data_5CQE # _model_server_result.job_id gIeXWMwqtZVeuknVlVyoIw _model_server_result.datetime_utc '2024-10-19 15:25:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cqe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 5CQE # _exptl.entry_id 5CQE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CQE _cell.length_a 78.367 _cell.length_b 117.896 _cell.length_c 40.256 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CQE _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 359 n n C C2 TRS sing 360 n n C C3 TRS sing 361 n n C N TRS sing 362 n n C1 O1 TRS sing 363 n n C1 H11 TRS sing 364 n n C1 H12 TRS sing 365 n n C2 O2 TRS sing 366 n n C2 H21 TRS sing 367 n n C2 H22 TRS sing 368 n n C3 O3 TRS sing 369 n n C3 H31 TRS sing 370 n n C3 H32 TRS sing 371 n n N HN1 TRS sing 372 n n N HN2 TRS sing 373 n n N HN3 TRS sing 374 n n O1 HO1 TRS sing 375 n n O2 HO2 TRS sing 376 n n O3 HO3 TRS sing 377 n n # _atom_sites.entry_id 5CQE _atom_sites.fract_transf_matrix[1][1] 0.01276 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008482 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024841 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 201 1 CL CL . D 2 CL A 1 202 2 CL CL . E 3 TRS A 1 203 4 TRS TRS . F 4 EDO A 1 204 6 EDO EDO . G 2 CL B 1 201 3 CL CL . H 5 PEG B 1 202 5 PEG PEG . I 6 HOH A 1 301 26 HOH HOH . I 6 HOH A 2 302 89 HOH HOH . I 6 HOH A 3 303 45 HOH HOH . I 6 HOH A 4 304 87 HOH HOH . I 6 HOH A 5 305 20 HOH HOH . I 6 HOH A 6 306 69 HOH HOH . I 6 HOH A 7 307 49 HOH HOH . I 6 HOH A 8 308 33 HOH HOH . I 6 HOH A 9 309 18 HOH HOH . I 6 HOH A 10 310 22 HOH HOH . I 6 HOH A 11 311 63 HOH HOH . I 6 HOH A 12 312 41 HOH HOH . I 6 HOH A 13 313 40 HOH HOH . I 6 HOH A 14 314 34 HOH HOH . I 6 HOH A 15 315 88 HOH HOH . I 6 HOH A 16 316 17 HOH HOH . I 6 HOH A 17 317 8 HOH HOH . I 6 HOH A 18 318 94 HOH HOH . I 6 HOH A 19 319 85 HOH HOH . I 6 HOH A 20 320 25 HOH HOH . I 6 HOH A 21 321 19 HOH HOH . I 6 HOH A 22 322 44 HOH HOH . I 6 HOH A 23 323 51 HOH HOH . I 6 HOH A 24 324 58 HOH HOH . I 6 HOH A 25 325 92 HOH HOH . I 6 HOH A 26 326 75 HOH HOH . I 6 HOH A 27 327 47 HOH HOH . I 6 HOH A 28 328 46 HOH HOH . I 6 HOH A 29 329 62 HOH HOH . I 6 HOH A 30 330 16 HOH HOH . I 6 HOH A 31 331 96 HOH HOH . I 6 HOH A 32 332 78 HOH HOH . I 6 HOH A 33 333 61 HOH HOH . I 6 HOH A 34 334 30 HOH HOH . I 6 HOH A 35 335 67 HOH HOH . I 6 HOH A 36 336 70 HOH HOH . I 6 HOH A 37 337 83 HOH HOH . I 6 HOH A 38 338 48 HOH HOH . I 6 HOH A 39 339 93 HOH HOH . J 6 HOH B 1 301 72 HOH HOH . J 6 HOH B 2 302 68 HOH HOH . J 6 HOH B 3 303 39 HOH HOH . J 6 HOH B 4 304 77 HOH HOH . J 6 HOH B 5 305 42 HOH HOH . J 6 HOH B 6 306 14 HOH HOH . J 6 HOH B 7 307 50 HOH HOH . J 6 HOH B 8 308 10 HOH HOH . J 6 HOH B 9 309 23 HOH HOH . J 6 HOH B 10 310 9 HOH HOH . J 6 HOH B 11 311 43 HOH HOH . J 6 HOH B 12 312 12 HOH HOH . J 6 HOH B 13 313 21 HOH HOH . J 6 HOH B 14 314 7 HOH HOH . J 6 HOH B 15 315 73 HOH HOH . J 6 HOH B 16 316 65 HOH HOH . J 6 HOH B 17 317 66 HOH HOH . J 6 HOH B 18 318 95 HOH HOH . J 6 HOH B 19 319 59 HOH HOH . J 6 HOH B 20 320 11 HOH HOH . J 6 HOH B 21 321 74 HOH HOH . J 6 HOH B 22 322 15 HOH HOH . J 6 HOH B 23 323 37 HOH HOH . J 6 HOH B 24 324 55 HOH HOH . J 6 HOH B 25 325 81 HOH HOH . J 6 HOH B 26 326 76 HOH HOH . J 6 HOH B 27 327 29 HOH HOH . J 6 HOH B 28 328 27 HOH HOH . J 6 HOH B 29 329 52 HOH HOH . J 6 HOH B 30 330 91 HOH HOH . J 6 HOH B 31 331 28 HOH HOH . J 6 HOH B 32 332 56 HOH HOH . J 6 HOH B 33 333 35 HOH HOH . J 6 HOH B 34 334 84 HOH HOH . J 6 HOH B 35 335 64 HOH HOH . J 6 HOH B 36 336 53 HOH HOH . J 6 HOH B 37 337 86 HOH HOH . J 6 HOH B 38 338 38 HOH HOH . J 6 HOH B 39 339 24 HOH HOH . J 6 HOH B 40 340 31 HOH HOH . J 6 HOH B 41 341 36 HOH HOH . J 6 HOH B 42 342 90 HOH HOH . J 6 HOH B 43 343 13 HOH HOH . J 6 HOH B 44 344 54 HOH HOH . J 6 HOH B 45 345 32 HOH HOH . J 6 HOH B 46 346 80 HOH HOH . J 6 HOH B 47 347 57 HOH HOH . J 6 HOH B 48 348 60 HOH HOH . J 6 HOH B 49 349 71 HOH HOH . J 6 HOH B 50 350 79 HOH HOH . J 6 HOH B 51 351 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . E 3 43.155 14.762 36.937 1 88.54 ? C TRS 203 A 1 HETATM 2 C C1 TRS . . . E 3 42.098 15.002 35.85 1 79.74 ? C1 TRS 203 A 1 HETATM 3 C C2 TRS . . . E 3 42.47 14.352 38.252 1 88.52 ? C2 TRS 203 A 1 HETATM 4 C C3 TRS . . . E 3 44.113 15.951 37.176 1 89.16 ? C3 TRS 203 A 1 HETATM 5 N N TRS . . . E 3 43.951 13.611 36.434 1 80.78 ? N TRS 203 A 1 HETATM 6 O O1 TRS . . . E 3 41.208 16.06 36.205 1 77.56 ? O1 TRS 203 A 1 HETATM 7 O O2 TRS . . . E 3 43.269 14.717 39.391 1 75.43 ? O2 TRS 203 A 1 HETATM 8 O O3 TRS . . . E 3 44.522 16.621 35.965 1 80 ? O3 TRS 203 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #