data_5CJE
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_model_server_result.job_id            cRrT8tMiDvfKs7fk-5eUVg 
_model_server_result.datetime_utc      '2024-11-27 00:15:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cje 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
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_entry.id    5CJE 
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_exptl.entry_id    5CJE 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          98.91 
_cell.angle_gamma         90 
_cell.entry_id            5CJE 
_cell.length_a            110.184 
_cell.length_b            50.585 
_cell.length_c            74.638 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5CJE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
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_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
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_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             344 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              344 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            FE 
_struct_conn.ptnr2_label_comp_id            HEM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             HEM 
_struct_conn.ptnr2_auth_seq_id              402 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.244 
_struct_conn.pdbx_value_order               ? 
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_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5CJE 
_atom_sites.fract_transf_matrix[1][1]    0.009076 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001423 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019769 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013562 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 401 1 GOL GOL . 
C 3 HEM A 1 402 1 HEM HEM . 
D 4 HOH A 1 501 60 HOH HOH . 
D 4 HOH A 2 502 21 HOH HOH . 
D 4 HOH A 3 503 18 HOH HOH . 
D 4 HOH A 4 504 39 HOH HOH . 
D 4 HOH A 5 505 61 HOH HOH . 
D 4 HOH A 6 506 38 HOH HOH . 
D 4 HOH A 7 507 52 HOH HOH . 
D 4 HOH A 8 508 2 HOH HOH . 
D 4 HOH A 9 509 72 HOH HOH . 
D 4 HOH A 10 510 19 HOH HOH . 
D 4 HOH A 11 511 37 HOH HOH . 
D 4 HOH A 12 512 31 HOH HOH . 
D 4 HOH A 13 513 74 HOH HOH . 
D 4 HOH A 14 514 13 HOH HOH . 
D 4 HOH A 15 515 33 HOH HOH . 
D 4 HOH A 16 516 79 HOH HOH . 
D 4 HOH A 17 517 45 HOH HOH . 
D 4 HOH A 18 518 12 HOH HOH . 
D 4 HOH A 19 519 43 HOH HOH . 
D 4 HOH A 20 520 9 HOH HOH . 
D 4 HOH A 21 521 47 HOH HOH . 
D 4 HOH A 22 522 35 HOH HOH . 
D 4 HOH A 23 523 15 HOH HOH . 
D 4 HOH A 24 524 28 HOH HOH . 
D 4 HOH A 25 525 44 HOH HOH . 
D 4 HOH A 26 526 51 HOH HOH . 
D 4 HOH A 27 527 42 HOH HOH . 
D 4 HOH A 28 528 3 HOH HOH . 
D 4 HOH A 29 529 16 HOH HOH . 
D 4 HOH A 30 530 46 HOH HOH . 
D 4 HOH A 31 531 30 HOH HOH . 
D 4 HOH A 32 532 36 HOH HOH . 
D 4 HOH A 33 533 8 HOH HOH . 
D 4 HOH A 34 534 82 HOH HOH . 
D 4 HOH A 35 535 1 HOH HOH . 
D 4 HOH A 36 536 84 HOH HOH . 
D 4 HOH A 37 537 54 HOH HOH . 
D 4 HOH A 38 538 40 HOH HOH . 
D 4 HOH A 39 539 20 HOH HOH . 
D 4 HOH A 40 540 65 HOH HOH . 
D 4 HOH A 41 541 6 HOH HOH . 
D 4 HOH A 42 542 25 HOH HOH . 
D 4 HOH A 43 543 87 HOH HOH . 
D 4 HOH A 44 544 41 HOH HOH . 
D 4 HOH A 45 545 86 HOH HOH . 
D 4 HOH A 46 546 34 HOH HOH . 
D 4 HOH A 47 547 49 HOH HOH . 
D 4 HOH A 48 548 23 HOH HOH . 
D 4 HOH A 49 549 88 HOH HOH . 
D 4 HOH A 50 550 71 HOH HOH . 
D 4 HOH A 51 551 17 HOH HOH . 
D 4 HOH A 52 552 80 HOH HOH . 
D 4 HOH A 53 553 66 HOH HOH . 
D 4 HOH A 54 554 29 HOH HOH . 
D 4 HOH A 55 555 89 HOH HOH . 
D 4 HOH A 56 556 63 HOH HOH . 
D 4 HOH A 57 557 32 HOH HOH . 
D 4 HOH A 58 558 48 HOH HOH . 
D 4 HOH A 59 559 27 HOH HOH . 
D 4 HOH A 60 560 76 HOH HOH . 
D 4 HOH A 61 561 78 HOH HOH . 
D 4 HOH A 62 562 83 HOH HOH . 
D 4 HOH A 63 563 62 HOH HOH . 
D 4 HOH A 64 564 81 HOH HOH . 
D 4 HOH A 65 565 10 HOH HOH . 
D 4 HOH A 66 566 14 HOH HOH . 
D 4 HOH A 67 567 73 HOH HOH . 
D 4 HOH A 68 568 68 HOH HOH . 
D 4 HOH A 69 569 64 HOH HOH . 
D 4 HOH A 70 570 53 HOH HOH . 
D 4 HOH A 71 571 70 HOH HOH . 
D 4 HOH A 72 572 69 HOH HOH . 
D 4 HOH A 73 573 90 HOH HOH . 
D 4 HOH A 74 574 85 HOH HOH . 
D 4 HOH A 75 575 77 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 -32.516 -19.414 -4.537 1 64.38 ? C1 GOL 401 A 1 
HETATM 2 O O1 GOL . . . B 2 -33.23 -18.628 -3.577 1 58.78 ? O1 GOL 401 A 1 
HETATM 3 C C2 GOL . . . B 2 -32.44 -18.794 -5.931 1 68.14 ? C2 GOL 401 A 1 
HETATM 4 O O2 GOL . . . B 2 -33.183 -19.638 -6.83 1 69.08 ? O2 GOL 401 A 1 
HETATM 5 C C3 GOL . . . B 2 -32.943 -17.343 -5.95 1 71.35 ? C3 GOL 401 A 1 
HETATM 6 O O3 GOL . . . B 2 -33.137 -16.884 -7.287 1 70.95 ? O3 GOL 401 A 1 
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_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
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