data_5CKX # _model_server_result.job_id vxJfkogwbtLZXPuO9hw_Vg _model_server_result.datetime_utc '2024-10-18 12:19:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ckx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":507}' # _entry.id 5CKX # _exptl.entry_id 5CKX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5CKX _cell.length_a 203.397 _cell.length_b 203.397 _cell.length_c 67.049 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CKX _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 J N N ? 6 K N N ? 6 L N N ? 6 S N N ? 6 T N N ? 6 W N N ? 6 Z N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 97 A CYS 87 1_555 E MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc2 A NE2 HIS 379 A HIS 369 1_555 E MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.891 ? metalc ? metalc3 A OE1 GLU 421 A GLU 411 1_555 E MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc4 A OD2 ASP 451 A ASP 441 1_555 E MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc5 B SG CYS 97 B CYS 87 1_555 N MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc6 B NE2 HIS 379 B HIS 369 1_555 N MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc7 B OE1 GLU 421 B GLU 411 1_555 N MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc8 B OE2 GLU 421 B GLU 411 1_555 N MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 303 n n S O2 SO4 doub 304 n n S O3 SO4 sing 305 n n S O4 SO4 sing 306 n n # _atom_sites.entry_id 5CKX _atom_sites.fract_transf_matrix[1][1] 0.004916 _atom_sites.fract_transf_matrix[1][2] 0.002839 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005677 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014914 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MN A 1 501 1 MN MN . F 4 GOL A 1 502 803 GOL GOL . G 5 CL A 1 503 1 CL CL . H 5 CL A 1 504 1 CL CL . I 6 SO4 A 1 505 1 SO4 SO4 . J 6 SO4 A 1 506 3 SO4 SO4 . K 6 SO4 A 1 507 5 SO4 SO4 . L 6 SO4 A 1 508 8 SO4 SO4 . M 7 PHE A 1 509 601 PHE PHE . N 3 MN B 1 501 2 MN MN . O 4 GOL B 1 502 802 GOL GOL . P 4 GOL B 1 503 2 GOL GOL . Q 4 GOL B 1 504 3 GOL GOL . R 5 CL B 1 505 1 CL CL . S 6 SO4 B 1 506 2 SO4 SO4 . T 6 SO4 B 1 507 7 SO4 SO4 . U 7 PHE B 1 508 602 PHE PHE . V 8 TYR B 1 509 701 TYR TYR . W 6 SO4 C 1 101 4 SO4 SO4 . X 9 TSA C 1 102 2 TSA TSA . Y 4 GOL D 1 101 804 GOL GOL . Z 6 SO4 D 1 102 6 SO4 SO4 . AA 9 TSA D 1 103 1 TSA TSA . BA 10 HOH A 1 601 73 HOH HOH . BA 10 HOH A 2 602 67 HOH HOH . BA 10 HOH A 3 603 1 HOH HOH . BA 10 HOH A 4 604 68 HOH HOH . BA 10 HOH A 5 605 77 HOH HOH . BA 10 HOH A 6 606 30 HOH HOH . BA 10 HOH A 7 607 62 HOH HOH . BA 10 HOH A 8 608 9 HOH HOH . BA 10 HOH A 9 609 6 HOH HOH . BA 10 HOH A 10 610 39 HOH HOH . BA 10 HOH A 11 611 7 HOH HOH . BA 10 HOH A 12 612 90 HOH HOH . BA 10 HOH A 13 613 71 HOH HOH . BA 10 HOH A 14 614 91 HOH HOH . BA 10 HOH A 15 615 60 HOH HOH . BA 10 HOH A 16 616 82 HOH HOH . BA 10 HOH A 17 617 75 HOH HOH . CA 10 HOH B 1 601 26 HOH HOH . CA 10 HOH B 2 602 8 HOH HOH . CA 10 HOH B 3 603 2 HOH HOH . CA 10 HOH B 4 604 46 HOH HOH . CA 10 HOH B 5 605 12 HOH HOH . CA 10 HOH B 6 606 5 HOH HOH . CA 10 HOH B 7 607 13 HOH HOH . CA 10 HOH B 8 608 4 HOH HOH . CA 10 HOH B 9 609 37 HOH HOH . CA 10 HOH B 10 610 3 HOH HOH . CA 10 HOH B 11 611 38 HOH HOH . CA 10 HOH B 12 612 74 HOH HOH . CA 10 HOH B 13 613 76 HOH HOH . CA 10 HOH B 14 614 88 HOH HOH . CA 10 HOH B 15 615 24 HOH HOH . CA 10 HOH B 16 616 16 HOH HOH . CA 10 HOH B 17 617 11 HOH HOH . CA 10 HOH B 18 618 32 HOH HOH . CA 10 HOH B 19 619 18 HOH HOH . CA 10 HOH B 20 620 29 HOH HOH . CA 10 HOH B 21 621 64 HOH HOH . CA 10 HOH B 22 622 83 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . K 6 30.438 130.718 20.773 0.87 103.95 ? S SO4 507 A 1 HETATM 2 O O1 SO4 . . . K 6 31.476 131.571 20.2 0.87 99.61 ? O1 SO4 507 A 1 HETATM 3 O O2 SO4 . . . K 6 29.897 129.857 19.726 0.87 97.74 ? O2 SO4 507 A 1 HETATM 4 O O3 SO4 . . . K 6 30.999 129.882 21.83 0.87 87.46 ? O3 SO4 507 A 1 HETATM 5 O O4 SO4 . . . K 6 29.373 131.552 21.326 0.87 85.23 ? O4 SO4 507 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #