data_5CPG
#
_model_server_result.job_id            -boPs3QDHcwNpenDoGZOIg 
_model_server_result.datetime_utc      '2024-10-10 06:28:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cpg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":202}' 
#
_entry.id    5CPG 
#
_exptl.entry_id    5CPG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CPG 
_cell.length_a            63.53 
_cell.length_b            65.721 
_cell.length_c            77.453 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CPG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 116 n n 
C1 C2 GOL sing 117 n n 
C1 H11 GOL sing 118 n n 
C1 H12 GOL sing 119 n n 
O1 HO1 GOL sing 120 n n 
C2 O2 GOL sing 121 n n 
C2 C3 GOL sing 122 n n 
C2 H2 GOL sing 123 n n 
O2 HO2 GOL sing 124 n n 
C3 O3 GOL sing 125 n n 
C3 H31 GOL sing 126 n n 
C3 H32 GOL sing 127 n n 
O3 HO3 GOL sing 128 n n 
#
_atom_sites.entry_id                     5CPG 
_atom_sites.fract_transf_matrix[1][1]    0.015741 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015216 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012911 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 201 2 GOL GOL . 
D 2 GOL A 1 202 3 GOL GOL . 
E 2 GOL A 1 203 4 GOL GOL . 
F 2 GOL A 1 204 8 GOL GOL . 
G 2 GOL B 1 201 1 GOL GOL . 
H 2 GOL B 1 202 5 GOL GOL . 
I 2 GOL B 1 203 6 GOL GOL . 
J 2 GOL B 1 204 7 GOL GOL . 
K 3 HOH A 1 301 200 HOH HOH . 
K 3 HOH A 2 302 125 HOH HOH . 
K 3 HOH A 3 303 117 HOH HOH . 
K 3 HOH A 4 304 216 HOH HOH . 
K 3 HOH A 5 305 126 HOH HOH . 
K 3 HOH A 6 306 130 HOH HOH . 
K 3 HOH A 7 307 146 HOH HOH . 
K 3 HOH A 8 308 83 HOH HOH . 
K 3 HOH A 9 309 77 HOH HOH . 
K 3 HOH A 10 310 142 HOH HOH . 
K 3 HOH A 11 311 133 HOH HOH . 
K 3 HOH A 12 312 120 HOH HOH . 
K 3 HOH A 13 313 71 HOH HOH . 
K 3 HOH A 14 314 82 HOH HOH . 
K 3 HOH A 15 315 110 HOH HOH . 
K 3 HOH A 16 316 7 HOH HOH . 
K 3 HOH A 17 317 76 HOH HOH . 
K 3 HOH A 18 318 204 HOH HOH . 
K 3 HOH A 19 319 105 HOH HOH . 
K 3 HOH A 20 320 101 HOH HOH . 
K 3 HOH A 21 321 167 HOH HOH . 
K 3 HOH A 22 322 115 HOH HOH . 
K 3 HOH A 23 323 38 HOH HOH . 
K 3 HOH A 24 324 221 HOH HOH . 
K 3 HOH A 25 325 53 HOH HOH . 
K 3 HOH A 26 326 47 HOH HOH . 
K 3 HOH A 27 327 43 HOH HOH . 
K 3 HOH A 28 328 109 HOH HOH . 
K 3 HOH A 29 329 201 HOH HOH . 
K 3 HOH A 30 330 107 HOH HOH . 
K 3 HOH A 31 331 29 HOH HOH . 
K 3 HOH A 32 332 67 HOH HOH . 
K 3 HOH A 33 333 21 HOH HOH . 
K 3 HOH A 34 334 113 HOH HOH . 
K 3 HOH A 35 335 210 HOH HOH . 
K 3 HOH A 36 336 32 HOH HOH . 
K 3 HOH A 37 337 64 HOH HOH . 
K 3 HOH A 38 338 91 HOH HOH . 
K 3 HOH A 39 339 5 HOH HOH . 
K 3 HOH A 40 340 218 HOH HOH . 
K 3 HOH A 41 341 199 HOH HOH . 
K 3 HOH A 42 342 22 HOH HOH . 
K 3 HOH A 43 343 17 HOH HOH . 
K 3 HOH A 44 344 13 HOH HOH . 
K 3 HOH A 45 345 28 HOH HOH . 
K 3 HOH A 46 346 52 HOH HOH . 
K 3 HOH A 47 347 74 HOH HOH . 
K 3 HOH A 48 348 100 HOH HOH . 
K 3 HOH A 49 349 155 HOH HOH . 
K 3 HOH A 50 350 152 HOH HOH . 
K 3 HOH A 51 351 143 HOH HOH . 
K 3 HOH A 52 352 8 HOH HOH . 
K 3 HOH A 53 353 11 HOH HOH . 
K 3 HOH A 54 354 84 HOH HOH . 
K 3 HOH A 55 355 9 HOH HOH . 
K 3 HOH A 56 356 172 HOH HOH . 
K 3 HOH A 57 357 89 HOH HOH . 
K 3 HOH A 58 358 106 HOH HOH . 
K 3 HOH A 59 359 66 HOH HOH . 
K 3 HOH A 60 360 129 HOH HOH . 
K 3 HOH A 61 361 104 HOH HOH . 
K 3 HOH A 62 362 158 HOH HOH . 
K 3 HOH A 63 363 16 HOH HOH . 
K 3 HOH A 64 364 138 HOH HOH . 
K 3 HOH A 65 365 30 HOH HOH . 
K 3 HOH A 66 366 202 HOH HOH . 
K 3 HOH A 67 367 93 HOH HOH . 
K 3 HOH A 68 368 127 HOH HOH . 
K 3 HOH A 69 369 165 HOH HOH . 
K 3 HOH A 70 370 4 HOH HOH . 
K 3 HOH A 71 371 97 HOH HOH . 
K 3 HOH A 72 372 121 HOH HOH . 
K 3 HOH A 73 373 213 HOH HOH . 
K 3 HOH A 74 374 68 HOH HOH . 
K 3 HOH A 75 375 177 HOH HOH . 
K 3 HOH A 76 376 233 HOH HOH . 
K 3 HOH A 77 377 123 HOH HOH . 
K 3 HOH A 78 378 166 HOH HOH . 
K 3 HOH A 79 379 20 HOH HOH . 
K 3 HOH A 80 380 234 HOH HOH . 
K 3 HOH A 81 381 222 HOH HOH . 
K 3 HOH A 82 382 92 HOH HOH . 
K 3 HOH A 83 383 114 HOH HOH . 
K 3 HOH A 84 384 161 HOH HOH . 
K 3 HOH A 85 385 59 HOH HOH . 
K 3 HOH A 86 386 183 HOH HOH . 
K 3 HOH A 87 387 49 HOH HOH . 
K 3 HOH A 88 388 188 HOH HOH . 
K 3 HOH A 89 389 212 HOH HOH . 
K 3 HOH A 90 390 217 HOH HOH . 
K 3 HOH A 91 391 159 HOH HOH . 
K 3 HOH A 92 392 190 HOH HOH . 
K 3 HOH A 93 393 151 HOH HOH . 
K 3 HOH A 94 394 209 HOH HOH . 
K 3 HOH A 95 395 150 HOH HOH . 
K 3 HOH A 96 396 96 HOH HOH . 
K 3 HOH A 97 397 98 HOH HOH . 
K 3 HOH A 98 398 99 HOH HOH . 
K 3 HOH A 99 399 186 HOH HOH . 
K 3 HOH A 100 400 90 HOH HOH . 
K 3 HOH A 101 401 141 HOH HOH . 
K 3 HOH A 102 402 208 HOH HOH . 
K 3 HOH A 103 403 168 HOH HOH . 
K 3 HOH A 104 404 112 HOH HOH . 
K 3 HOH A 105 405 62 HOH HOH . 
K 3 HOH A 106 406 230 HOH HOH . 
K 3 HOH A 107 407 180 HOH HOH . 
L 3 HOH B 1 301 88 HOH HOH . 
L 3 HOH B 2 302 124 HOH HOH . 
L 3 HOH B 3 303 132 HOH HOH . 
L 3 HOH B 4 304 175 HOH HOH . 
L 3 HOH B 5 305 72 HOH HOH . 
L 3 HOH B 6 306 185 HOH HOH . 
L 3 HOH B 7 307 118 HOH HOH . 
L 3 HOH B 8 308 170 HOH HOH . 
L 3 HOH B 9 309 228 HOH HOH . 
L 3 HOH B 10 310 95 HOH HOH . 
L 3 HOH B 11 311 34 HOH HOH . 
L 3 HOH B 12 312 85 HOH HOH . 
L 3 HOH B 13 313 227 HOH HOH . 
L 3 HOH B 14 314 12 HOH HOH . 
L 3 HOH B 15 315 57 HOH HOH . 
L 3 HOH B 16 316 69 HOH HOH . 
L 3 HOH B 17 317 42 HOH HOH . 
L 3 HOH B 18 318 173 HOH HOH . 
L 3 HOH B 19 319 111 HOH HOH . 
L 3 HOH B 20 320 144 HOH HOH . 
L 3 HOH B 21 321 119 HOH HOH . 
L 3 HOH B 22 322 81 HOH HOH . 
L 3 HOH B 23 323 78 HOH HOH . 
L 3 HOH B 24 324 40 HOH HOH . 
L 3 HOH B 25 325 103 HOH HOH . 
L 3 HOH B 26 326 198 HOH HOH . 
L 3 HOH B 27 327 27 HOH HOH . 
L 3 HOH B 28 328 160 HOH HOH . 
L 3 HOH B 29 329 206 HOH HOH . 
L 3 HOH B 30 330 33 HOH HOH . 
L 3 HOH B 31 331 10 HOH HOH . 
L 3 HOH B 32 332 1 HOH HOH . 
L 3 HOH B 33 333 63 HOH HOH . 
L 3 HOH B 34 334 65 HOH HOH . 
L 3 HOH B 35 335 154 HOH HOH . 
L 3 HOH B 36 336 25 HOH HOH . 
L 3 HOH B 37 337 191 HOH HOH . 
L 3 HOH B 38 338 195 HOH HOH . 
L 3 HOH B 39 339 18 HOH HOH . 
L 3 HOH B 40 340 203 HOH HOH . 
L 3 HOH B 41 341 232 HOH HOH . 
L 3 HOH B 42 342 169 HOH HOH . 
L 3 HOH B 43 343 2 HOH HOH . 
L 3 HOH B 44 344 48 HOH HOH . 
L 3 HOH B 45 345 163 HOH HOH . 
L 3 HOH B 46 346 136 HOH HOH . 
L 3 HOH B 47 347 153 HOH HOH . 
L 3 HOH B 48 348 205 HOH HOH . 
L 3 HOH B 49 349 6 HOH HOH . 
L 3 HOH B 50 350 14 HOH HOH . 
L 3 HOH B 51 351 79 HOH HOH . 
L 3 HOH B 52 352 15 HOH HOH . 
L 3 HOH B 53 353 24 HOH HOH . 
L 3 HOH B 54 354 44 HOH HOH . 
L 3 HOH B 55 355 58 HOH HOH . 
L 3 HOH B 56 356 145 HOH HOH . 
L 3 HOH B 57 357 55 HOH HOH . 
L 3 HOH B 58 358 70 HOH HOH . 
L 3 HOH B 59 359 102 HOH HOH . 
L 3 HOH B 60 360 171 HOH HOH . 
L 3 HOH B 61 361 54 HOH HOH . 
L 3 HOH B 62 362 56 HOH HOH . 
L 3 HOH B 63 363 51 HOH HOH . 
L 3 HOH B 64 364 31 HOH HOH . 
L 3 HOH B 65 365 73 HOH HOH . 
L 3 HOH B 66 366 37 HOH HOH . 
L 3 HOH B 67 367 46 HOH HOH . 
L 3 HOH B 68 368 178 HOH HOH . 
L 3 HOH B 69 369 194 HOH HOH . 
L 3 HOH B 70 370 61 HOH HOH . 
L 3 HOH B 71 371 45 HOH HOH . 
L 3 HOH B 72 372 157 HOH HOH . 
L 3 HOH B 73 373 3 HOH HOH . 
L 3 HOH B 74 374 41 HOH HOH . 
L 3 HOH B 75 375 50 HOH HOH . 
L 3 HOH B 76 376 214 HOH HOH . 
L 3 HOH B 77 377 35 HOH HOH . 
L 3 HOH B 78 378 116 HOH HOH . 
L 3 HOH B 79 379 137 HOH HOH . 
L 3 HOH B 80 380 174 HOH HOH . 
L 3 HOH B 81 381 60 HOH HOH . 
L 3 HOH B 82 382 36 HOH HOH . 
L 3 HOH B 83 383 215 HOH HOH . 
L 3 HOH B 84 384 80 HOH HOH . 
L 3 HOH B 85 385 207 HOH HOH . 
L 3 HOH B 86 386 135 HOH HOH . 
L 3 HOH B 87 387 122 HOH HOH . 
L 3 HOH B 88 388 176 HOH HOH . 
L 3 HOH B 89 389 39 HOH HOH . 
L 3 HOH B 90 390 193 HOH HOH . 
L 3 HOH B 91 391 164 HOH HOH . 
L 3 HOH B 92 392 19 HOH HOH . 
L 3 HOH B 93 393 139 HOH HOH . 
L 3 HOH B 94 394 94 HOH HOH . 
L 3 HOH B 95 395 26 HOH HOH . 
L 3 HOH B 96 396 211 HOH HOH . 
L 3 HOH B 97 397 181 HOH HOH . 
L 3 HOH B 98 398 187 HOH HOH . 
L 3 HOH B 99 399 184 HOH HOH . 
L 3 HOH B 100 400 128 HOH HOH . 
L 3 HOH B 101 401 140 HOH HOH . 
L 3 HOH B 102 402 196 HOH HOH . 
L 3 HOH B 103 403 231 HOH HOH . 
L 3 HOH B 104 404 86 HOH HOH . 
L 3 HOH B 105 405 182 HOH HOH . 
L 3 HOH B 106 406 134 HOH HOH . 
L 3 HOH B 107 407 87 HOH HOH . 
L 3 HOH B 108 408 162 HOH HOH . 
L 3 HOH B 109 409 131 HOH HOH . 
L 3 HOH B 110 410 229 HOH HOH . 
L 3 HOH B 111 411 148 HOH HOH . 
L 3 HOH B 112 412 192 HOH HOH . 
L 3 HOH B 113 413 223 HOH HOH . 
L 3 HOH B 114 414 156 HOH HOH . 
L 3 HOH B 115 415 147 HOH HOH . 
L 3 HOH B 116 416 23 HOH HOH . 
L 3 HOH B 117 417 179 HOH HOH . 
L 3 HOH B 118 418 75 HOH HOH . 
L 3 HOH B 119 419 225 HOH HOH . 
L 3 HOH B 120 420 219 HOH HOH . 
L 3 HOH B 121 421 108 HOH HOH . 
L 3 HOH B 122 422 197 HOH HOH . 
L 3 HOH B 123 423 149 HOH HOH . 
L 3 HOH B 124 424 189 HOH HOH . 
L 3 HOH B 125 425 226 HOH HOH . 
L 3 HOH B 126 426 220 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 2 20.041 29.099 12.818 1 48.4 ? C1 GOL 202 B 1 
HETATM 2 O O1 GOL . . . H 2 21.03 29.028 13.828 1 54.7 ? O1 GOL 202 B 1 
HETATM 3 C C2 GOL . . . H 2 18.65 29.291 13.426 1 38.51 ? C2 GOL 202 B 1 
HETATM 4 O O2 GOL . . . H 2 18.022 30.46 12.932 1 29.59 ? O2 GOL 202 B 1 
HETATM 5 C C3 GOL . . . H 2 17.747 28.165 12.962 1 32.29 ? C3 GOL 202 B 1 
HETATM 6 O O3 GOL . . . H 2 16.457 28.508 13.415 1 36.77 ? O3 GOL 202 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#