data_5CQJ
#
_model_server_result.job_id            5-m1cyCm83DeoHKqLF5nGg 
_model_server_result.datetime_utc      '2025-03-02 06:37:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cqj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    5CQJ 
#
_exptl.entry_id    5CQJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              405.96 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Clomifene 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CQJ 
_cell.length_a            63.312 
_cell.length_b            68.488 
_cell.length_c            111.63 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CQJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C26 H28 Cl N O' 
_chem_comp.formula_weight    405.96 
_chem_comp.id                53Q 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Clomifene 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-[(E)-2-chloro-1,2-diphenylethenyl]-4-methoxybenzene;clomiphene 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C5 O 53Q sing 1 n n 
O C6 53Q sing 2 n n 
C6 C11 53Q doub 3 n y 
C6 C7 53Q sing 4 n y 
C11 C10 53Q sing 5 n y 
C7 C8 53Q doub 6 n y 
C10 C9 53Q doub 7 n y 
C8 C9 53Q sing 8 n y 
C24 C25 53Q doub 9 n y 
C24 C23 53Q sing 10 n y 
C25 C20 53Q sing 11 n y 
C9 C12 53Q sing 12 n n 
C23 C22 53Q doub 13 n y 
C20 C12 53Q sing 14 n n 
C20 C21 53Q doub 15 n y 
C12 C13 53Q doub 16 e n 
C22 C21 53Q sing 17 n y 
C13 C14 53Q sing 18 n n 
C13 CL 53Q sing 19 n n 
C15 C14 53Q doub 20 n y 
C15 C16 53Q sing 21 n y 
C14 C19 53Q sing 22 n y 
C16 C17 53Q doub 23 n y 
C19 C18 53Q doub 24 n y 
C17 C18 53Q sing 25 n y 
C5 H1 53Q sing 26 n n 
C5 H2 53Q sing 27 n n 
C7 H4 53Q sing 28 n n 
C8 H5 53Q sing 29 n n 
C10 H6 53Q sing 30 n n 
C11 H7 53Q sing 31 n n 
C15 H8 53Q sing 32 n n 
C19 H9 53Q sing 33 n n 
C18 H10 53Q sing 34 n n 
C17 H11 53Q sing 35 n n 
C16 H12 53Q sing 36 n n 
C25 H13 53Q sing 37 n n 
C24 H14 53Q sing 38 n n 
C23 H15 53Q sing 39 n n 
C22 H16 53Q sing 40 n n 
C21 H17 53Q sing 41 n n 
C5 C4 53Q sing 42 n n 
C4 N1 53Q sing 43 n n 
N1 C3 53Q sing 44 n n 
C3 C2 53Q sing 45 n n 
N1 C26 53Q sing 46 n n 
C26 C27 53Q sing 47 n n 
C4 H3 53Q sing 48 n n 
C4 H18 53Q sing 49 n n 
C3 H19 53Q sing 50 n n 
C3 H20 53Q sing 51 n n 
C2 H21 53Q sing 52 n n 
C2 H22 53Q sing 53 n n 
C2 H23 53Q sing 54 n n 
C26 H24 53Q sing 55 n n 
C26 H25 53Q sing 56 n n 
C27 H26 53Q sing 57 n n 
C27 H27 53Q sing 58 n n 
C27 H28 53Q sing 59 n n 
#
_atom_sites.entry_id                     5CQJ 
_atom_sites.fract_transf_matrix[1][1]    0.015795 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014601 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008958 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 53Q A 1 301 1 53Q XXX . 
D 3 HOH A 1 401 63 HOH HOH . 
D 3 HOH A 2 402 91 HOH HOH . 
D 3 HOH A 3 403 32 HOH HOH . 
D 3 HOH A 4 404 66 HOH HOH . 
D 3 HOH A 5 405 27 HOH HOH . 
D 3 HOH A 6 406 2 HOH HOH . 
D 3 HOH A 7 407 20 HOH HOH . 
D 3 HOH A 8 408 57 HOH HOH . 
D 3 HOH A 9 409 41 HOH HOH . 
D 3 HOH A 10 410 88 HOH HOH . 
D 3 HOH A 11 411 7 HOH HOH . 
D 3 HOH A 12 412 39 HOH HOH . 
D 3 HOH A 13 413 9 HOH HOH . 
D 3 HOH A 14 414 55 HOH HOH . 
D 3 HOH A 15 415 34 HOH HOH . 
D 3 HOH A 16 416 15 HOH HOH . 
D 3 HOH A 17 417 71 HOH HOH . 
D 3 HOH A 18 418 67 HOH HOH . 
D 3 HOH A 19 419 33 HOH HOH . 
D 3 HOH A 20 420 47 HOH HOH . 
D 3 HOH A 21 421 29 HOH HOH . 
D 3 HOH A 22 422 60 HOH HOH . 
D 3 HOH A 23 423 98 HOH HOH . 
D 3 HOH A 24 424 17 HOH HOH . 
D 3 HOH A 25 425 84 HOH HOH . 
D 3 HOH A 26 426 11 HOH HOH . 
D 3 HOH A 27 427 8 HOH HOH . 
D 3 HOH A 28 428 51 HOH HOH . 
D 3 HOH A 29 429 5 HOH HOH . 
D 3 HOH A 30 430 25 HOH HOH . 
D 3 HOH A 31 431 74 HOH HOH . 
D 3 HOH A 32 432 56 HOH HOH . 
D 3 HOH A 33 433 86 HOH HOH . 
D 3 HOH A 34 434 21 HOH HOH . 
D 3 HOH A 35 435 40 HOH HOH . 
D 3 HOH A 36 436 73 HOH HOH . 
D 3 HOH A 37 437 58 HOH HOH . 
D 3 HOH A 38 438 69 HOH HOH . 
D 3 HOH A 39 439 46 HOH HOH . 
D 3 HOH A 40 440 45 HOH HOH . 
D 3 HOH A 41 441 38 HOH HOH . 
D 3 HOH A 42 442 90 HOH HOH . 
D 3 HOH A 43 443 85 HOH HOH . 
D 3 HOH A 44 444 72 HOH HOH . 
D 3 HOH A 45 445 13 HOH HOH . 
D 3 HOH A 46 446 35 HOH HOH . 
D 3 HOH A 47 447 100 HOH HOH . 
D 3 HOH A 48 448 16 HOH HOH . 
D 3 HOH A 49 449 53 HOH HOH . 
D 3 HOH A 50 450 97 HOH HOH . 
D 3 HOH A 51 451 99 HOH HOH . 
D 3 HOH A 52 452 95 HOH HOH . 
D 3 HOH A 53 453 101 HOH HOH . 
D 3 HOH A 54 454 44 HOH HOH . 
D 3 HOH A 55 455 70 HOH HOH . 
D 3 HOH A 56 456 89 HOH HOH . 
D 3 HOH A 57 457 77 HOH HOH . 
E 3 HOH B 1 301 68 HOH HOH . 
E 3 HOH B 2 302 64 HOH HOH . 
E 3 HOH B 3 303 23 HOH HOH . 
E 3 HOH B 4 304 50 HOH HOH . 
E 3 HOH B 5 305 28 HOH HOH . 
E 3 HOH B 6 306 59 HOH HOH . 
E 3 HOH B 7 307 1 HOH HOH . 
E 3 HOH B 8 308 61 HOH HOH . 
E 3 HOH B 9 309 93 HOH HOH . 
E 3 HOH B 10 310 10 HOH HOH . 
E 3 HOH B 11 311 12 HOH HOH . 
E 3 HOH B 12 312 83 HOH HOH . 
E 3 HOH B 13 313 18 HOH HOH . 
E 3 HOH B 14 314 48 HOH HOH . 
E 3 HOH B 15 315 43 HOH HOH . 
E 3 HOH B 16 316 4 HOH HOH . 
E 3 HOH B 17 317 37 HOH HOH . 
E 3 HOH B 18 318 87 HOH HOH . 
E 3 HOH B 19 319 22 HOH HOH . 
E 3 HOH B 20 320 30 HOH HOH . 
E 3 HOH B 21 321 42 HOH HOH . 
E 3 HOH B 22 322 81 HOH HOH . 
E 3 HOH B 23 323 102 HOH HOH . 
E 3 HOH B 24 324 94 HOH HOH . 
E 3 HOH B 25 325 54 HOH HOH . 
E 3 HOH B 26 326 31 HOH HOH . 
E 3 HOH B 27 327 3 HOH HOH . 
E 3 HOH B 28 328 80 HOH HOH . 
E 3 HOH B 29 329 6 HOH HOH . 
E 3 HOH B 30 330 26 HOH HOH . 
E 3 HOH B 31 331 65 HOH HOH . 
E 3 HOH B 32 332 96 HOH HOH . 
E 3 HOH B 33 333 24 HOH HOH . 
E 3 HOH B 34 334 52 HOH HOH . 
E 3 HOH B 35 335 19 HOH HOH . 
E 3 HOH B 36 336 14 HOH HOH . 
E 3 HOH B 37 337 92 HOH HOH . 
E 3 HOH B 38 338 82 HOH HOH . 
E 3 HOH B 39 339 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C5 53Q . . . C 2 -15.474 -0.917 -7.06 0.84 59.24 ? C5 53Q 301 A 1 
HETATM 2 C C6 53Q . . . C 2 -13.927 -1.503 -5.305 0.84 67.35 ? C6 53Q 301 A 1 
HETATM 3 C C7 53Q . . . C 2 -13.139 -2.436 -4.649 0.84 66.07 ? C7 53Q 301 A 1 
HETATM 4 C C8 53Q . . . C 2 -12.422 -2.055 -3.527 0.84 64.71 ? C8 53Q 301 A 1 
HETATM 5 C C9 53Q . . . C 2 -12.477 -0.75 -3.045 0.84 64.17 ? C9 53Q 301 A 1 
HETATM 6 C C10 53Q . . . C 2 -13.262 0.175 -3.732 0.84 64.99 ? C10 53Q 301 A 1 
HETATM 7 C C11 53Q . . . C 2 -13.989 -0.196 -4.85 0.84 66.24 ? C11 53Q 301 A 1 
HETATM 8 C C12 53Q . . . C 2 -11.74 -0.361 -1.815 0.84 58.89 ? C12 53Q 301 A 1 
HETATM 9 C C13 53Q . . . C 2 -11.864 -1.045 -0.614 0.84 59.54 ? C13 53Q 301 A 1 
HETATM 10 C C14 53Q . . . C 2 -12.786 -2.149 -0.275 0.84 54.03 ? C14 53Q 301 A 1 
HETATM 11 C C15 53Q . . . C 2 -12.407 -3.474 -0.476 0.84 48.11 ? C15 53Q 301 A 1 
HETATM 12 CL CL 53Q . . . C 2 -10.816 -0.727 0.724 0.84 64.34 ? CL 53Q 301 A 1 
HETATM 13 C C19 53Q . . . C 2 -14.011 -1.888 0.328 0.84 49.55 ? C19 53Q 301 A 1 
HETATM 14 C C18 53Q . . . C 2 -14.835 -2.927 0.726 0.84 48.78 ? C18 53Q 301 A 1 
HETATM 15 C C17 53Q . . . C 2 -14.447 -4.235 0.53 0.84 46.98 ? C17 53Q 301 A 1 
HETATM 16 C C16 53Q . . . C 2 -13.236 -4.507 -0.07 0.84 43.75 ? C16 53Q 301 A 1 
HETATM 17 C C20 53Q . . . C 2 -10.791 0.776 -1.987 0.84 51.07 ? C20 53Q 301 A 1 
HETATM 18 C C25 53Q . . . C 2 -10.099 0.943 -3.184 0.84 46.8 ? C25 53Q 301 A 1 
HETATM 19 C C24 53Q . . . C 2 -9.214 1.994 -3.346 0.84 40.9 ? C24 53Q 301 A 1 
HETATM 20 C C23 53Q . . . C 2 -9.003 2.889 -2.323 0.84 42.45 ? C23 53Q 301 A 1 
HETATM 21 C C22 53Q . . . C 2 -9.687 2.744 -1.136 0.84 47.77 ? C22 53Q 301 A 1 
HETATM 22 C C21 53Q . . . C 2 -10.578 1.7 -0.968 0.84 47.97 ? C21 53Q 301 A 1 
HETATM 23 O O 53Q . . . C 2 -14.653 -1.897 -6.407 0.84 65.34 ? O 53Q 301 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           23 
#