data_5COE # _model_server_result.job_id EttDZlIt48OjpiNdQQbt4g _model_server_result.datetime_utc '2024-11-14 06:55:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5coe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5COE # _exptl.entry_id 5COE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.04 _cell.angle_gamma 90 _cell.entry_id 5COE _cell.length_a 53.282 _cell.length_b 63.081 _cell.length_c 57.381 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5COE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 43 A CYS 70 1_555 A SG CYS 69 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 47 A CYS 74 1_555 A SG CYS 57 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf3 A SG CYS 101 A CYS 128 1_555 A SG CYS 179 A CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 A SG CYS 122 A CYS 149 1_555 A SG CYS 162 A CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf5 A SG CYS 150 A CYS 177 1_555 A SG CYS 174 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf6 B SG CYS 43 B CYS 70 1_555 B SG CYS 69 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf7 B SG CYS 47 B CYS 74 1_555 B SG CYS 57 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf8 B SG CYS 101 B CYS 128 1_555 B SG CYS 179 B CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf9 B SG CYS 122 B CYS 149 1_555 B SG CYS 162 B CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf10 B SG CYS 150 B CYS 177 1_555 B SG CYS 174 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 5COE _atom_sites.fract_transf_matrix[1][1] 0.018768 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001655 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015853 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017495 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EPE B 1 301 3184 EPE EPE . D 3 HOH A 1 301 91 HOH HOH . D 3 HOH A 2 302 124 HOH HOH . D 3 HOH A 3 303 32 HOH HOH . D 3 HOH A 4 304 30 HOH HOH . D 3 HOH A 5 305 9 HOH HOH . D 3 HOH A 6 306 74 HOH HOH . D 3 HOH A 7 307 19 HOH HOH . D 3 HOH A 8 308 59 HOH HOH . D 3 HOH A 9 309 41 HOH HOH . D 3 HOH A 10 310 45 HOH HOH . D 3 HOH A 11 311 22 HOH HOH . D 3 HOH A 12 312 29 HOH HOH . D 3 HOH A 13 313 90 HOH HOH . D 3 HOH A 14 314 76 HOH HOH . D 3 HOH A 15 315 42 HOH HOH . D 3 HOH A 16 316 71 HOH HOH . D 3 HOH A 17 317 44 HOH HOH . D 3 HOH A 18 318 100 HOH HOH . D 3 HOH A 19 319 13 HOH HOH . D 3 HOH A 20 320 35 HOH HOH . D 3 HOH A 21 321 73 HOH HOH . D 3 HOH A 22 322 77 HOH HOH . D 3 HOH A 23 323 37 HOH HOH . D 3 HOH A 24 324 111 HOH HOH . D 3 HOH A 25 325 23 HOH HOH . D 3 HOH A 26 326 8 HOH HOH . D 3 HOH A 27 327 75 HOH HOH . D 3 HOH A 28 328 134 HOH HOH . D 3 HOH A 29 329 112 HOH HOH . D 3 HOH A 30 330 15 HOH HOH . D 3 HOH A 31 331 99 HOH HOH . D 3 HOH A 32 332 101 HOH HOH . D 3 HOH A 33 333 129 HOH HOH . D 3 HOH A 34 334 65 HOH HOH . D 3 HOH A 35 335 5 HOH HOH . D 3 HOH A 36 336 84 HOH HOH . D 3 HOH A 37 337 127 HOH HOH . D 3 HOH A 38 338 66 HOH HOH . D 3 HOH A 39 339 39 HOH HOH . D 3 HOH A 40 340 86 HOH HOH . D 3 HOH A 41 341 60 HOH HOH . D 3 HOH A 42 342 12 HOH HOH . D 3 HOH A 43 343 31 HOH HOH . D 3 HOH A 44 344 14 HOH HOH . D 3 HOH A 45 345 103 HOH HOH . D 3 HOH A 46 346 126 HOH HOH . D 3 HOH A 47 347 64 HOH HOH . D 3 HOH A 48 348 118 HOH HOH . D 3 HOH A 49 349 57 HOH HOH . D 3 HOH A 50 350 125 HOH HOH . D 3 HOH A 51 351 110 HOH HOH . D 3 HOH A 52 352 135 HOH HOH . D 3 HOH A 53 353 106 HOH HOH . D 3 HOH A 54 354 105 HOH HOH . D 3 HOH A 55 355 133 HOH HOH . D 3 HOH A 56 356 132 HOH HOH . E 3 HOH B 1 401 27 HOH HOH . E 3 HOH B 2 402 80 HOH HOH . E 3 HOH B 3 403 53 HOH HOH . E 3 HOH B 4 404 107 HOH HOH . E 3 HOH B 5 405 18 HOH HOH . E 3 HOH B 6 406 55 HOH HOH . E 3 HOH B 7 407 47 HOH HOH . E 3 HOH B 8 408 120 HOH HOH . E 3 HOH B 9 409 83 HOH HOH . E 3 HOH B 10 410 93 HOH HOH . E 3 HOH B 11 411 46 HOH HOH . E 3 HOH B 12 412 72 HOH HOH . E 3 HOH B 13 413 130 HOH HOH . E 3 HOH B 14 414 6 HOH HOH . E 3 HOH B 15 415 34 HOH HOH . E 3 HOH B 16 416 54 HOH HOH . E 3 HOH B 17 417 115 HOH HOH . E 3 HOH B 18 418 21 HOH HOH . E 3 HOH B 19 419 63 HOH HOH . E 3 HOH B 20 420 137 HOH HOH . E 3 HOH B 21 421 116 HOH HOH . E 3 HOH B 22 422 36 HOH HOH . E 3 HOH B 23 423 25 HOH HOH . E 3 HOH B 24 424 97 HOH HOH . E 3 HOH B 25 425 33 HOH HOH . E 3 HOH B 26 426 2 HOH HOH . E 3 HOH B 27 427 81 HOH HOH . E 3 HOH B 28 428 95 HOH HOH . E 3 HOH B 29 429 119 HOH HOH . E 3 HOH B 30 430 98 HOH HOH . E 3 HOH B 31 431 82 HOH HOH . E 3 HOH B 32 432 58 HOH HOH . E 3 HOH B 33 433 50 HOH HOH . E 3 HOH B 34 434 94 HOH HOH . E 3 HOH B 35 435 3 HOH HOH . E 3 HOH B 36 436 79 HOH HOH . E 3 HOH B 37 437 123 HOH HOH . E 3 HOH B 38 438 109 HOH HOH . E 3 HOH B 39 439 16 HOH HOH . E 3 HOH B 40 440 52 HOH HOH . E 3 HOH B 41 441 113 HOH HOH . E 3 HOH B 42 442 108 HOH HOH . E 3 HOH B 43 443 24 HOH HOH . E 3 HOH B 44 444 10 HOH HOH . E 3 HOH B 45 445 20 HOH HOH . E 3 HOH B 46 446 96 HOH HOH . E 3 HOH B 47 447 131 HOH HOH . E 3 HOH B 48 448 17 HOH HOH . E 3 HOH B 49 449 122 HOH HOH . E 3 HOH B 50 450 38 HOH HOH . E 3 HOH B 51 451 67 HOH HOH . E 3 HOH B 52 452 11 HOH HOH . E 3 HOH B 53 453 48 HOH HOH . E 3 HOH B 54 454 7 HOH HOH . E 3 HOH B 55 455 87 HOH HOH . E 3 HOH B 56 456 56 HOH HOH . E 3 HOH B 57 457 1 HOH HOH . E 3 HOH B 58 458 28 HOH HOH . E 3 HOH B 59 459 92 HOH HOH . E 3 HOH B 60 460 43 HOH HOH . E 3 HOH B 61 461 26 HOH HOH . E 3 HOH B 62 462 49 HOH HOH . E 3 HOH B 63 463 4 HOH HOH . E 3 HOH B 64 464 114 HOH HOH . E 3 HOH B 65 465 51 HOH HOH . E 3 HOH B 66 466 121 HOH HOH . E 3 HOH B 67 467 78 HOH HOH . E 3 HOH B 68 468 104 HOH HOH . E 3 HOH B 69 469 85 HOH HOH . E 3 HOH B 70 470 70 HOH HOH . E 3 HOH B 71 471 69 HOH HOH . E 3 HOH B 72 472 117 HOH HOH . E 3 HOH B 73 473 68 HOH HOH . E 3 HOH B 74 474 136 HOH HOH . E 3 HOH B 75 475 61 HOH HOH . E 3 HOH B 76 476 128 HOH HOH . E 3 HOH B 77 477 89 HOH HOH . E 3 HOH B 78 478 40 HOH HOH . E 3 HOH B 79 479 102 HOH HOH . E 3 HOH B 80 480 88 HOH HOH . E 3 HOH B 81 481 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . C 2 -3.44 26.61 -11.424 1 81.39 ? N1 EPE 301 B 1 HETATM 2 C C2 EPE . . . C 2 -3.137 26.392 -9.992 1 78.82 ? C2 EPE 301 B 1 HETATM 3 C C3 EPE . . . C 2 -1.637 26.133 -9.754 1 78.85 ? C3 EPE 301 B 1 HETATM 4 N N4 EPE . . . C 2 -1.106 24.981 -10.534 1 76.24 ? N4 EPE 301 B 1 HETATM 5 C C5 EPE . . . C 2 -2.002 24.562 -11.63 1 77.65 ? C5 EPE 301 B 1 HETATM 6 C C6 EPE . . . C 2 -2.613 25.784 -12.343 1 80.08 ? C6 EPE 301 B 1 HETATM 7 C C7 EPE . . . C 2 -0.829 23.831 -9.649 1 72.06 ? C7 EPE 301 B 1 HETATM 8 C C8 EPE . . . C 2 0.271 24.165 -8.631 1 67.63 ? C8 EPE 301 B 1 HETATM 9 O O8 EPE . . . C 2 -0.032 23.51 -7.397 1 62.84 ? O8 EPE 301 B 1 HETATM 10 C C9 EPE . . . C 2 -3.343 28.041 -11.795 1 80.7 ? C9 EPE 301 B 1 HETATM 11 C C10 EPE . . . C 2 -4.642 28.799 -11.487 1 81.2 ? C10 EPE 301 B 1 HETATM 12 S S EPE . . . C 2 -5.384 29.617 -12.955 1 83.35 ? S EPE 301 B 1 HETATM 13 O O1S EPE . . . C 2 -6.113 28.549 -13.727 1 85.06 ? O1S EPE 301 B 1 HETATM 14 O O2S EPE . . . C 2 -4.319 30.245 -13.827 1 80.21 ? O2S EPE 301 B 1 HETATM 15 O O3S EPE . . . C 2 -6.361 30.672 -12.507 1 78.73 ? O3S EPE 301 B 1 # _model_server_stats.io_time_ms 112 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #