HOH HOH . 
JA 4 HOH D 12 312 60 HOH HOH . 
JA 4 HOH D 13 313 158 HOH HOH . 
JA 4 HOH D 14 314 106 HOH HOH . 
JA 4 HOH D 15 315 142 HOH HOH . 
JA 4 HOH D 16 316 140 HOH HOH . 
JA 4 HOH D 17 317 185 HOH HOH . 
JA 4 HOH D 18 318 210 HOH HOH . 
JA 4 HOH D 19 319 91 HOH HOH . 
JA 4 HOH D 20 320 118 HOH HOH . 
KA 4 HOH E 1 301 203 HOH HOH . 
KA 4 HOH E 2 302 22 HOH HOH . 
KA 4 HOH E 3 303 1 HOH HOH . 
KA 4 HOH E 4 304 205 HOH HOH . 
KA 4 HOH E 5 305 172 HOH HOH . 
KA 4 HOH E 6 306 206 HOH HOH . 
KA 4 HOH E 7 307 156 HOH HOH . 
KA 4 HOH E 8 308 53 HOH HOH . 
KA 4 HOH E 9 309 81 HOH HOH . 
KA 4 HOH E 10 310 202 HOH HOH . 
KA 4 HOH E 11 311 92 HOH HOH . 
KA 4 HOH E 12 312 183 HOH HOH . 
KA 4 HOH E 13 313 225 HOH HOH . 
KA 4 HOH E 14 314 70 HOH HOH . 
KA 4 HOH E 15 315 130 HOH HOH . 
KA 4 HOH E 16 316 12 HOH HOH . 
KA 4 HOH E 17 317 207 HOH HOH . 
KA 4 HOH E 18 318 98 HOH HOH . 
KA 4 HOH E 19 319 144 HOH HOH . 
KA 4 HOH E 20 320 164 HOH HOH . 
KA 4 HOH E 21 321 155 HOH HOH . 
KA 4 HOH E 22 322 221 HOH HOH . 
KA 4 HOH E 23 323 64 HOH HOH . 
KA 4 HOH E 24 324 168 HOH HOH . 
LA 4 HOH F 1 201 45 HOH HOH . 
LA 4 HOH F 2 202 69 HOH HOH . 
LA 4 HOH F 3 203 151 HOH HOH . 
LA 4 HOH F 4 204 200 HOH HOH . 
LA 4 HOH F 5 205 123 HOH HOH . 
LA 4 HOH F 6 206 182 HOH HOH . 
MA 4 HOH G 1 301 209 HOH HOH . 
MA 4 HOH G 2 302 218 HOH HOH . 
MA 4 HOH G 3 303 127 HOH HOH . 
MA 4 HOH G 4 304 149 HOH HOH . 
MA 4 HOH G 5 305 139 HOH HOH . 
MA 4 HOH G 6 306 196 HOH HOH . 
MA 4 HOH G 7 307 184 HOH HOH . 
MA 4 HOH G 8 308 84 HOH HOH . 
MA 4 HOH G 9 309 32 HOH HOH . 
MA 4 HOH G 10 310 8 HOH HOH . 
MA 4 HOH G 11 311 181 HOH HOH . 
MA 4 HOH G 12 312 126 HOH HOH . 
MA 4 HOH G 13 313 7 HOH HOH . 
MA 4 HOH G 14 314 25 HOH HOH . 
MA 4 HOH G 15 315 16 HOH HOH . 
MA 4 HOH G 16 316 219 HOH HOH . 
MA 4 HOH G 17 317 121 HOH HOH . 
MA 4 HOH G 18 318 52 HOH HOH . 
MA 4 HOH G 19 319 26 HOH HOH . 
MA 4 HOH G 20 320 66 HOH HOH . 
MA 4 HOH G 21 321 134 HOH HOH . 
MA 4 HOH G 22 322 204 HOH HOH . 
MA 4 HOH G 23 323 71 HOH HOH . 
MA 4 HOH G 24 324 102 HOH HOH . 
MA 4 HOH G 25 325 101 HOH HOH . 
MA 4 HOH G 26 326 136 HOH HOH . 
MA 4 HOH G 27 327 165 HOH HOH . 
MA 4 HOH G 28 328 146 HOH HOH . 
MA 4 HOH G 29 329 24 HOH HOH . 
MA 4 HOH G 30 330 166 HOH HOH . 
MA 4 HOH G 31 331 226 HOH HOH . 
MA 4 HOH G 32 332 61 HOH HOH . 
MA 4 HOH G 33 333 180 HOH HOH . 
NA 4 HOH H 1 301 212 HOH HOH . 
NA 4 HOH H 2 302 80 HOH HOH . 
NA 4 HOH H 3 303 152 HOH HOH . 
NA 4 HOH H 4 304 89 HOH HOH . 
NA 4 HOH H 5 305 186 HOH HOH . 
NA 4 HOH H 6 306 220 HOH HOH . 
NA 4 HOH H 7 307 211 HOH HOH . 
OA 4 HOH I 1 301 193 HOH HOH . 
OA 4 HOH I 2 302 75 HOH HOH . 
OA 4 HOH I 3 303 175 HOH HOH . 
PA 4 HOH J 1 201 227 HOH HOH . 
PA 4 HOH J 2 202 99 HOH HOH . 
PA 4 HOH J 3 203 188 HOH HOH . 
PA 4 HOH J 4 204 103 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . O 3 -7.551 14.424 12.279 1 104.12 ? C1 GOL 202 B 1 
HETATM 2 O O1 GOL . . . O 3 -7.62 14.06 10.918 1 105.38 ? O1 GOL 202 B 1 
HETATM 3 C C2 GOL . . . O 3 -8.524 15.562 12.572 1 102.94 ? C2 GOL 202 B 1 
HETATM 4 O O2 GOL . . . O 3 -9.499 15.667 11.548 1 87.98 ? O2 GOL 202 B 1 
HETATM 5 C C3 GOL . . . O 3 -9.202 15.307 13.919 1 112.07 ? C3 GOL 202 B 1 
HETATM 6 O O3 GOL . . . O 3 -8.247 14.902 14.883 1 112.43 ? O3 GOL 202 B 1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           6 
#