data_5CQI
#
_model_server_result.job_id            xSMVZzSLOOIOJN-iVqyyRQ 
_model_server_result.datetime_utc      '2024-11-22 15:46:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cqi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    5CQI 
#
_exptl.entry_id    5CQI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CQI 
_cell.length_a            51.02 
_cell.length_b            54.29 
_cell.length_c            65.41 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CQI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 60 A HIS 253 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc2 A SG CYS 91 A CYS 284 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc3 A SG CYS 96 A CYS 289 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc4 B ZN ZN . A ZN 401 1_555 F O HOH . A HOH 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5CQI 
_atom_sites.fract_transf_matrix[1][1]    0.0196 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01842 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015288 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 401 2 ZN ZN . 
C 3 GOL A 1 402 1 GOL GOL . 
D 3 GOL A 1 403 2 GOL GOL . 
E 3 GOL A 1 404 3 GOL GOL . 
F 4 HOH A 1 501 132 HOH HOH . 
F 4 HOH A 2 502 135 HOH HOH . 
F 4 HOH A 3 503 215 HOH HOH . 
F 4 HOH A 4 504 167 HOH HOH . 
F 4 HOH A 5 505 110 HOH HOH . 
F 4 HOH A 6 506 203 HOH HOH . 
F 4 HOH A 7 507 75 HOH HOH . 
F 4 HOH A 8 508 105 HOH HOH . 
F 4 HOH A 9 509 214 HOH HOH . 
F 4 HOH A 10 510 73 HOH HOH . 
F 4 HOH A 11 511 65 HOH HOH . 
F 4 HOH A 12 512 98 HOH HOH . 
F 4 HOH A 13 513 125 HOH HOH . 
F 4 HOH A 14 514 196 HOH HOH . 
F 4 HOH A 15 515 211 HOH HOH . 
F 4 HOH A 16 516 17 HOH HOH . 
F 4 HOH A 17 517 148 HOH HOH . 
F 4 HOH A 18 518 35 HOH HOH . 
F 4 HOH A 19 519 90 HOH HOH . 
F 4 HOH A 20 520 92 HOH HOH . 
F 4 HOH A 21 521 147 HOH HOH . 
F 4 HOH A 22 522 83 HOH HOH . 
F 4 HOH A 23 523 170 HOH HOH . 
F 4 HOH A 24 524 99 HOH HOH . 
F 4 HOH A 25 525 5 HOH HOH . 
F 4 HOH A 26 526 156 HOH HOH . 
F 4 HOH A 27 527 31 HOH HOH . 
F 4 HOH A 28 528 213 HOH HOH . 
F 4 HOH A 29 529 55 HOH HOH . 
F 4 HOH A 30 530 192 HOH HOH . 
F 4 HOH A 31 531 81 HOH HOH . 
F 4 HOH A 32 532 24 HOH HOH . 
F 4 HOH A 33 533 120 HOH HOH . 
F 4 HOH A 34 534 41 HOH HOH . 
F 4 HOH A 35 535 89 HOH HOH . 
F 4 HOH A 36 536 113 HOH HOH . 
F 4 HOH A 37 537 53 HOH HOH . 
F 4 HOH A 38 538 151 HOH HOH . 
F 4 HOH A 39 539 68 HOH HOH . 
F 4 HOH A 40 540 23 HOH HOH . 
F 4 HOH A 41 541 40 HOH HOH . 
F 4 HOH A 42 542 77 HOH HOH . 
F 4 HOH A 43 543 97 HOH HOH . 
F 4 HOH A 44 544 69 HOH HOH . 
F 4 HOH A 45 545 46 HOH HOH . 
F 4 HOH A 46 546 96 HOH HOH . 
F 4 HOH A 47 547 47 HOH HOH . 
F 4 HOH A 48 548 9 HOH HOH . 
F 4 HOH A 49 549 59 HOH HOH . 
F 4 HOH A 50 550 76 HOH HOH . 
F 4 HOH A 51 551 79 HOH HOH . 
F 4 HOH A 52 552 18 HOH HOH . 
F 4 HOH A 53 553 93 HOH HOH . 
F 4 HOH A 54 554 142 HOH HOH . 
F 4 HOH A 55 555 186 HOH HOH . 
F 4 HOH A 56 556 108 HOH HOH . 
F 4 HOH A 57 557 86 HOH HOH . 
F 4 HOH A 58 558 70 HOH HOH . 
F 4 HOH A 59 559 126 HOH HOH . 
F 4 HOH A 60 560 10 HOH HOH . 
F 4 HOH A 61 561 173 HOH HOH . 
F 4 HOH A 62 562 15 HOH HOH . 
F 4 HOH A 63 563 212 HOH HOH . 
F 4 HOH A 64 564 58 HOH HOH . 
F 4 HOH A 65 565 54 HOH HOH . 
F 4 HOH A 66 566 177 HOH HOH . 
F 4 HOH A 67 567 91 HOH HOH . 
F 4 HOH A 68 568 143 HOH HOH . 
F 4 HOH A 69 569 29 HOH HOH . 
F 4 HOH A 70 570 94 HOH HOH . 
F 4 HOH A 71 571 11 HOH HOH . 
F 4 HOH A 72 572 104 HOH HOH . 
F 4 HOH A 73 573 61 HOH HOH . 
F 4 HOH A 74 574 144 HOH HOH . 
F 4 HOH A 75 575 216 HOH HOH . 
F 4 HOH A 76 576 25 HOH HOH . 
F 4 HOH A 77 577 102 HOH HOH . 
F 4 HOH A 78 578 34 HOH HOH . 
F 4 HOH A 79 579 50 HOH HOH . 
F 4 HOH A 80 580 175 HOH HOH . 
F 4 HOH A 81 581 51 HOH HOH . 
F 4 HOH A 82 582 36 HOH HOH . 
F 4 HOH A 83 583 19 HOH HOH . 
F 4 HOH A 84 584 20 HOH HOH . 
F 4 HOH A 85 585 217 HOH HOH . 
F 4 HOH A 86 586 28 HOH HOH . 
F 4 HOH A 87 587 3 HOH HOH . 
F 4 HOH A 88 588 8 HOH HOH . 
F 4 HOH A 89 589 52 HOH HOH . 
F 4 HOH A 90 590 2 HOH HOH . 
F 4 HOH A 91 591 72 HOH HOH . 
F 4 HOH A 92 592 67 HOH HOH . 
F 4 HOH A 93 593 60 HOH HOH . 
F 4 HOH A 94 594 176 HOH HOH . 
F 4 HOH A 95 595 109 HOH HOH . 
F 4 HOH A 96 596 26 HOH HOH . 
F 4 HOH A 97 597 27 HOH HOH . 
F 4 HOH A 98 598 152 HOH HOH . 
F 4 HOH A 99 599 171 HOH HOH . 
F 4 HOH A 100 600 168 HOH HOH . 
F 4 HOH A 101 601 187 HOH HOH . 
F 4 HOH A 102 602 103 HOH HOH . 
F 4 HOH A 103 603 101 HOH HOH . 
F 4 HOH A 104 604 14 HOH HOH . 
F 4 HOH A 105 605 16 HOH HOH . 
F 4 HOH A 106 606 7 HOH HOH . 
F 4 HOH A 107 607 174 HOH HOH . 
F 4 HOH A 108 608 165 HOH HOH . 
F 4 HOH A 109 609 39 HOH HOH . 
F 4 HOH A 110 610 63 HOH HOH . 
F 4 HOH A 111 611 4 HOH HOH . 
F 4 HOH A 112 612 42 HOH HOH . 
F 4 HOH A 113 613 6 HOH HOH . 
F 4 HOH A 114 614 38 HOH HOH . 
F 4 HOH A 115 615 48 HOH HOH . 
F 4 HOH A 116 616 131 HOH HOH . 
F 4 HOH A 117 617 87 HOH HOH . 
F 4 HOH A 118 618 134 HOH HOH . 
F 4 HOH A 119 619 30 HOH HOH . 
F 4 HOH A 120 620 1 HOH HOH . 
F 4 HOH A 121 621 56 HOH HOH . 
F 4 HOH A 122 622 106 HOH HOH . 
F 4 HOH A 123 623 95 HOH HOH . 
F 4 HOH A 124 624 32 HOH HOH . 
F 4 HOH A 125 625 145 HOH HOH . 
F 4 HOH A 126 626 85 HOH HOH . 
F 4 HOH A 127 627 118 HOH HOH . 
F 4 HOH A 128 628 141 HOH HOH . 
F 4 HOH A 129 629 129 HOH HOH . 
F 4 HOH A 130 630 64 HOH HOH . 
F 4 HOH A 131 631 100 HOH HOH . 
F 4 HOH A 132 632 12 HOH HOH . 
F 4 HOH A 133 633 84 HOH HOH . 
F 4 HOH A 134 634 21 HOH HOH . 
F 4 HOH A 135 635 13 HOH HOH . 
F 4 HOH A 136 636 78 HOH HOH . 
F 4 HOH A 137 637 124 HOH HOH . 
F 4 HOH A 138 638 210 HOH HOH . 
F 4 HOH A 139 639 182 HOH HOH . 
F 4 HOH A 140 640 82 HOH HOH . 
F 4 HOH A 141 641 140 HOH HOH . 
F 4 HOH A 142 642 49 HOH HOH . 
F 4 HOH A 143 643 154 HOH HOH . 
F 4 HOH A 144 644 208 HOH HOH . 
F 4 HOH A 145 645 33 HOH HOH . 
F 4 HOH A 146 646 22 HOH HOH . 
F 4 HOH A 147 647 88 HOH HOH . 
F 4 HOH A 148 648 160 HOH HOH . 
F 4 HOH A 149 649 138 HOH HOH . 
F 4 HOH A 150 650 155 HOH HOH . 
F 4 HOH A 151 651 114 HOH HOH . 
F 4 HOH A 152 652 80 HOH HOH . 
F 4 HOH A 153 653 112 HOH HOH . 
F 4 HOH A 154 654 44 HOH HOH . 
F 4 HOH A 155 655 117 HOH HOH . 
F 4 HOH A 156 656 195 HOH HOH . 
F 4 HOH A 157 657 62 HOH HOH . 
F 4 HOH A 158 658 158 HOH HOH . 
F 4 HOH A 159 659 153 HOH HOH . 
F 4 HOH A 160 660 149 HOH HOH . 
F 4 HOH A 161 661 179 HOH HOH . 
F 4 HOH A 162 662 123 HOH HOH . 
F 4 HOH A 163 663 107 HOH HOH . 
F 4 HOH A 164 664 162 HOH HOH . 
F 4 HOH A 165 665 137 HOH HOH . 
F 4 HOH A 166 666 178 HOH HOH . 
F 4 HOH A 167 667 193 HOH HOH . 
F 4 HOH A 168 668 207 HOH HOH . 
F 4 HOH A 169 669 199 HOH HOH . 
F 4 HOH A 170 670 185 HOH HOH . 
F 4 HOH A 171 671 204 HOH HOH . 
F 4 HOH A 172 672 128 HOH HOH . 
F 4 HOH A 173 673 111 HOH HOH . 
F 4 HOH A 174 674 200 HOH HOH . 
F 4 HOH A 175 675 164 HOH HOH . 
F 4 HOH A 176 676 115 HOH HOH . 
F 4 HOH A 177 677 157 HOH HOH . 
F 4 HOH A 178 678 191 HOH HOH . 
F 4 HOH A 179 679 189 HOH HOH . 
F 4 HOH A 180 680 122 HOH HOH . 
F 4 HOH A 181 681 136 HOH HOH . 
F 4 HOH A 182 682 169 HOH HOH . 
F 4 HOH A 183 683 180 HOH HOH . 
F 4 HOH A 184 684 184 HOH HOH . 
F 4 HOH A 185 685 183 HOH HOH . 
F 4 HOH A 186 686 119 HOH HOH . 
F 4 HOH A 187 687 121 HOH HOH . 
F 4 HOH A 188 688 139 HOH HOH . 
F 4 HOH A 189 689 201 HOH HOH . 
F 4 HOH A 190 690 163 HOH HOH . 
F 4 HOH A 191 691 194 HOH HOH . 
F 4 HOH A 192 692 146 HOH HOH . 
F 4 HOH A 193 693 159 HOH HOH . 
F 4 HOH A 194 694 74 HOH HOH . 
F 4 HOH A 195 695 37 HOH HOH . 
F 4 HOH A 196 696 190 HOH HOH . 
F 4 HOH A 197 697 130 HOH HOH . 
F 4 HOH A 198 698 209 HOH HOH . 
F 4 HOH A 199 699 71 HOH HOH . 
F 4 HOH A 200 700 188 HOH HOH . 
F 4 HOH A 201 701 150 HOH HOH . 
F 4 HOH A 202 702 202 HOH HOH . 
F 4 HOH A 203 703 133 HOH HOH . 
F 4 HOH A 204 704 197 HOH HOH . 
F 4 HOH A 205 705 57 HOH HOH . 
F 4 HOH A 206 706 45 HOH HOH . 
F 4 HOH A 207 707 127 HOH HOH . 
F 4 HOH A 208 708 161 HOH HOH . 
F 4 HOH A 209 709 172 HOH HOH . 
F 4 HOH A 210 710 206 HOH HOH . 
F 4 HOH A 211 711 205 HOH HOH . 
F 4 HOH A 212 712 116 HOH HOH . 
F 4 HOH A 213 713 166 HOH HOH . 
F 4 HOH A 214 714 198 HOH HOH . 
F 4 HOH A 215 715 181 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 -2.497 -24.909 15.495 1 43.91 ? C1 GOL 404 A 1 
HETATM 2 O O1 GOL . . . E 3 -3.258 -26.084 15.663 1 42.9 ? O1 GOL 404 A 1 
HETATM 3 C C2 GOL . . . E 3 -3.321 -23.721 15.973 1 44.45 ? C2 GOL 404 A 1 
HETATM 4 O O2 GOL . . . E 3 -2.983 -23.407 17.307 1 45.37 ? O2 GOL 404 A 1 
HETATM 5 C C3 GOL . . . E 3 -3.136 -22.487 15.091 1 42.05 ? C3 GOL 404 A 1 
HETATM 6 O O3 GOL . . . E 3 -4.397 -21.931 14.779 1 39.48 ? O3 GOL 404 A 1 
HETATM 7 H H11 GOL . . . E 3 -2.237 -24.782 14.444 1 52.69 ? H11 GOL 404 A 1 
HETATM 8 H H12 GOL . . . E 3 -1.574 -24.978 16.071 1 52.69 ? H12 GOL 404 A 1 
HETATM 9 H HO1 GOL . . . E 3 -2.764 -26.848 15.298 1 51.48 ? HO1 GOL 404 A 1 
HETATM 10 H H2 GOL . . . E 3 -4.372 -24.006 15.932 1 53.34 ? H2 GOL 404 A 1 
HETATM 11 H HO2 GOL . . . E 3 -2.051 -23.104 17.346 1 54.44 ? HO2 GOL 404 A 1 
HETATM 12 H H31 GOL . . . E 3 -2.619 -22.765 14.173 1 50.46 ? H31 GOL 404 A 1 
HETATM 13 H H32 GOL . . . E 3 -2.528 -21.749 15.614 1 50.46 ? H32 GOL 404 A 1 
HETATM 14 H HO3 GOL . . . E 3 -4.36 -20.958 14.883 1 47.38 ? HO3 GOL 404 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#