data_5CR7 # _model_server_result.job_id NCvtFGxjJklbIpB3eYXAkQ _model_server_result.datetime_utc '2024-11-15 13:07:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cr7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":608}' # _entry.id 5CR7 # _exptl.entry_id 5CR7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.49 _cell.angle_gamma 90 _cell.entry_id 5CR7 _cell.length_a 143.65 _cell.length_b 123.88 _cell.length_c 90.58 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CR7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 104.668575 0 81.76298 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N ? 4 Z N N ? 4 AA N N ? 4 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 70 A ASP 52 1_555 L MG MG . A MG 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc2 A O ASP 72 A ASP 54 1_555 L MG MG . A MG 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc3 A OD1 ASP 369 A ASP 351 1_555 L MG MG . A MG 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc4 J O3 PO4 . A PO4 608 1_555 L MG MG . A MG 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc5 L MG MG . A MG 610 1_555 GA O HOH . A HOH 739 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc6 B OD2 ASP 70 B ASP 52 1_555 CA MG MG . B MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc7 B O ASP 72 B ASP 54 1_555 CA MG MG . B MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc8 B OD1 ASP 369 B ASP 351 1_555 CA MG MG . B MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc9 Z O1 PO4 . B PO4 606 1_555 CA MG MG . B MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 328 n n P O2 PO4 sing 329 n n P O3 PO4 sing 330 n n P O4 PO4 sing 331 n n # _atom_sites.entry_id 5CR7 _atom_sites.fract_transf_matrix[1][1] 0.006961 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003319 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008072 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01223 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 5WO A 1 601 1 5WO DRG . D 3 ACT A 1 602 5 ACT ACT . E 3 ACT A 1 603 7 ACT ACT . F 3 ACT A 1 604 11 ACT ACT . G 3 ACT A 1 605 13 ACT ACT . H 3 ACT A 1 606 14 ACT ACT . I 3 ACT A 1 607 15 ACT ACT . J 4 PO4 A 1 608 1 PO4 PO4 . K 4 PO4 A 1 609 3 PO4 PO4 . L 5 MG A 1 610 4 MG MG . M 6 GOL A 1 611 1 GOL GOL . N 6 GOL A 1 612 2 GOL GOL . O 6 GOL A 1 613 11 GOL GOL . P 6 GOL A 1 614 12 GOL GOL . Q 6 GOL A 1 615 13 GOL GOL . R 6 GOL A 1 616 14 GOL GOL . S 6 GOL A 1 617 15 GOL GOL . T 6 GOL A 1 618 16 GOL GOL . U 2 5WO B 1 601 2 5WO DRG . V 3 ACT B 1 602 3 ACT ACT . W 3 ACT B 1 603 4 ACT ACT . X 3 ACT B 1 604 8 ACT ACT . Y 3 ACT B 1 605 12 ACT ACT . Z 4 PO4 B 1 606 2 PO4 PO4 . AA 4 PO4 B 1 607 4 PO4 PO4 . BA 4 PO4 B 1 608 5 PO4 PO4 . CA 5 MG B 1 609 1 MG MG . DA 6 GOL B 1 610 5 GOL GOL . EA 6 GOL B 1 611 6 GOL GOL . FA 6 GOL B 1 612 18 GOL GOL . GA 7 HOH A 1 701 57 HOH HOH . GA 7 HOH A 2 702 72 HOH HOH . GA 7 HOH A 3 703 165 HOH HOH . GA 7 HOH A 4 704 68 HOH HOH . GA 7 HOH A 5 705 62 HOH HOH . GA 7 HOH A 6 706 7 HOH HOH . GA 7 HOH A 7 707 3 HOH HOH . GA 7 HOH A 8 708 14 HOH HOH . GA 7 HOH A 9 709 17 HOH HOH . GA 7 HOH A 10 710 2 HOH HOH . GA 7 HOH A 11 711 8 HOH HOH . GA 7 HOH A 12 712 22 HOH HOH . GA 7 HOH A 13 713 9 HOH HOH . GA 7 HOH A 14 714 35 HOH HOH . GA 7 HOH A 15 715 43 HOH HOH . GA 7 HOH A 16 716 29 HOH HOH . GA 7 HOH A 17 717 69 HOH HOH . GA 7 HOH A 18 718 163 HOH HOH . GA 7 HOH A 19 719 59 HOH HOH . GA 7 HOH A 20 720 58 HOH HOH . GA 7 HOH A 21 721 34 HOH HOH . GA 7 HOH A 22 722 124 HOH HOH . GA 7 HOH A 23 723 10 HOH HOH . GA 7 HOH A 24 724 63 HOH HOH . GA 7 HOH A 25 725 27 HOH HOH . GA 7 HOH A 26 726 145 HOH HOH . GA 7 HOH A 27 727 25 HOH HOH . GA 7 HOH A 28 728 42 HOH HOH . GA 7 HOH A 29 729 26 HOH HOH . GA 7 HOH A 30 730 46 HOH HOH . GA 7 HOH A 31 731 51 HOH HOH . GA 7 HOH A 32 732 33 HOH HOH . GA 7 HOH A 33 733 23 HOH HOH . GA 7 HOH A 34 734 173 HOH HOH . GA 7 HOH A 35 735 130 HOH HOH . GA 7 HOH A 36 736 44 HOH HOH . GA 7 HOH A 37 737 67 HOH HOH . GA 7 HOH A 38 738 147 HOH HOH . GA 7 HOH A 39 739 60 HOH HOH . GA 7 HOH A 40 740 114 HOH HOH . GA 7 HOH A 41 741 132 HOH HOH . GA 7 HOH A 42 742 32 HOH HOH . GA 7 HOH A 43 743 21 HOH HOH . GA 7 HOH A 44 744 134 HOH HOH . GA 7 HOH A 45 745 52 HOH HOH . GA 7 HOH A 46 746 31 HOH HOH . GA 7 HOH A 47 747 216 HOH HOH . GA 7 HOH A 48 748 98 HOH HOH . GA 7 HOH A 49 749 61 HOH HOH . GA 7 HOH A 50 750 28 HOH HOH . GA 7 HOH A 51 751 125 HOH HOH . GA 7 HOH A 52 752 86 HOH HOH . GA 7 HOH A 53 753 55 HOH HOH . GA 7 HOH A 54 754 92 HOH HOH . GA 7 HOH A 55 755 96 HOH HOH . GA 7 HOH A 56 756 85 HOH HOH . GA 7 HOH A 57 757 39 HOH HOH . GA 7 HOH A 58 758 127 HOH HOH . GA 7 HOH A 59 759 143 HOH HOH . GA 7 HOH A 60 760 146 HOH HOH . GA 7 HOH A 61 761 135 HOH HOH . GA 7 HOH A 62 762 131 HOH HOH . GA 7 HOH A 63 763 160 HOH HOH . GA 7 HOH A 64 764 138 HOH HOH . GA 7 HOH A 65 765 75 HOH HOH . GA 7 HOH A 66 766 187 HOH HOH . GA 7 HOH A 67 767 136 HOH HOH . GA 7 HOH A 68 768 93 HOH HOH . GA 7 HOH A 69 769 109 HOH HOH . GA 7 HOH A 70 770 144 HOH HOH . GA 7 HOH A 71 771 76 HOH HOH . GA 7 HOH A 72 772 158 HOH HOH . GA 7 HOH A 73 773 101 HOH HOH . GA 7 HOH A 74 774 71 HOH HOH . GA 7 HOH A 75 775 137 HOH HOH . GA 7 HOH A 76 776 128 HOH HOH . GA 7 HOH A 77 777 110 HOH HOH . GA 7 HOH A 78 778 115 HOH HOH . GA 7 HOH A 79 779 164 HOH HOH . GA 7 HOH A 80 780 111 HOH HOH . GA 7 HOH A 81 781 161 HOH HOH . GA 7 HOH A 82 782 154 HOH HOH . GA 7 HOH A 83 783 156 HOH HOH . GA 7 HOH A 84 784 183 HOH HOH . GA 7 HOH A 85 785 208 HOH HOH . GA 7 HOH A 86 786 91 HOH HOH . GA 7 HOH A 87 787 182 HOH HOH . GA 7 HOH A 88 788 218 HOH HOH . GA 7 HOH A 89 789 133 HOH HOH . GA 7 HOH A 90 790 97 HOH HOH . GA 7 HOH A 91 791 140 HOH HOH . GA 7 HOH A 92 792 162 HOH HOH . GA 7 HOH A 93 793 112 HOH HOH . GA 7 HOH A 94 794 81 HOH HOH . GA 7 HOH A 95 795 139 HOH HOH . GA 7 HOH A 96 796 186 HOH HOH . GA 7 HOH A 97 797 184 HOH HOH . GA 7 HOH A 98 798 102 HOH HOH . GA 7 HOH A 99 799 106 HOH HOH . GA 7 HOH A 100 800 177 HOH HOH . GA 7 HOH A 101 801 103 HOH HOH . GA 7 HOH A 102 802 153 HOH HOH . GA 7 HOH A 103 803 180 HOH HOH . GA 7 HOH A 104 804 202 HOH HOH . GA 7 HOH A 105 805 148 HOH HOH . GA 7 HOH A 106 806 105 HOH HOH . GA 7 HOH A 107 807 181 HOH HOH . GA 7 HOH A 108 808 155 HOH HOH . GA 7 HOH A 109 809 151 HOH HOH . GA 7 HOH A 110 810 152 HOH HOH . GA 7 HOH A 111 811 104 HOH HOH . GA 7 HOH A 112 812 203 HOH HOH . GA 7 HOH A 113 813 185 HOH HOH . GA 7 HOH A 114 814 149 HOH HOH . GA 7 HOH A 115 815 205 HOH HOH . GA 7 HOH A 116 816 207 HOH HOH . GA 7 HOH A 117 817 195 HOH HOH . GA 7 HOH A 118 818 204 HOH HOH . GA 7 HOH A 119 819 150 HOH HOH . GA 7 HOH A 120 820 188 HOH HOH . GA 7 HOH A 121 821 206 HOH HOH . GA 7 HOH A 122 822 190 HOH HOH . GA 7 HOH A 123 823 191 HOH HOH . GA 7 HOH A 124 824 194 HOH HOH . GA 7 HOH A 125 825 189 HOH HOH . GA 7 HOH A 126 826 192 HOH HOH . GA 7 HOH A 127 827 193 HOH HOH . HA 7 HOH B 1 701 24 HOH HOH . HA 7 HOH B 2 702 74 HOH HOH . HA 7 HOH B 3 703 64 HOH HOH . HA 7 HOH B 4 704 4 HOH HOH . HA 7 HOH B 5 705 15 HOH HOH . HA 7 HOH B 6 706 20 HOH HOH . HA 7 HOH B 7 707 38 HOH HOH . HA 7 HOH B 8 708 48 HOH HOH . HA 7 HOH B 9 709 5 HOH HOH . HA 7 HOH B 10 710 66 HOH HOH . HA 7 HOH B 11 711 217 HOH HOH . HA 7 HOH B 12 712 12 HOH HOH . HA 7 HOH B 13 713 37 HOH HOH . HA 7 HOH B 14 714 11 HOH HOH . HA 7 HOH B 15 715 47 HOH HOH . HA 7 HOH B 16 716 13 HOH HOH . HA 7 HOH B 17 717 40 HOH HOH . HA 7 HOH B 18 718 49 HOH HOH . HA 7 HOH B 19 719 19 HOH HOH . HA 7 HOH B 20 720 41 HOH HOH . HA 7 HOH B 21 721 210 HOH HOH . HA 7 HOH B 22 722 214 HOH HOH . HA 7 HOH B 23 723 30 HOH HOH . HA 7 HOH B 24 724 6 HOH HOH . HA 7 HOH B 25 725 45 HOH HOH . HA 7 HOH B 26 726 1 HOH HOH . HA 7 HOH B 27 727 16 HOH HOH . HA 7 HOH B 28 728 56 HOH HOH . HA 7 HOH B 29 729 95 HOH HOH . HA 7 HOH B 30 730 199 HOH HOH . HA 7 HOH B 31 731 83 HOH HOH . HA 7 HOH B 32 732 18 HOH HOH . HA 7 HOH B 33 733 84 HOH HOH . HA 7 HOH B 34 734 117 HOH HOH . HA 7 HOH B 35 735 120 HOH HOH . HA 7 HOH B 36 736 53 HOH HOH . HA 7 HOH B 37 737 215 HOH HOH . HA 7 HOH B 38 738 50 HOH HOH . HA 7 HOH B 39 739 94 HOH HOH . HA 7 HOH B 40 740 79 HOH HOH . HA 7 HOH B 41 741 198 HOH HOH . HA 7 HOH B 42 742 54 HOH HOH . HA 7 HOH B 43 743 197 HOH HOH . HA 7 HOH B 44 744 77 HOH HOH . HA 7 HOH B 45 745 126 HOH HOH . HA 7 HOH B 46 746 80 HOH HOH . HA 7 HOH B 47 747 171 HOH HOH . HA 7 HOH B 48 748 172 HOH HOH . HA 7 HOH B 49 749 82 HOH HOH . HA 7 HOH B 50 750 87 HOH HOH . HA 7 HOH B 51 751 65 HOH HOH . HA 7 HOH B 52 752 116 HOH HOH . HA 7 HOH B 53 753 166 HOH HOH . HA 7 HOH B 54 754 196 HOH HOH . HA 7 HOH B 55 755 200 HOH HOH . HA 7 HOH B 56 756 167 HOH HOH . HA 7 HOH B 57 757 88 HOH HOH . HA 7 HOH B 58 758 121 HOH HOH . HA 7 HOH B 59 759 122 HOH HOH . HA 7 HOH B 60 760 176 HOH HOH . HA 7 HOH B 61 761 89 HOH HOH . HA 7 HOH B 62 762 201 HOH HOH . HA 7 HOH B 63 763 90 HOH HOH . HA 7 HOH B 64 764 118 HOH HOH . HA 7 HOH B 65 765 170 HOH HOH . HA 7 HOH B 66 766 168 HOH HOH . HA 7 HOH B 67 767 123 HOH HOH . HA 7 HOH B 68 768 119 HOH HOH . HA 7 HOH B 69 769 169 HOH HOH . HA 7 HOH B 70 770 178 HOH HOH . HA 7 HOH B 71 771 179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . J 4 69.522 65.565 43.418 1 24.02 ? P PO4 608 A 1 HETATM 2 O O1 PO4 . . . J 4 68.855 64.413 42.7 1 14.92 ? O1 PO4 608 A 1 HETATM 3 O O2 PO4 . . . J 4 70.867 65.861 42.798 1 12.41 ? O2 PO4 608 A 1 HETATM 4 O O3 PO4 . . . J 4 69.698 65.21 44.879 1 13.38 ? O3 PO4 608 A 1 HETATM 5 O O4 PO4 . . . J 4 68.653 66.788 43.287 1 17.9 ? O4 PO4 608 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #