data_5CQ2 # _model_server_result.job_id rbv0wbkwK2GRt0QioN-1GQ _model_server_result.datetime_utc '2024-12-22 11:31:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cq2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":610}' # _entry.id 5CQ2 # _exptl.entry_id 5CQ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight ? _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'UNKNOWN ATOM OR ION' _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CQ2 _cell.length_a 57.277 _cell.length_b 62.26 _cell.length_c 67.815 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CQ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 62.26 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 62.26 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 8 B CYS 333 1_555 C SG CYS 8 C CYS 333 2_565 ? A ? ? A ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 8 B CYS 333 1_555 C SG CYS 8 C CYS 333 2_565 ? B ? ? B ? ? ? ? ? ? ? 1.995 ? covale ? covale1 B C ACE 1 B ACE 326 1_555 B N THR 2 B THR 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale2 B C ILE 13 B ILE 338 1_555 B N NH2 14 B NH2 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 C C ILE 13 C ILE 338 1_555 C N NH2 14 C NH2 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? # _chem_comp.formula ? _chem_comp.formula_weight ? _chem_comp.id UNX _chem_comp.mon_nstd_flag . _chem_comp.name 'UNKNOWN ATOM OR ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5CQ2 _atom_sites.fract_transf_matrix[1][1] 0.017459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016062 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014746 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 UNX A 1 601 1 UNX UNX . E 3 UNX A 1 602 2 UNX UNX . F 3 UNX A 1 603 4 UNX UNX . G 3 UNX A 1 604 5 UNX UNX . H 3 UNX A 1 605 7 UNX UNX . I 3 UNX A 1 606 8 UNX UNX . J 3 UNX A 1 607 10 UNX UNX . K 3 UNX A 1 608 11 UNX UNX . L 3 UNX A 1 609 12 UNX UNX . M 3 UNX A 1 610 13 UNX UNX . N 3 UNX A 1 611 14 UNX UNX . O 3 UNX A 1 612 15 UNX UNX . P 3 UNX A 1 613 16 UNX UNX . Q 3 UNX A 1 614 17 UNX UNX . R 3 UNX A 1 615 18 UNX UNX . S 3 UNX B 1 401 9 UNX UNX . T 3 UNX C 1 401 3 UNX UNX . U 3 UNX C 1 402 6 UNX UNX . V 4 HOH A 1 701 66 HOH HOH . V 4 HOH A 2 702 43 HOH HOH . V 4 HOH A 3 703 27 HOH HOH . V 4 HOH A 4 704 35 HOH HOH . V 4 HOH A 5 705 59 HOH HOH . V 4 HOH A 6 706 67 HOH HOH . V 4 HOH A 7 707 44 HOH HOH . V 4 HOH A 8 708 49 HOH HOH . V 4 HOH A 9 709 9 HOH HOH . V 4 HOH A 10 710 6 HOH HOH . V 4 HOH A 11 711 22 HOH HOH . V 4 HOH A 12 712 7 HOH HOH . V 4 HOH A 13 713 24 HOH HOH . V 4 HOH A 14 714 36 HOH HOH . V 4 HOH A 15 715 74 HOH HOH . V 4 HOH A 16 716 20 HOH HOH . V 4 HOH A 17 717 47 HOH HOH . V 4 HOH A 18 718 8 HOH HOH . V 4 HOH A 19 719 21 HOH HOH . V 4 HOH A 20 720 69 HOH HOH . V 4 HOH A 21 721 2 HOH HOH . V 4 HOH A 22 722 13 HOH HOH . V 4 HOH A 23 723 17 HOH HOH . V 4 HOH A 24 724 48 HOH HOH . V 4 HOH A 25 725 15 HOH HOH . V 4 HOH A 26 726 60 HOH HOH . V 4 HOH A 27 727 3 HOH HOH . V 4 HOH A 28 728 14 HOH HOH . V 4 HOH A 29 729 12 HOH HOH . V 4 HOH A 30 730 64 HOH HOH . V 4 HOH A 31 731 11 HOH HOH . V 4 HOH A 32 732 68 HOH HOH . V 4 HOH A 33 733 52 HOH HOH . V 4 HOH A 34 734 30 HOH HOH . V 4 HOH A 35 735 46 HOH HOH . V 4 HOH A 36 736 58 HOH HOH . V 4 HOH A 37 737 4 HOH HOH . V 4 HOH A 38 738 81 HOH HOH . V 4 HOH A 39 739 63 HOH HOH . V 4 HOH A 40 740 40 HOH HOH . V 4 HOH A 41 741 76 HOH HOH . V 4 HOH A 42 742 33 HOH HOH . V 4 HOH A 43 743 80 HOH HOH . V 4 HOH A 44 744 75 HOH HOH . W 4 HOH B 1 501 10 HOH HOH . W 4 HOH B 2 502 53 HOH HOH . W 4 HOH B 3 503 72 HOH HOH . W 4 HOH B 4 504 39 HOH HOH . W 4 HOH B 5 505 19 HOH HOH . W 4 HOH B 6 506 23 HOH HOH . W 4 HOH B 7 507 54 HOH HOH . W 4 HOH B 8 508 71 HOH HOH . X 4 HOH C 1 501 26 HOH HOH . X 4 HOH C 2 502 77 HOH HOH . X 4 HOH C 3 503 28 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol X _atom_site.label_atom_id UNK _atom_site.label_comp_id UNX _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 3 _atom_site.Cartn_x -17.13 _atom_site.Cartn_y 48.555 _atom_site.Cartn_z 14.34 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id UNK _atom_site.auth_comp_id UNX _atom_site.auth_seq_id 610 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #