data_5CQW # _model_server_result.job_id -j5AMC594fN8qtniOi0vOw _model_server_result.datetime_utc '2024-10-13 05:14:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cqw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":409}' # _entry.id 5CQW # _exptl.entry_id 5CQW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CQW _cell.length_a 127.092 _cell.length_b 127.092 _cell.length_c 126.836 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CQW _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,V 1 1 B,M,N,O,P,Q,R,S,T,U,W 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N ? 5 T N N ? 5 U N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 5CQW _atom_sites.fract_transf_matrix[1][1] 0.007868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007884 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 JRJ A 1 401 2 JRJ JRJ . D 3 SO4 A 1 402 4 SO4 SO4 . E 3 SO4 A 1 403 5 SO4 SO4 . F 3 SO4 A 1 404 6 SO4 SO4 . G 3 SO4 A 1 405 9 SO4 SO4 . H 3 SO4 A 1 406 11 SO4 SO4 . I 3 SO4 A 1 407 12 SO4 SO4 . J 4 CL A 1 408 14 CL CL . K 5 GOL A 1 409 17 GOL GOL . L 5 GOL A 1 410 19 GOL GOL . M 2 JRJ B 1 401 1 JRJ JRJ . N 3 SO4 B 1 402 3 SO4 SO4 . O 3 SO4 B 1 403 7 SO4 SO4 . P 3 SO4 B 1 404 8 SO4 SO4 . Q 3 SO4 B 1 405 10 SO4 SO4 . R 3 SO4 B 1 406 13 SO4 SO4 . S 4 CL B 1 407 15 CL CL . T 5 GOL B 1 408 16 GOL GOL . U 5 GOL B 1 409 18 GOL GOL . V 6 HOH A 1 501 130 HOH HOH . V 6 HOH A 2 502 6 HOH HOH . V 6 HOH A 3 503 107 HOH HOH . V 6 HOH A 4 504 105 HOH HOH . V 6 HOH A 5 505 152 HOH HOH . V 6 HOH A 6 506 19 HOH HOH . V 6 HOH A 7 507 90 HOH HOH . V 6 HOH A 8 508 134 HOH HOH . V 6 HOH A 9 509 97 HOH HOH . V 6 HOH A 10 510 59 HOH HOH . V 6 HOH A 11 511 93 HOH HOH . V 6 HOH A 12 512 20 HOH HOH . V 6 HOH A 13 513 78 HOH HOH . V 6 HOH A 14 514 54 HOH HOH . V 6 HOH A 15 515 14 HOH HOH . V 6 HOH A 16 516 91 HOH HOH . V 6 HOH A 17 517 29 HOH HOH . V 6 HOH A 18 518 32 HOH HOH . V 6 HOH A 19 519 9 HOH HOH . V 6 HOH A 20 520 35 HOH HOH . V 6 HOH A 21 521 30 HOH HOH . V 6 HOH A 22 522 8 HOH HOH . V 6 HOH A 23 523 111 HOH HOH . V 6 HOH A 24 524 3 HOH HOH . V 6 HOH A 25 525 49 HOH HOH . V 6 HOH A 26 526 12 HOH HOH . V 6 HOH A 27 527 138 HOH HOH . V 6 HOH A 28 528 45 HOH HOH . V 6 HOH A 29 529 15 HOH HOH . V 6 HOH A 30 530 50 HOH HOH . V 6 HOH A 31 531 80 HOH HOH . V 6 HOH A 32 532 53 HOH HOH . V 6 HOH A 33 533 52 HOH HOH . V 6 HOH A 34 534 48 HOH HOH . V 6 HOH A 35 535 10 HOH HOH . V 6 HOH A 36 536 108 HOH HOH . V 6 HOH A 37 537 157 HOH HOH . V 6 HOH A 38 538 76 HOH HOH . V 6 HOH A 39 539 83 HOH HOH . V 6 HOH A 40 540 65 HOH HOH . V 6 HOH A 41 541 18 HOH HOH . V 6 HOH A 42 542 81 HOH HOH . V 6 HOH A 43 543 62 HOH HOH . V 6 HOH A 44 544 39 HOH HOH . V 6 HOH A 45 545 136 HOH HOH . V 6 HOH A 46 546 151 HOH HOH . V 6 HOH A 47 547 72 HOH HOH . V 6 HOH A 48 548 57 HOH HOH . V 6 HOH A 49 549 43 HOH HOH . V 6 HOH A 50 550 114 HOH HOH . V 6 HOH A 51 551 113 HOH HOH . V 6 HOH A 52 552 68 HOH HOH . V 6 HOH A 53 553 122 HOH HOH . V 6 HOH A 54 554 88 HOH HOH . V 6 HOH A 55 555 115 HOH HOH . V 6 HOH A 56 556 140 HOH HOH . V 6 HOH A 57 557 95 HOH HOH . V 6 HOH A 58 558 38 HOH HOH . V 6 HOH A 59 559 61 HOH HOH . V 6 HOH A 60 560 139 HOH HOH . V 6 HOH A 61 561 120 HOH HOH . V 6 HOH A 62 562 141 HOH HOH . V 6 HOH A 63 563 135 HOH HOH . V 6 HOH A 64 564 99 HOH HOH . V 6 HOH A 65 565 137 HOH HOH . V 6 HOH A 66 566 121 HOH HOH . V 6 HOH A 67 567 106 HOH HOH . W 6 HOH B 1 501 112 HOH HOH . W 6 HOH B 2 502 150 HOH HOH . W 6 HOH B 3 503 146 HOH HOH . W 6 HOH B 4 504 66 HOH HOH . W 6 HOH B 5 505 69 HOH HOH . W 6 HOH B 6 506 98 HOH HOH . W 6 HOH B 7 507 149 HOH HOH . W 6 HOH B 8 508 145 HOH HOH . W 6 HOH B 9 509 31 HOH HOH . W 6 HOH B 10 510 67 HOH HOH . W 6 HOH B 11 511 41 HOH HOH . W 6 HOH B 12 512 16 HOH HOH . W 6 HOH B 13 513 23 HOH HOH . W 6 HOH B 14 514 34 HOH HOH . W 6 HOH B 15 515 92 HOH HOH . W 6 HOH B 16 516 17 HOH HOH . W 6 HOH B 17 517 28 HOH HOH . W 6 HOH B 18 518 94 HOH HOH . W 6 HOH B 19 519 102 HOH HOH . W 6 HOH B 20 520 24 HOH HOH . W 6 HOH B 21 521 25 HOH HOH . W 6 HOH B 22 522 11 HOH HOH . W 6 HOH B 23 523 40 HOH HOH . W 6 HOH B 24 524 104 HOH HOH . W 6 HOH B 25 525 22 HOH HOH . W 6 HOH B 26 526 5 HOH HOH . W 6 HOH B 27 527 73 HOH HOH . W 6 HOH B 28 528 26 HOH HOH . W 6 HOH B 29 529 7 HOH HOH . W 6 HOH B 30 530 64 HOH HOH . W 6 HOH B 31 531 142 HOH HOH . W 6 HOH B 32 532 77 HOH HOH . W 6 HOH B 33 533 4 HOH HOH . W 6 HOH B 34 534 46 HOH HOH . W 6 HOH B 35 535 82 HOH HOH . W 6 HOH B 36 536 13 HOH HOH . W 6 HOH B 37 537 1 HOH HOH . W 6 HOH B 38 538 2 HOH HOH . W 6 HOH B 39 539 58 HOH HOH . W 6 HOH B 40 540 21 HOH HOH . W 6 HOH B 41 541 156 HOH HOH . W 6 HOH B 42 542 89 HOH HOH . W 6 HOH B 43 543 70 HOH HOH . W 6 HOH B 44 544 75 HOH HOH . W 6 HOH B 45 545 27 HOH HOH . W 6 HOH B 46 546 37 HOH HOH . W 6 HOH B 47 547 148 HOH HOH . W 6 HOH B 48 548 103 HOH HOH . W 6 HOH B 49 549 36 HOH HOH . W 6 HOH B 50 550 155 HOH HOH . W 6 HOH B 51 551 100 HOH HOH . W 6 HOH B 52 552 126 HOH HOH . W 6 HOH B 53 553 79 HOH HOH . W 6 HOH B 54 554 44 HOH HOH . W 6 HOH B 55 555 51 HOH HOH . W 6 HOH B 56 556 63 HOH HOH . W 6 HOH B 57 557 116 HOH HOH . W 6 HOH B 58 558 96 HOH HOH . W 6 HOH B 59 559 71 HOH HOH . W 6 HOH B 60 560 119 HOH HOH . W 6 HOH B 61 561 42 HOH HOH . W 6 HOH B 62 562 109 HOH HOH . W 6 HOH B 63 563 56 HOH HOH . W 6 HOH B 64 564 55 HOH HOH . W 6 HOH B 65 565 84 HOH HOH . W 6 HOH B 66 566 110 HOH HOH . W 6 HOH B 67 567 87 HOH HOH . W 6 HOH B 68 568 125 HOH HOH . W 6 HOH B 69 569 74 HOH HOH . W 6 HOH B 70 570 85 HOH HOH . W 6 HOH B 71 571 133 HOH HOH . W 6 HOH B 72 572 132 HOH HOH . W 6 HOH B 73 573 129 HOH HOH . W 6 HOH B 74 574 33 HOH HOH . W 6 HOH B 75 575 144 HOH HOH . W 6 HOH B 76 576 124 HOH HOH . W 6 HOH B 77 577 47 HOH HOH . W 6 HOH B 78 578 60 HOH HOH . W 6 HOH B 79 579 117 HOH HOH . W 6 HOH B 80 580 118 HOH HOH . W 6 HOH B 81 581 101 HOH HOH . W 6 HOH B 82 582 86 HOH HOH . W 6 HOH B 83 583 147 HOH HOH . W 6 HOH B 84 584 143 HOH HOH . W 6 HOH B 85 585 127 HOH HOH . W 6 HOH B 86 586 123 HOH HOH . W 6 HOH B 87 587 128 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . U 5 19.852 23.573 101.636 1 62.3 ? C1 GOL 409 B 1 HETATM 2 O O1 GOL . . . U 5 18.996 24.577 102.131 1 78.93 ? O1 GOL 409 B 1 HETATM 3 C C2 GOL . . . U 5 21.243 24.154 101.403 1 66.51 ? C2 GOL 409 B 1 HETATM 4 O O2 GOL . . . U 5 21.463 24.305 100.02 1 73.34 ? O2 GOL 409 B 1 HETATM 5 C C3 GOL . . . U 5 21.367 25.512 102.086 1 55.29 ? C3 GOL 409 B 1 HETATM 6 O O3 GOL . . . U 5 22.636 26.061 101.811 1 55.02 ? O3 GOL 409 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #