data_5CRM # _model_server_result.job_id rz3907L-og7v6hiOtb5yAg _model_server_result.datetime_utc '2024-11-16 07:58:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5crm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":207}' # _entry.id 5CRM # _exptl.entry_id 5CRM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CRM _cell.length_a 34.49 _cell.length_b 47.31 _cell.length_c 77.98 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CRM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 5CRM _atom_sites.fract_transf_matrix[1][1] 0.028994 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021137 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012824 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 201 1 NO3 NO3 . C 2 NO3 A 1 202 2 NO3 NO3 . D 3 EB5 A 1 203 1 EB5 EB5 . E 4 GOL A 1 204 1 GOL GOL . F 5 EDO A 1 205 1 EDO EDO . G 6 DMS A 1 206 1 DMS DMS . H 6 DMS A 1 207 2 DMS DMS . I 7 HOH A 1 301 53 HOH HOH . I 7 HOH A 2 302 18 HOH HOH . I 7 HOH A 3 303 46 HOH HOH . I 7 HOH A 4 304 6 HOH HOH . I 7 HOH A 5 305 50 HOH HOH . I 7 HOH A 6 306 2 HOH HOH . I 7 HOH A 7 307 4 HOH HOH . I 7 HOH A 8 308 15 HOH HOH . I 7 HOH A 9 309 21 HOH HOH . I 7 HOH A 10 310 61 HOH HOH . I 7 HOH A 11 311 39 HOH HOH . I 7 HOH A 12 312 5 HOH HOH . I 7 HOH A 13 313 10 HOH HOH . I 7 HOH A 14 314 25 HOH HOH . I 7 HOH A 15 315 70 HOH HOH . I 7 HOH A 16 316 7 HOH HOH . I 7 HOH A 17 317 26 HOH HOH . I 7 HOH A 18 318 30 HOH HOH . I 7 HOH A 19 319 57 HOH HOH . I 7 HOH A 20 320 22 HOH HOH . I 7 HOH A 21 321 43 HOH HOH . I 7 HOH A 22 322 35 HOH HOH . I 7 HOH A 23 323 44 HOH HOH . I 7 HOH A 24 324 32 HOH HOH . I 7 HOH A 25 325 33 HOH HOH . I 7 HOH A 26 326 23 HOH HOH . I 7 HOH A 27 327 38 HOH HOH . I 7 HOH A 28 328 34 HOH HOH . I 7 HOH A 29 329 27 HOH HOH . I 7 HOH A 30 330 19 HOH HOH . I 7 HOH A 31 331 37 HOH HOH . I 7 HOH A 32 332 58 HOH HOH . I 7 HOH A 33 333 12 HOH HOH . I 7 HOH A 34 334 62 HOH HOH . I 7 HOH A 35 335 47 HOH HOH . I 7 HOH A 36 336 16 HOH HOH . I 7 HOH A 37 337 24 HOH HOH . I 7 HOH A 38 338 42 HOH HOH . I 7 HOH A 39 339 9 HOH HOH . I 7 HOH A 40 340 3 HOH HOH . I 7 HOH A 41 341 36 HOH HOH . I 7 HOH A 42 342 51 HOH HOH . I 7 HOH A 43 343 14 HOH HOH . I 7 HOH A 44 344 13 HOH HOH . I 7 HOH A 45 345 67 HOH HOH . I 7 HOH A 46 346 55 HOH HOH . I 7 HOH A 47 347 49 HOH HOH . I 7 HOH A 48 348 69 HOH HOH . I 7 HOH A 49 349 40 HOH HOH . I 7 HOH A 50 350 60 HOH HOH . I 7 HOH A 51 351 28 HOH HOH . I 7 HOH A 52 352 20 HOH HOH . I 7 HOH A 53 353 31 HOH HOH . I 7 HOH A 54 354 65 HOH HOH . I 7 HOH A 55 355 8 HOH HOH . I 7 HOH A 56 356 41 HOH HOH . I 7 HOH A 57 357 45 HOH HOH . I 7 HOH A 58 358 48 HOH HOH . I 7 HOH A 59 359 68 HOH HOH . I 7 HOH A 60 360 64 HOH HOH . I 7 HOH A 61 361 66 HOH HOH . I 7 HOH A 62 362 1 HOH HOH . I 7 HOH A 63 363 54 HOH HOH . I 7 HOH A 64 364 29 HOH HOH . I 7 HOH A 65 365 52 HOH HOH . I 7 HOH A 66 366 17 HOH HOH . I 7 HOH A 67 367 63 HOH HOH . I 7 HOH A 68 368 56 HOH HOH . I 7 HOH A 69 369 59 HOH HOH . I 7 HOH A 70 370 11 HOH HOH . I 7 HOH A 71 371 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . H 6 -6.432 -11.143 26.803 1 70.35 ? S DMS 207 A 1 HETATM 2 O O DMS . . . H 6 -5.595 -12.032 25.98 1 71.5 ? O DMS 207 A 1 HETATM 3 C C1 DMS . . . H 6 -6.331 -11.704 28.415 1 70.49 ? C1 DMS 207 A 1 HETATM 4 C C2 DMS . . . H 6 -5.725 -9.587 26.893 1 67.09 ? C2 DMS 207 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #