data_5CQB # _model_server_result.job_id Ee5zBiW35RSmSXzoDPECDw _model_server_result.datetime_utc '2024-12-03 13:22:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cqb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5CQB # _exptl.entry_id 5CQB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CQB _cell.length_a 62.981 _cell.length_b 68.229 _cell.length_c 111.412 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CQB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 237 n n C1 C2 PGE sing 238 n n C1 H1 PGE sing 239 n n C1 H12 PGE sing 240 n n O1 HO1 PGE sing 241 n n C2 O2 PGE sing 242 n n C2 H2 PGE sing 243 n n C2 H22 PGE sing 244 n n O2 C3 PGE sing 245 n n C3 C4 PGE sing 246 n n C3 H3 PGE sing 247 n n C3 H32 PGE sing 248 n n C4 O3 PGE sing 249 n n C4 H4 PGE sing 250 n n C4 H42 PGE sing 251 n n O4 C6 PGE sing 252 n n O4 HO4 PGE sing 253 n n C6 C5 PGE sing 254 n n C6 H6 PGE sing 255 n n C6 H62 PGE sing 256 n n C5 O3 PGE sing 257 n n C5 H5 PGE sing 258 n n C5 H52 PGE sing 259 n n # _atom_sites.entry_id 5CQB _atom_sites.fract_transf_matrix[1][1] 0.015878 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014657 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008976 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 301 1 PGE PGE . D 3 HOH A 1 401 74 HOH HOH . D 3 HOH A 2 402 34 HOH HOH . D 3 HOH A 3 403 70 HOH HOH . D 3 HOH A 4 404 80 HOH HOH . D 3 HOH A 5 405 76 HOH HOH . D 3 HOH A 6 406 63 HOH HOH . D 3 HOH A 7 407 75 HOH HOH . D 3 HOH A 8 408 8 HOH HOH . D 3 HOH A 9 409 21 HOH HOH . D 3 HOH A 10 410 27 HOH HOH . D 3 HOH A 11 411 67 HOH HOH . D 3 HOH A 12 412 6 HOH HOH . D 3 HOH A 13 413 18 HOH HOH . D 3 HOH A 14 414 47 HOH HOH . D 3 HOH A 15 415 51 HOH HOH . D 3 HOH A 16 416 71 HOH HOH . D 3 HOH A 17 417 72 HOH HOH . D 3 HOH A 18 418 26 HOH HOH . D 3 HOH A 19 419 49 HOH HOH . D 3 HOH A 20 420 62 HOH HOH . D 3 HOH A 21 421 5 HOH HOH . D 3 HOH A 22 422 29 HOH HOH . D 3 HOH A 23 423 19 HOH HOH . D 3 HOH A 24 424 37 HOH HOH . D 3 HOH A 25 425 30 HOH HOH . D 3 HOH A 26 426 7 HOH HOH . D 3 HOH A 27 427 36 HOH HOH . D 3 HOH A 28 428 44 HOH HOH . D 3 HOH A 29 429 17 HOH HOH . D 3 HOH A 30 430 53 HOH HOH . D 3 HOH A 31 431 50 HOH HOH . D 3 HOH A 32 432 43 HOH HOH . D 3 HOH A 33 433 56 HOH HOH . D 3 HOH A 34 434 77 HOH HOH . D 3 HOH A 35 435 59 HOH HOH . D 3 HOH A 36 436 42 HOH HOH . D 3 HOH A 37 437 28 HOH HOH . D 3 HOH A 38 438 55 HOH HOH . E 3 HOH B 1 301 12 HOH HOH . E 3 HOH B 2 302 20 HOH HOH . E 3 HOH B 3 303 60 HOH HOH . E 3 HOH B 4 304 31 HOH HOH . E 3 HOH B 5 305 46 HOH HOH . E 3 HOH B 6 306 57 HOH HOH . E 3 HOH B 7 307 2 HOH HOH . E 3 HOH B 8 308 10 HOH HOH . E 3 HOH B 9 309 61 HOH HOH . E 3 HOH B 10 310 35 HOH HOH . E 3 HOH B 11 311 39 HOH HOH . E 3 HOH B 12 312 9 HOH HOH . E 3 HOH B 13 313 68 HOH HOH . E 3 HOH B 14 314 13 HOH HOH . E 3 HOH B 15 315 24 HOH HOH . E 3 HOH B 16 316 33 HOH HOH . E 3 HOH B 17 317 11 HOH HOH . E 3 HOH B 18 318 16 HOH HOH . E 3 HOH B 19 319 45 HOH HOH . E 3 HOH B 20 320 38 HOH HOH . E 3 HOH B 21 321 25 HOH HOH . E 3 HOH B 22 322 54 HOH HOH . E 3 HOH B 23 323 23 HOH HOH . E 3 HOH B 24 324 1 HOH HOH . E 3 HOH B 25 325 22 HOH HOH . E 3 HOH B 26 326 79 HOH HOH . E 3 HOH B 27 327 4 HOH HOH . E 3 HOH B 28 328 78 HOH HOH . E 3 HOH B 29 329 41 HOH HOH . E 3 HOH B 30 330 14 HOH HOH . E 3 HOH B 31 331 52 HOH HOH . E 3 HOH B 32 332 65 HOH HOH . E 3 HOH B 33 333 73 HOH HOH . E 3 HOH B 34 334 69 HOH HOH . E 3 HOH B 35 335 32 HOH HOH . E 3 HOH B 36 336 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . C 2 49.411 66.333 96.193 1 58.29 ? C1 PGE 301 A 1 HETATM 2 O O1 PGE . . . C 2 50.556 65.545 96.516 1 56.14 ? O1 PGE 301 A 1 HETATM 3 C C2 PGE . . . C 2 49.331 67.594 97.043 1 60.75 ? C2 PGE 301 A 1 HETATM 4 O O2 PGE . . . C 2 50.332 68.527 96.664 1 62.21 ? O2 PGE 301 A 1 HETATM 5 C C3 PGE . . . C 2 50.094 69.859 97.094 1 60.59 ? C3 PGE 301 A 1 HETATM 6 C C4 PGE . . . C 2 51.245 70.362 97.955 1 60.13 ? C4 PGE 301 A 1 HETATM 7 O O4 PGE . . . C 2 55.4 70.065 97.272 1 52.62 ? O4 PGE 301 A 1 HETATM 8 C C6 PGE . . . C 2 54.484 70.419 98.297 1 54.61 ? C6 PGE 301 A 1 HETATM 9 C C5 PGE . . . C 2 53.402 71.366 97.806 1 58.05 ? C5 PGE 301 A 1 HETATM 10 O O3 PGE . . . C 2 52.373 70.645 97.15 1 60.02 ? O3 PGE 301 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #