data_5CI0 # _model_server_result.job_id vyzWclJGFiECCCRxfMCGsw _model_server_result.datetime_utc '2024-10-14 06:19:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ci0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5CI0 # _exptl.entry_id 5CI0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 127.689 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description MU-OXO-DIIRON _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5CI0 _cell.length_a 91.613 _cell.length_b 91.613 _cell.length_c 205.65 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CI0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_444 -y-1,-x-1,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 -45.8065 -79.339185 -34.275 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 121 A SER 121 1_555 A N F2Y 122 A F2Y 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C F2Y 122 A F2Y 122 1_555 A N THR 123 A THR 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OD2 ASP 84 A ASP 84 1_555 B FE2 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc2 A OE1 GLU 115 A GLU 115 1_555 B FE2 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc3 A OE2 GLU 115 A GLU 115 1_555 B FE1 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc4 A ND1 HIS 118 A HIS 118 1_555 B FE2 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc5 A OE1 GLU 204 A GLU 204 1_555 B FE1 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc6 A OE1 GLU 238 A GLU 238 1_555 B FE1 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc7 A ND1 HIS 241 A HIS 241 1_555 B FE1 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc8 B FE1 FEO . A FEO 401 1_555 G O HOH . A HOH 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc9 B FE2 FEO . A FEO 401 1_555 G O HOH . A HOH 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? # _chem_comp.formula 'Fe2 O' _chem_comp.formula_weight 127.689 _chem_comp.id FEO _chem_comp.mon_nstd_flag . _chem_comp.name MU-OXO-DIIRON _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 O FEO sing 107 n n FE2 O FEO sing 108 n n # _atom_sites.entry_id 5CI0 _atom_sites.fract_transf_matrix[1][1] 0.010915 _atom_sites.fract_transf_matrix[1][2] 0.006302 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004863 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FEO A 1 401 1 FEO FEO . C 3 SO4 A 1 402 1 SO4 SO4 . D 3 SO4 A 1 403 3 SO4 SO4 . E 3 SO4 A 1 404 4 SO4 SO4 . F 3 SO4 A 1 405 5 SO4 SO4 . G 4 HOH A 1 501 186 HOH HOH . G 4 HOH A 2 502 78 HOH HOH . G 4 HOH A 3 503 31 HOH HOH . G 4 HOH A 4 504 20 HOH HOH . G 4 HOH A 5 505 170 HOH HOH . G 4 HOH A 6 506 100 HOH HOH . G 4 HOH A 7 507 83 HOH HOH . G 4 HOH A 8 508 96 HOH HOH . G 4 HOH A 9 509 174 HOH HOH . G 4 HOH A 10 510 93 HOH HOH . G 4 HOH A 11 511 86 HOH HOH . G 4 HOH A 12 512 55 HOH HOH . G 4 HOH A 13 513 60 HOH HOH . G 4 HOH A 14 514 203 HOH HOH . G 4 HOH A 15 515 153 HOH HOH . G 4 HOH A 16 516 167 HOH HOH . G 4 HOH A 17 517 66 HOH HOH . G 4 HOH A 18 518 5 HOH HOH . G 4 HOH A 19 519 30 HOH HOH . G 4 HOH A 20 520 208 HOH HOH . G 4 HOH A 21 521 23 HOH HOH . G 4 HOH A 22 522 87 HOH HOH . G 4 HOH A 23 523 123 HOH HOH . G 4 HOH A 24 524 9 HOH HOH . G 4 HOH A 25 525 22 HOH HOH . G 4 HOH A 26 526 98 HOH HOH . G 4 HOH A 27 527 219 HOH HOH . G 4 HOH A 28 528 176 HOH HOH . G 4 HOH A 29 529 160 HOH HOH . G 4 HOH A 30 530 175 HOH HOH . G 4 HOH A 31 531 81 HOH HOH . G 4 HOH A 32 532 125 HOH HOH . G 4 HOH A 33 533 113 HOH HOH . G 4 HOH A 34 534 15 HOH HOH . G 4 HOH A 35 535 1 HOH HOH . G 4 HOH A 36 536 4 HOH HOH . G 4 HOH A 37 537 224 HOH HOH . G 4 HOH A 38 538 41 HOH HOH . G 4 HOH A 39 539 147 HOH HOH . G 4 HOH A 40 540 18 HOH HOH . G 4 HOH A 41 541 150 HOH HOH . G 4 HOH A 42 542 12 HOH HOH . G 4 HOH A 43 543 7 HOH HOH . G 4 HOH A 44 544 200 HOH HOH . G 4 HOH A 45 545 50 HOH HOH . G 4 HOH A 46 546 112 HOH HOH . G 4 HOH A 47 547 88 HOH HOH . G 4 HOH A 48 548 48 HOH HOH . G 4 HOH A 49 549 61 HOH HOH . G 4 HOH A 50 550 2 HOH HOH . G 4 HOH A 51 551 227 HOH HOH . G 4 HOH A 52 552 159 HOH HOH . G 4 HOH A 53 553 118 HOH HOH . G 4 HOH A 54 554 42 HOH HOH . G 4 HOH A 55 555 223 HOH HOH . G 4 HOH A 56 556 202 HOH HOH . G 4 HOH A 57 557 95 HOH HOH . G 4 HOH A 58 558 104 HOH HOH . G 4 HOH A 59 559 192 HOH HOH . G 4 HOH A 60 560 213 HOH HOH . G 4 HOH A 61 561 45 HOH HOH . G 4 HOH A 62 562 38 HOH HOH . G 4 HOH A 63 563 132 HOH HOH . G 4 HOH A 64 564 33 HOH HOH . G 4 HOH A 65 565 34 HOH HOH . G 4 HOH A 66 566 44 HOH HOH . G 4 HOH A 67 567 231 HOH HOH . G 4 HOH A 68 568 69 HOH HOH . G 4 HOH A 69 569 40 HOH HOH . G 4 HOH A 70 570 136 HOH HOH . G 4 HOH A 71 571 204 HOH HOH . G 4 HOH A 72 572 114 HOH HOH . G 4 HOH A 73 573 173 HOH HOH . G 4 HOH A 74 574 145 HOH HOH . G 4 HOH A 75 575 85 HOH HOH . G 4 HOH A 76 576 207 HOH HOH . G 4 HOH A 77 577 164 HOH HOH . G 4 HOH A 78 578 105 HOH HOH . G 4 HOH A 79 579 99 HOH HOH . G 4 HOH A 80 580 221 HOH HOH . G 4 HOH A 81 581 36 HOH HOH . G 4 HOH A 82 582 53 HOH HOH . G 4 HOH A 83 583 103 HOH HOH . G 4 HOH A 84 584 205 HOH HOH . G 4 HOH A 85 585 211 HOH HOH . G 4 HOH A 86 586 37 HOH HOH . G 4 HOH A 87 587 39 HOH HOH . G 4 HOH A 88 588 84 HOH HOH . G 4 HOH A 89 589 135 HOH HOH . G 4 HOH A 90 590 24 HOH HOH . G 4 HOH A 91 591 56 HOH HOH . G 4 HOH A 92 592 43 HOH HOH . G 4 HOH A 93 593 108 HOH HOH . G 4 HOH A 94 594 49 HOH HOH . G 4 HOH A 95 595 73 HOH HOH . G 4 HOH A 96 596 63 HOH HOH . G 4 HOH A 97 597 52 HOH HOH . G 4 HOH A 98 598 65 HOH HOH . G 4 HOH A 99 599 232 HOH HOH . G 4 HOH A 100 600 91 HOH HOH . G 4 HOH A 101 601 8 HOH HOH . G 4 HOH A 102 602 6 HOH HOH . G 4 HOH A 103 603 67 HOH HOH . G 4 HOH A 104 604 144 HOH HOH . G 4 HOH A 105 605 71 HOH HOH . G 4 HOH A 106 606 171 HOH HOH . G 4 HOH A 107 607 54 HOH HOH . G 4 HOH A 108 608 79 HOH HOH . G 4 HOH A 109 609 92 HOH HOH . G 4 HOH A 110 610 178 HOH HOH . G 4 HOH A 111 611 64 HOH HOH . G 4 HOH A 112 612 134 HOH HOH . G 4 HOH A 113 613 122 HOH HOH . G 4 HOH A 114 614 59 HOH HOH . G 4 HOH A 115 615 190 HOH HOH . G 4 HOH A 116 616 28 HOH HOH . G 4 HOH A 117 617 130 HOH HOH . G 4 HOH A 118 618 46 HOH HOH . G 4 HOH A 119 619 189 HOH HOH . G 4 HOH A 120 620 89 HOH HOH . G 4 HOH A 121 621 62 HOH HOH . G 4 HOH A 122 622 120 HOH HOH . G 4 HOH A 123 623 109 HOH HOH . G 4 HOH A 124 624 172 HOH HOH . G 4 HOH A 125 625 230 HOH HOH . G 4 HOH A 126 626 75 HOH HOH . G 4 HOH A 127 627 94 HOH HOH . G 4 HOH A 128 628 138 HOH HOH . G 4 HOH A 129 629 58 HOH HOH . G 4 HOH A 130 630 119 HOH HOH . G 4 HOH A 131 631 148 HOH HOH . G 4 HOH A 132 632 161 HOH HOH . G 4 HOH A 133 633 179 HOH HOH . G 4 HOH A 134 634 35 HOH HOH . G 4 HOH A 135 635 57 HOH HOH . G 4 HOH A 136 636 162 HOH HOH . G 4 HOH A 137 637 121 HOH HOH . G 4 HOH A 138 638 217 HOH HOH . G 4 HOH A 139 639 157 HOH HOH . G 4 HOH A 140 640 149 HOH HOH . G 4 HOH A 141 641 158 HOH HOH . G 4 HOH A 142 642 214 HOH HOH . G 4 HOH A 143 643 10 HOH HOH . G 4 HOH A 144 644 117 HOH HOH . G 4 HOH A 145 645 220 HOH HOH . G 4 HOH A 146 646 180 HOH HOH . G 4 HOH A 147 647 165 HOH HOH . G 4 HOH A 148 648 137 HOH HOH . G 4 HOH A 149 649 191 HOH HOH . G 4 HOH A 150 650 47 HOH HOH . G 4 HOH A 151 651 129 HOH HOH . G 4 HOH A 152 652 133 HOH HOH . G 4 HOH A 153 653 228 HOH HOH . G 4 HOH A 154 654 226 HOH HOH . G 4 HOH A 155 655 212 HOH HOH . G 4 HOH A 156 656 152 HOH HOH . G 4 HOH A 157 657 142 HOH HOH . G 4 HOH A 158 658 70 HOH HOH . G 4 HOH A 159 659 80 HOH HOH . G 4 HOH A 160 660 184 HOH HOH . G 4 HOH A 161 661 90 HOH HOH . G 4 HOH A 162 662 225 HOH HOH . G 4 HOH A 163 663 229 HOH HOH . G 4 HOH A 164 664 131 HOH HOH . G 4 HOH A 165 665 177 HOH HOH . G 4 HOH A 166 666 185 HOH HOH . G 4 HOH A 167 667 74 HOH HOH . G 4 HOH A 168 668 182 HOH HOH . G 4 HOH A 169 669 196 HOH HOH . G 4 HOH A 170 670 76 HOH HOH . G 4 HOH A 171 671 107 HOH HOH . G 4 HOH A 172 672 206 HOH HOH . G 4 HOH A 173 673 124 HOH HOH . G 4 HOH A 174 674 181 HOH HOH . G 4 HOH A 175 675 106 HOH HOH . G 4 HOH A 176 676 25 HOH HOH . G 4 HOH A 177 677 146 HOH HOH . G 4 HOH A 178 678 193 HOH HOH . G 4 HOH A 179 679 116 HOH HOH . G 4 HOH A 180 680 166 HOH HOH . G 4 HOH A 181 681 151 HOH HOH . G 4 HOH A 182 682 187 HOH HOH . G 4 HOH A 183 683 216 HOH HOH . G 4 HOH A 184 684 29 HOH HOH . G 4 HOH A 185 685 110 HOH HOH . G 4 HOH A 186 686 140 HOH HOH . G 4 HOH A 187 687 199 HOH HOH . G 4 HOH A 188 688 215 HOH HOH . G 4 HOH A 189 689 195 HOH HOH . G 4 HOH A 190 690 143 HOH HOH . G 4 HOH A 191 691 128 HOH HOH . G 4 HOH A 192 692 183 HOH HOH . G 4 HOH A 193 693 126 HOH HOH . G 4 HOH A 194 694 198 HOH HOH . G 4 HOH A 195 695 141 HOH HOH . G 4 HOH A 196 696 163 HOH HOH . G 4 HOH A 197 697 155 HOH HOH . G 4 HOH A 198 698 209 HOH HOH . G 4 HOH A 199 699 201 HOH HOH . G 4 HOH A 200 700 169 HOH HOH . G 4 HOH A 201 701 139 HOH HOH . G 4 HOH A 202 702 127 HOH HOH . G 4 HOH A 203 703 197 HOH HOH . G 4 HOH A 204 704 222 HOH HOH . G 4 HOH A 205 705 194 HOH HOH . G 4 HOH A 206 706 168 HOH HOH . G 4 HOH A 207 707 154 HOH HOH . G 4 HOH A 208 708 188 HOH HOH . G 4 HOH A 209 709 218 HOH HOH . G 4 HOH A 210 710 210 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FEO . . . B 2 -26.688 -29.027 -6.52 1 48.2 3 FE1 FEO 401 A 1 HETATM 2 FE FE2 FEO . . . B 2 -26.734 -26.593 -8.547 1 51.73 3 FE2 FEO 401 A 1 HETATM 3 O O FEO . . . B 2 -27.476 -27.536 -7.181 1 48.4 -2 O FEO 401 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 46 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 3 #