data_5CM2 # _model_server_result.job_id BwKQI19g28CRsKgFnMsG3w _model_server_result.datetime_utc '2025-04-09 13:12:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cm2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 5CM2 # _exptl.entry_id 5CM2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CM2 _cell.length_a 176.2 _cell.length_b 176.2 _cell.length_c 176.2 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CM2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 211 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 11 M CYS 11 1_555 C ZN ZN . M ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc2 B SG CYS 16 M CYS 16 1_555 C ZN ZN . M ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc3 B SG CYS 106 M CYS 106 1_555 C ZN ZN . M ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc4 B SG CYS 109 M CYS 109 1_555 C ZN ZN . M ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5CM2 _atom_sites.fract_transf_matrix[1][1] 0.005675 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005675 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005675 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN M 1 201 201 ZN ZN . D 4 HOH Z 1 301 351 HOH HOH . D 4 HOH Z 2 302 311 HOH HOH . D 4 HOH Z 3 303 355 HOH HOH . D 4 HOH Z 4 304 319 HOH HOH . D 4 HOH Z 5 305 328 HOH HOH . D 4 HOH Z 6 306 339 HOH HOH . D 4 HOH Z 7 307 306 HOH HOH . D 4 HOH Z 8 308 307 HOH HOH . D 4 HOH Z 9 309 342 HOH HOH . D 4 HOH Z 10 310 305 HOH HOH . D 4 HOH Z 11 311 344 HOH HOH . D 4 HOH Z 12 312 335 HOH HOH . D 4 HOH Z 13 313 322 HOH HOH . D 4 HOH Z 14 314 314 HOH HOH . D 4 HOH Z 15 315 325 HOH HOH . D 4 HOH Z 16 316 340 HOH HOH . D 4 HOH Z 17 317 331 HOH HOH . D 4 HOH Z 18 318 333 HOH HOH . D 4 HOH Z 19 319 303 HOH HOH . D 4 HOH Z 20 320 308 HOH HOH . D 4 HOH Z 21 321 327 HOH HOH . D 4 HOH Z 22 322 304 HOH HOH . D 4 HOH Z 23 323 312 HOH HOH . D 4 HOH Z 24 324 309 HOH HOH . D 4 HOH Z 25 325 310 HOH HOH . D 4 HOH Z 26 326 315 HOH HOH . D 4 HOH Z 27 327 329 HOH HOH . D 4 HOH Z 28 328 334 HOH HOH . D 4 HOH Z 29 329 321 HOH HOH . D 4 HOH Z 30 330 317 HOH HOH . D 4 HOH Z 31 331 346 HOH HOH . D 4 HOH Z 32 332 358 HOH HOH . D 4 HOH Z 33 333 302 HOH HOH . D 4 HOH Z 34 334 348 HOH HOH . D 4 HOH Z 35 335 352 HOH HOH . D 4 HOH Z 36 336 354 HOH HOH . D 4 HOH Z 37 337 357 HOH HOH . D 4 HOH Z 38 338 332 HOH HOH . D 4 HOH Z 39 339 341 HOH HOH . D 4 HOH Z 40 340 316 HOH HOH . D 4 HOH Z 41 341 330 HOH HOH . D 4 HOH Z 42 342 301 HOH HOH . D 4 HOH Z 43 343 336 HOH HOH . D 4 HOH Z 44 344 356 HOH HOH . D 4 HOH Z 45 345 345 HOH HOH . D 4 HOH Z 46 346 324 HOH HOH . D 4 HOH Z 47 347 313 HOH HOH . D 4 HOH Z 48 348 360 HOH HOH . D 4 HOH Z 49 349 337 HOH HOH . D 4 HOH Z 50 350 349 HOH HOH . D 4 HOH Z 51 351 320 HOH HOH . D 4 HOH Z 52 352 338 HOH HOH . D 4 HOH Z 53 353 318 HOH HOH . D 4 HOH Z 54 354 326 HOH HOH . D 4 HOH Z 55 355 343 HOH HOH . D 4 HOH Z 56 356 353 HOH HOH . D 4 HOH Z 57 357 361 HOH HOH . D 4 HOH Z 58 358 359 HOH HOH . D 4 HOH Z 59 359 323 HOH HOH . D 4 HOH Z 60 360 347 HOH HOH . D 4 HOH Z 61 361 350 HOH HOH . E 4 HOH M 1 301 307 HOH HOH . E 4 HOH M 2 302 303 HOH HOH . E 4 HOH M 3 303 305 HOH HOH . E 4 HOH M 4 304 315 HOH HOH . E 4 HOH M 5 305 313 HOH HOH . E 4 HOH M 6 306 308 HOH HOH . E 4 HOH M 7 307 304 HOH HOH . E 4 HOH M 8 308 302 HOH HOH . E 4 HOH M 9 309 301 HOH HOH . E 4 HOH M 10 310 310 HOH HOH . E 4 HOH M 11 311 309 HOH HOH . E 4 HOH M 12 312 306 HOH HOH . E 4 HOH M 13 313 311 HOH HOH . E 4 HOH M 14 314 314 HOH HOH . E 4 HOH M 15 315 312 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 3.381 _atom_site.Cartn_y 24.45 _atom_site.Cartn_z 69.022 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 76.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 201 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 405 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #