data_5CQO # _model_server_result.job_id pCzSftXfAmbStWrQqh3Cyw _model_server_result.datetime_utc '2025-09-03 22:03:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5CQO # _exptl.entry_id 5CQO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CQO _cell.length_a 52.87 _cell.length_b 149.55 _cell.length_c 79.39 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 20 A CYS 80 1_555 D HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc2 A O GLY 38 A GLY 98 1_555 D HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc3 A OG1 THR 59 A THR 119 1_555 C HG HG . A HG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.984 ? metalc ? metalc4 A SG CYS 224 A CYS 284 1_555 B HG HG . A HG 401 1_555 ? A ? ? ? ? ? ? ? ? ? ? 3.016 ? metalc ? metalc5 A SG CYS 224 A CYS 284 1_555 B HG HG . A HG 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc6 A SG CYS 224 A CYS 284 1_555 E HG HG . A HG 404 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.923 ? metalc ? metalc7 A O HIS 245 A HIS 305 1_555 E HG HG . A HG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.027 ? metalc ? metalc8 B HG HG . A HG 401 1_555 F O HOH . A HOH 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc9 C HG HG . A HG 402 1_555 F O HOH . A HOH 683 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc10 E HG HG . A HG 404 1_555 F O HOH . A HOH 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5CQO _atom_sites.fract_transf_matrix[1][1] 0.018914 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006687 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012596 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HG A 1 401 401 HG HG . C 2 HG A 1 402 402 HG HG . D 2 HG A 1 403 403 HG HG . E 2 HG A 1 404 1 HG HG . F 3 HOH A 1 501 89 HOH HOH . F 3 HOH A 2 502 108 HOH HOH . F 3 HOH A 3 503 94 HOH HOH . F 3 HOH A 4 504 102 HOH HOH . F 3 HOH A 5 505 172 HOH HOH . F 3 HOH A 6 506 75 HOH HOH . F 3 HOH A 7 507 95 HOH HOH . F 3 HOH A 8 508 9 HOH HOH . F 3 HOH A 9 509 136 HOH HOH . F 3 HOH A 10 510 105 HOH HOH . F 3 HOH A 11 511 90 HOH HOH . F 3 HOH A 12 512 29 HOH HOH . F 3 HOH A 13 513 86 HOH HOH . F 3 HOH A 14 514 112 HOH HOH . F 3 HOH A 15 515 58 HOH HOH . F 3 HOH A 16 516 109 HOH HOH . F 3 HOH A 17 517 117 HOH HOH . F 3 HOH A 18 518 74 HOH HOH . F 3 HOH A 19 519 143 HOH HOH . F 3 HOH A 20 520 180 HOH HOH . F 3 HOH A 21 521 40 HOH HOH . F 3 HOH A 22 522 119 HOH HOH . F 3 HOH A 23 523 130 HOH HOH . F 3 HOH A 24 524 79 HOH HOH . F 3 HOH A 25 525 41 HOH HOH . F 3 HOH A 26 526 121 HOH HOH . F 3 HOH A 27 527 120 HOH HOH . F 3 HOH A 28 528 57 HOH HOH . F 3 HOH A 29 529 92 HOH HOH . F 3 HOH A 30 530 116 HOH HOH . F 3 HOH A 31 531 12 HOH HOH . F 3 HOH A 32 532 126 HOH HOH . F 3 HOH A 33 533 87 HOH HOH . F 3 HOH A 34 534 103 HOH HOH . F 3 HOH A 35 535 48 HOH HOH . F 3 HOH A 36 536 14 HOH HOH . F 3 HOH A 37 537 18 HOH HOH . F 3 HOH A 38 538 165 HOH HOH . F 3 HOH A 39 539 23 HOH HOH . F 3 HOH A 40 540 133 HOH HOH . F 3 HOH A 41 541 77 HOH HOH . F 3 HOH A 42 542 3 HOH HOH . F 3 HOH A 43 543 2 HOH HOH . F 3 HOH A 44 544 124 HOH HOH . F 3 HOH A 45 545 118 HOH HOH . F 3 HOH A 46 546 170 HOH HOH . F 3 HOH A 47 547 111 HOH HOH . F 3 HOH A 48 548 33 HOH HOH . F 3 HOH A 49 549 15 HOH HOH . F 3 HOH A 50 550 16 HOH HOH . F 3 HOH A 51 551 30 HOH HOH . F 3 HOH A 52 552 32 HOH HOH . F 3 HOH A 53 553 169 HOH HOH . F 3 HOH A 54 554 181 HOH HOH . F 3 HOH A 55 555 35 HOH HOH . F 3 HOH A 56 556 24 HOH HOH . F 3 HOH A 57 557 45 HOH HOH . F 3 HOH A 58 558 13 HOH HOH . F 3 HOH A 59 559 50 HOH HOH . F 3 HOH A 60 560 52 HOH HOH . F 3 HOH A 61 561 6 HOH HOH . F 3 HOH A 62 562 63 HOH HOH . F 3 HOH A 63 563 91 HOH HOH . F 3 HOH A 64 564 179 HOH HOH . F 3 HOH A 65 565 5 HOH HOH . F 3 HOH A 66 566 167 HOH HOH . F 3 HOH A 67 567 110 HOH HOH . F 3 HOH A 68 568 56 HOH HOH . F 3 HOH A 69 569 73 HOH HOH . F 3 HOH A 70 570 113 HOH HOH . F 3 HOH A 71 571 69 HOH HOH . F 3 HOH A 72 572 53 HOH HOH . F 3 HOH A 73 573 1 HOH HOH . F 3 HOH A 74 574 88 HOH HOH . F 3 HOH A 75 575 144 HOH HOH . F 3 HOH A 76 576 10 HOH HOH . F 3 HOH A 77 577 122 HOH HOH . F 3 HOH A 78 578 39 HOH HOH . F 3 HOH A 79 579 149 HOH HOH . F 3 HOH A 80 580 47 HOH HOH . F 3 HOH A 81 581 85 HOH HOH . F 3 HOH A 82 582 34 HOH HOH . F 3 HOH A 83 583 137 HOH HOH . F 3 HOH A 84 584 104 HOH HOH . F 3 HOH A 85 585 93 HOH HOH . F 3 HOH A 86 586 132 HOH HOH . F 3 HOH A 87 587 134 HOH HOH . F 3 HOH A 88 588 26 HOH HOH . F 3 HOH A 89 589 46 HOH HOH . F 3 HOH A 90 590 71 HOH HOH . F 3 HOH A 91 591 36 HOH HOH . F 3 HOH A 92 592 19 HOH HOH . F 3 HOH A 93 593 156 HOH HOH . F 3 HOH A 94 594 37 HOH HOH . F 3 HOH A 95 595 96 HOH HOH . F 3 HOH A 96 596 80 HOH HOH . F 3 HOH A 97 597 70 HOH HOH . F 3 HOH A 98 598 7 HOH HOH . F 3 HOH A 99 599 21 HOH HOH . F 3 HOH A 100 600 81 HOH HOH . F 3 HOH A 101 601 4 HOH HOH . F 3 HOH A 102 602 131 HOH HOH . F 3 HOH A 103 603 176 HOH HOH . F 3 HOH A 104 604 51 HOH HOH . F 3 HOH A 105 605 31 HOH HOH . F 3 HOH A 106 606 183 HOH HOH . F 3 HOH A 107 607 123 HOH HOH . F 3 HOH A 108 608 76 HOH HOH . F 3 HOH A 109 609 148 HOH HOH . F 3 HOH A 110 610 154 HOH HOH . F 3 HOH A 111 611 107 HOH HOH . F 3 HOH A 112 612 66 HOH HOH . F 3 HOH A 113 613 68 HOH HOH . F 3 HOH A 114 614 54 HOH HOH . F 3 HOH A 115 615 129 HOH HOH . F 3 HOH A 116 616 138 HOH HOH . F 3 HOH A 117 617 135 HOH HOH . F 3 HOH A 118 618 43 HOH HOH . F 3 HOH A 119 619 42 HOH HOH . F 3 HOH A 120 620 164 HOH HOH . F 3 HOH A 121 621 60 HOH HOH . F 3 HOH A 122 622 17 HOH HOH . F 3 HOH A 123 623 61 HOH HOH . F 3 HOH A 124 624 82 HOH HOH . F 3 HOH A 125 625 166 HOH HOH . F 3 HOH A 126 626 8 HOH HOH . F 3 HOH A 127 627 142 HOH HOH . F 3 HOH A 128 628 72 HOH HOH . F 3 HOH A 129 629 152 HOH HOH . F 3 HOH A 130 630 28 HOH HOH . F 3 HOH A 131 631 27 HOH HOH . F 3 HOH A 132 632 141 HOH HOH . F 3 HOH A 133 633 55 HOH HOH . F 3 HOH A 134 634 62 HOH HOH . F 3 HOH A 135 635 97 HOH HOH . F 3 HOH A 136 636 98 HOH HOH . F 3 HOH A 137 637 22 HOH HOH . F 3 HOH A 138 638 115 HOH HOH . F 3 HOH A 139 639 20 HOH HOH . F 3 HOH A 140 640 178 HOH HOH . F 3 HOH A 141 641 114 HOH HOH . F 3 HOH A 142 642 83 HOH HOH . F 3 HOH A 143 643 49 HOH HOH . F 3 HOH A 144 644 59 HOH HOH . F 3 HOH A 145 645 158 HOH HOH . F 3 HOH A 146 646 100 HOH HOH . F 3 HOH A 147 647 139 HOH HOH . F 3 HOH A 148 648 185 HOH HOH . F 3 HOH A 149 649 182 HOH HOH . F 3 HOH A 150 650 67 HOH HOH . F 3 HOH A 151 651 140 HOH HOH . F 3 HOH A 152 652 65 HOH HOH . F 3 HOH A 153 653 127 HOH HOH . F 3 HOH A 154 654 101 HOH HOH . F 3 HOH A 155 655 174 HOH HOH . F 3 HOH A 156 656 146 HOH HOH . F 3 HOH A 157 657 150 HOH HOH . F 3 HOH A 158 658 160 HOH HOH . F 3 HOH A 159 659 145 HOH HOH . F 3 HOH A 160 660 155 HOH HOH . F 3 HOH A 161 661 153 HOH HOH . F 3 HOH A 162 662 159 HOH HOH . F 3 HOH A 163 663 125 HOH HOH . F 3 HOH A 164 664 168 HOH HOH . F 3 HOH A 165 665 147 HOH HOH . F 3 HOH A 166 666 84 HOH HOH . F 3 HOH A 167 667 99 HOH HOH . F 3 HOH A 168 668 78 HOH HOH . F 3 HOH A 169 669 44 HOH HOH . F 3 HOH A 170 670 11 HOH HOH . F 3 HOH A 171 671 64 HOH HOH . F 3 HOH A 172 672 151 HOH HOH . F 3 HOH A 173 673 128 HOH HOH . F 3 HOH A 174 674 177 HOH HOH . F 3 HOH A 175 675 157 HOH HOH . F 3 HOH A 176 676 106 HOH HOH . F 3 HOH A 177 677 171 HOH HOH . F 3 HOH A 178 678 163 HOH HOH . F 3 HOH A 179 679 161 HOH HOH . F 3 HOH A 180 680 175 HOH HOH . F 3 HOH A 181 681 25 HOH HOH . F 3 HOH A 182 682 38 HOH HOH . F 3 HOH A 183 683 173 HOH HOH . F 3 HOH A 184 684 162 HOH HOH . F 3 HOH A 185 685 184 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -3.402 _atom_site.Cartn_y -25.383 _atom_site.Cartn_z 1.437 _atom_site.occupancy 0.65 _atom_site.B_iso_or_equiv 35.79 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #