data_5CIB
#
_model_server_result.job_id            4XVsed0JdD-IYc1JwFPVWw 
_model_server_result.datetime_utc      '2024-11-06 03:04:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cib 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":302}' 
#
_entry.id    5CIB 
#
_exptl.entry_id    5CIB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              121.18 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,4-dimethylaniline 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.49 
_cell.angle_gamma         90 
_cell.entry_id            5CIB 
_cell.length_a            45.371 
_cell.length_b            107.461 
_cell.length_c            87.217 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CIB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B SG CYS 19 B CYS 14 1_555 G CAB HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 sing 
covale ? covale2 B SG CYS 22 B CYS 17 1_555 G CAC HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 sing 
covale ? covale3 D SG CYS 19 D CYS 14 1_555 J CAB HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 sing 
covale ? covale4 D SG CYS 22 D CYS 17 1_555 J CAC HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc1 A NE2 HIS 175 A HIS 175 1_555 E FE HEC . A HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc2 B NE2 HIS 23 B HIS 18 1_555 G FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
metalc ? metalc3 B SD MET 85 B MET 80 1_555 G FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? 
metalc ? metalc4 C NE2 HIS 175 C HIS 175 1_555 H FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc5 D NE2 HIS 23 D HIS 18 1_555 J FE HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc6 D SD MET 85 D MET 80 1_555 J FE HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
#
_chem_comp.formula           'C8 H11 N' 
_chem_comp.formula_weight    121.18 
_chem_comp.id                51S 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,4-dimethylaniline 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CN CG 51S sing 1 n n 
CD1 CG 51S doub 2 n y 
CD1 CE1 51S sing 3 n y 
CG CD2 51S sing 4 n y 
CE1 CZ 51S doub 5 n y 
CD2 CE2 51S doub 6 n y 
CZ CE2 51S sing 7 n y 
CZ NH2 51S sing 8 n n 
CE2 CM 51S sing 9 n n 
CD1 H1 51S sing 10 n n 
CE1 H2 51S sing 11 n n 
CD2 H3 51S sing 12 n n 
CM H4 51S sing 13 n n 
CM H5 51S sing 14 n n 
CM H6 51S sing 15 n n 
CN H7 51S sing 16 n n 
CN H8 51S sing 17 n n 
CN H9 51S sing 18 n n 
NH2 H10 51S sing 19 n n 
NH2 H11 51S sing 20 n n 
#
_atom_sites.entry_id                     5CIB 
_atom_sites.fract_transf_matrix[1][1]    0.022041 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005694 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009306 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011842 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 HEC A 1 301 296 HEC HEM . 
F 4 51S A 1 302 901 51S DMA . 
G 3 HEC B 1 201 104 HEC HEM . 
H 3 HEC C 1 301 296 HEC HEM . 
I 4 51S C 1 302 901 51S DMA . 
J 3 HEC D 1 201 104 HEC HEM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CG 51S . . . F 4 -24.624 26.801 -2.597 1 58.4 ? CG 51S 302 A 1 
HETATM 2 C CD1 51S . . . F 4 -24.382 25.541 -3.112 1 62.01 ? CD1 51S 302 A 1 
HETATM 3 C CE1 51S . . . F 4 -24.441 24.425 -2.296 1 59.58 ? CE1 51S 302 A 1 
HETATM 4 C CD2 51S . . . F 4 -24.925 26.952 -1.252 1 46.58 ? CD2 51S 302 A 1 
HETATM 5 C CE2 51S . . . F 4 -24.982 25.834 -0.433 1 54.21 ? CE2 51S 302 A 1 
HETATM 6 C CZ 51S . . . F 4 -24.741 24.573 -0.954 1 53.48 ? CZ 51S 302 A 1 
HETATM 7 C CM 51S . . . F 4 -25.307 25.99 1.035 1 64.08 ? CM 51S 302 A 1 
HETATM 8 C CN 51S . . . F 4 -24.548 28 -3.516 1 56.2 ? CN 51S 302 A 1 
HETATM 9 N NH2 51S . . . F 4 -24.801 23.431 -0.114 1 49.63 ? NH2 51S 302 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#