data_5COI # _model_server_result.job_id OPnNALaZhNE2eVLpLQ15bw _model_server_result.datetime_utc '2024-11-22 05:13:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5coi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5COI # _exptl.entry_id 5COI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 402.464 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-({[(1-ethyl-2-oxo-1,2-dihydrobenzo[cd]indol-6-yl)sulfonyl]amino}methyl)cyclopentanecarboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.87 _cell.angle_gamma 90 _cell.entry_id 5COI _cell.length_a 29.88 _cell.length_b 45.56 _cell.length_c 47.31 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5COI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H22 N2 O5 S' _chem_comp.formula_weight 402.464 _chem_comp.id 55K _chem_comp.mon_nstd_flag . _chem_comp.name '1-({[(1-ethyl-2-oxo-1,2-dihydrobenzo[cd]indol-6-yl)sulfonyl]amino}methyl)cyclopentanecarboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAW CAX 55K sing 1 n n CAW CAV 55K sing 2 n n CAX CAY 55K sing 3 n n CAV CAU 55K sing 4 n n OBA CAZ 55K doub 5 n n CAY CAU 55K sing 6 n n CAU CAZ 55K sing 7 n n CAU CAT 55K sing 8 n n CAZ OBB 55K sing 9 n n CAT NAS 55K sing 10 n n NAS SAP 55K sing 11 n n OAQ SAP 55K doub 12 n n SAP OAR 55K doub 13 n n SAP CAC 55K sing 14 n n CAC CAD 55K doub 15 n y CAC CAB 55K sing 16 n y CAG CAD 55K sing 17 n y CAG CAH 55K doub 18 n y CAD CAE 55K sing 19 n y CAB CAA 55K doub 20 n y CAH CAI 55K sing 21 n y CAE CAF 55K doub 22 n y CAE CAJ 55K sing 23 n y CAA CAF 55K sing 24 n y CAI CAJ 55K doub 25 n y CAF NAK 55K sing 26 n n CAJ CAL 55K sing 27 n n NAK CAL 55K sing 28 n n NAK CAN 55K sing 29 n n CAL OAM 55K doub 30 n n CAO CAN 55K sing 31 n n CAV H1 55K sing 32 n n CAV H2 55K sing 33 n n CAW H3 55K sing 34 n n CAW H4 55K sing 35 n n CAX H5 55K sing 36 n n CAX H6 55K sing 37 n n CAY H7 55K sing 38 n n CAY H8 55K sing 39 n n OBB H9 55K sing 40 n n CAT H10 55K sing 41 n n CAT H11 55K sing 42 n n NAS H12 55K sing 43 n n CAB H13 55K sing 44 n n CAA H14 55K sing 45 n n CAG H15 55K sing 46 n n CAH H16 55K sing 47 n n CAI H17 55K sing 48 n n CAN H18 55K sing 49 n n CAN H19 55K sing 50 n n CAO H20 55K sing 51 n n CAO H21 55K sing 52 n n CAO H22 55K sing 53 n n # _atom_sites.entry_id 5COI _atom_sites.fract_transf_matrix[1][1] 0.033467 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004032 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021949 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02129 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 55K A 1 201 1 55K 55K . C 3 HOH A 1 301 89 HOH HOH . C 3 HOH A 2 302 109 HOH HOH . C 3 HOH A 3 303 122 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 52 HOH HOH . C 3 HOH A 6 306 67 HOH HOH . C 3 HOH A 7 307 77 HOH HOH . C 3 HOH A 8 308 13 HOH HOH . C 3 HOH A 9 309 2 HOH HOH . C 3 HOH A 10 310 20 HOH HOH . C 3 HOH A 11 311 42 HOH HOH . C 3 HOH A 12 312 15 HOH HOH . C 3 HOH A 13 313 18 HOH HOH . C 3 HOH A 14 314 6 HOH HOH . C 3 HOH A 15 315 39 HOH HOH . C 3 HOH A 16 316 24 HOH HOH . C 3 HOH A 17 317 30 HOH HOH . C 3 HOH A 18 318 105 HOH HOH . C 3 HOH A 19 319 116 HOH HOH . C 3 HOH A 20 320 32 HOH HOH . C 3 HOH A 21 321 106 HOH HOH . C 3 HOH A 22 322 34 HOH HOH . C 3 HOH A 23 323 8 HOH HOH . C 3 HOH A 24 324 9 HOH HOH . C 3 HOH A 25 325 37 HOH HOH . C 3 HOH A 26 326 16 HOH HOH . C 3 HOH A 27 327 64 HOH HOH . C 3 HOH A 28 328 48 HOH HOH . C 3 HOH A 29 329 19 HOH HOH . C 3 HOH A 30 330 96 HOH HOH . C 3 HOH A 31 331 75 HOH HOH . C 3 HOH A 32 332 25 HOH HOH . C 3 HOH A 33 333 3 HOH HOH . C 3 HOH A 34 334 40 HOH HOH . C 3 HOH A 35 335 124 HOH HOH . C 3 HOH A 36 336 28 HOH HOH . C 3 HOH A 37 337 87 HOH HOH . C 3 HOH A 38 338 23 HOH HOH . C 3 HOH A 39 339 46 HOH HOH . C 3 HOH A 40 340 5 HOH HOH . C 3 HOH A 41 341 7 HOH HOH . C 3 HOH A 42 342 35 HOH HOH . C 3 HOH A 43 343 115 HOH HOH . C 3 HOH A 44 344 100 HOH HOH . C 3 HOH A 45 345 33 HOH HOH . C 3 HOH A 46 346 12 HOH HOH . C 3 HOH A 47 347 47 HOH HOH . C 3 HOH A 48 348 55 HOH HOH . C 3 HOH A 49 349 111 HOH HOH . C 3 HOH A 50 350 125 HOH HOH . C 3 HOH A 51 351 29 HOH HOH . C 3 HOH A 52 352 22 HOH HOH . C 3 HOH A 53 353 1 HOH HOH . C 3 HOH A 54 354 85 HOH HOH . C 3 HOH A 55 355 113 HOH HOH . C 3 HOH A 56 356 49 HOH HOH . C 3 HOH A 57 357 61 HOH HOH . C 3 HOH A 58 358 58 HOH HOH . C 3 HOH A 59 359 63 HOH HOH . C 3 HOH A 60 360 14 HOH HOH . C 3 HOH A 61 361 27 HOH HOH . C 3 HOH A 62 362 45 HOH HOH . C 3 HOH A 63 363 119 HOH HOH . C 3 HOH A 64 364 93 HOH HOH . C 3 HOH A 65 365 66 HOH HOH . C 3 HOH A 66 366 43 HOH HOH . C 3 HOH A 67 367 95 HOH HOH . C 3 HOH A 68 368 17 HOH HOH . C 3 HOH A 69 369 31 HOH HOH . C 3 HOH A 70 370 110 HOH HOH . C 3 HOH A 71 371 36 HOH HOH . C 3 HOH A 72 372 117 HOH HOH . C 3 HOH A 73 373 98 HOH HOH . C 3 HOH A 74 374 69 HOH HOH . C 3 HOH A 75 375 118 HOH HOH . C 3 HOH A 76 376 68 HOH HOH . C 3 HOH A 77 377 91 HOH HOH . C 3 HOH A 78 378 65 HOH HOH . C 3 HOH A 79 379 59 HOH HOH . C 3 HOH A 80 380 41 HOH HOH . C 3 HOH A 81 381 103 HOH HOH . C 3 HOH A 82 382 107 HOH HOH . C 3 HOH A 83 383 21 HOH HOH . C 3 HOH A 84 384 51 HOH HOH . C 3 HOH A 85 385 94 HOH HOH . C 3 HOH A 86 386 108 HOH HOH . C 3 HOH A 87 387 86 HOH HOH . C 3 HOH A 88 388 80 HOH HOH . C 3 HOH A 89 389 10 HOH HOH . C 3 HOH A 90 390 84 HOH HOH . C 3 HOH A 91 391 38 HOH HOH . C 3 HOH A 92 392 123 HOH HOH . C 3 HOH A 93 393 120 HOH HOH . C 3 HOH A 94 394 126 HOH HOH . C 3 HOH A 95 395 81 HOH HOH . C 3 HOH A 96 396 70 HOH HOH . C 3 HOH A 97 397 79 HOH HOH . C 3 HOH A 98 398 88 HOH HOH . C 3 HOH A 99 399 60 HOH HOH . C 3 HOH A 100 400 72 HOH HOH . C 3 HOH A 101 401 50 HOH HOH . C 3 HOH A 102 402 104 HOH HOH . C 3 HOH A 103 403 102 HOH HOH . C 3 HOH A 104 404 57 HOH HOH . C 3 HOH A 105 405 114 HOH HOH . C 3 HOH A 106 406 112 HOH HOH . C 3 HOH A 107 407 11 HOH HOH . C 3 HOH A 108 408 92 HOH HOH . C 3 HOH A 109 409 44 HOH HOH . C 3 HOH A 110 410 56 HOH HOH . C 3 HOH A 111 411 90 HOH HOH . C 3 HOH A 112 412 99 HOH HOH . C 3 HOH A 113 413 121 HOH HOH . C 3 HOH A 114 414 82 HOH HOH . C 3 HOH A 115 415 76 HOH HOH . C 3 HOH A 116 416 73 HOH HOH . C 3 HOH A 117 417 74 HOH HOH . C 3 HOH A 118 418 26 HOH HOH . C 3 HOH A 119 419 97 HOH HOH . C 3 HOH A 120 420 83 HOH HOH . C 3 HOH A 121 421 62 HOH HOH . C 3 HOH A 122 422 54 HOH HOH . C 3 HOH A 123 423 78 HOH HOH . C 3 HOH A 124 424 53 HOH HOH . C 3 HOH A 125 425 101 HOH HOH . C 3 HOH A 126 426 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAV 55K . . . B 2 4.971 9.752 -3.432 1 23.17 ? CAV 55K 201 A 1 HETATM 2 C CAW 55K . . . B 2 5.589 8.747 -4.36 1 23.16 ? CAW 55K 201 A 1 HETATM 3 C CAX 55K . . . B 2 5.705 7.486 -3.516 1 24.54 ? CAX 55K 201 A 1 HETATM 4 C CAY 55K . . . B 2 4.835 7.537 -2.353 1 25.67 ? CAY 55K 201 A 1 HETATM 5 C CAU 55K . . . B 2 4.508 9.02 -2.163 1 25.82 ? CAU 55K 201 A 1 HETATM 6 C CAZ 55K . . . B 2 2.979 9.107 -1.918 1 30.56 ? CAZ 55K 201 A 1 HETATM 7 O OBB 55K . . . B 2 2.598 9.231 -0.737 1 38.37 ? OBB 55K 201 A 1 HETATM 8 O OBA 55K . . . B 2 2.214 8.995 -2.898 1 37.24 ? OBA 55K 201 A 1 HETATM 9 C CAT 55K . . . B 2 5.287 9.549 -0.98 1 23.12 ? CAT 55K 201 A 1 HETATM 10 N NAS 55K . . . B 2 4.786 10.923 -0.733 1 21 ? NAS 55K 201 A 1 HETATM 11 S SAP 55K . . . B 2 5.695 11.697 0.482 1 19.31 ? SAP 55K 201 A 1 HETATM 12 O OAQ 55K . . . B 2 7.107 11.719 0.118 1 18.47 ? OAQ 55K 201 A 1 HETATM 13 O OAR 55K . . . B 2 5.094 13.063 0.707 1 19.28 ? OAR 55K 201 A 1 HETATM 14 C CAC 55K . . . B 2 5.546 10.724 1.964 1 15.94 ? CAC 55K 201 A 1 HETATM 15 C CAB 55K . . . B 2 6.711 10.189 2.531 1 14.78 ? CAB 55K 201 A 1 HETATM 16 C CAA 55K . . . B 2 6.575 9.394 3.676 1 13.59 ? CAA 55K 201 A 1 HETATM 17 C CAF 55K . . . B 2 5.366 9.162 4.204 1 13.36 ? CAF 55K 201 A 1 HETATM 18 C CAE 55K . . . B 2 4.257 9.65 3.611 1 13.64 ? CAE 55K 201 A 1 HETATM 19 C CAD 55K . . . B 2 4.287 10.448 2.518 1 14.46 ? CAD 55K 201 A 1 HETATM 20 C CAG 55K . . . B 2 3.038 10.932 2.025 1 14.42 ? CAG 55K 201 A 1 HETATM 21 C CAH 55K . . . B 2 1.883 10.538 2.717 1 14.67 ? CAH 55K 201 A 1 HETATM 22 C CAI 55K . . . B 2 1.963 9.702 3.87 1 15.36 ? CAI 55K 201 A 1 HETATM 23 C CAJ 55K . . . B 2 3.175 9.261 4.307 1 14.1 ? CAJ 55K 201 A 1 HETATM 24 C CAL 55K . . . B 2 3.652 8.468 5.334 1 12.89 ? CAL 55K 201 A 1 HETATM 25 O OAM 55K . . . B 2 3.013 7.748 6.119 1 13.34 ? OAM 55K 201 A 1 HETATM 26 N NAK 55K . . . B 2 4.979 8.414 5.244 1 12.93 ? NAK 55K 201 A 1 HETATM 27 C CAN 55K . . . B 2 5.855 7.68 6.158 1 12.95 ? CAN 55K 201 A 1 HETATM 28 C CAO 55K . . . B 2 6.074 6.24 5.654 1 12.56 ? CAO 55K 201 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 28 #