data_5CS8
#
_model_server_result.job_id            EaO4b_YBmMU0MsyagGF2CQ 
_model_server_result.datetime_utc      '2024-11-21 23:27:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cs8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":206}' 
#
_entry.id    5CS8 
#
_exptl.entry_id    5CS8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CS8 
_cell.length_a            34.96 
_cell.length_b            47.22 
_cell.length_c            78.08 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CS8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 133 n n 
C1 C2 EDO sing 134 n n 
C1 H11 EDO sing 135 n n 
C1 H12 EDO sing 136 n n 
O1 HO1 EDO sing 137 n n 
C2 O2 EDO sing 138 n n 
C2 H21 EDO sing 139 n n 
C2 H22 EDO sing 140 n n 
O2 HO2 EDO sing 141 n n 
#
_atom_sites.entry_id                     5CS8 
_atom_sites.fract_transf_matrix[1][1]    0.028604 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021178 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012807 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EB8 A 1 201 1 EB8 EB8 . 
C 3 NO3 A 1 202 1 NO3 NO3 . 
D 3 NO3 A 1 203 2 NO3 NO3 . 
E 4 EDO A 1 204 1 EDO EDO . 
F 4 EDO A 1 205 3 EDO EDO . 
G 4 EDO A 1 206 4 EDO EDO . 
H 5 GOL A 1 207 1 GOL GOL . 
I 5 GOL A 1 208 3 GOL GOL . 
J 5 GOL A 1 209 4 GOL GOL . 
K 6 HOH A 1 301 33 HOH HOH . 
K 6 HOH A 2 302 40 HOH HOH . 
K 6 HOH A 3 303 25 HOH HOH . 
K 6 HOH A 4 304 11 HOH HOH . 
K 6 HOH A 5 305 10 HOH HOH . 
K 6 HOH A 6 306 21 HOH HOH . 
K 6 HOH A 7 307 13 HOH HOH . 
K 6 HOH A 8 308 20 HOH HOH . 
K 6 HOH A 9 309 46 HOH HOH . 
K 6 HOH A 10 310 53 HOH HOH . 
K 6 HOH A 11 311 23 HOH HOH . 
K 6 HOH A 12 312 9 HOH HOH . 
K 6 HOH A 13 313 30 HOH HOH . 
K 6 HOH A 14 314 31 HOH HOH . 
K 6 HOH A 15 315 3 HOH HOH . 
K 6 HOH A 16 316 28 HOH HOH . 
K 6 HOH A 17 317 41 HOH HOH . 
K 6 HOH A 18 318 1 HOH HOH . 
K 6 HOH A 19 319 47 HOH HOH . 
K 6 HOH A 20 320 27 HOH HOH . 
K 6 HOH A 21 321 39 HOH HOH . 
K 6 HOH A 22 322 18 HOH HOH . 
K 6 HOH A 23 323 37 HOH HOH . 
K 6 HOH A 24 324 17 HOH HOH . 
K 6 HOH A 25 325 38 HOH HOH . 
K 6 HOH A 26 326 6 HOH HOH . 
K 6 HOH A 27 327 24 HOH HOH . 
K 6 HOH A 28 328 7 HOH HOH . 
K 6 HOH A 29 329 16 HOH HOH . 
K 6 HOH A 30 330 14 HOH HOH . 
K 6 HOH A 31 331 43 HOH HOH . 
K 6 HOH A 32 332 50 HOH HOH . 
K 6 HOH A 33 333 15 HOH HOH . 
K 6 HOH A 34 334 2 HOH HOH . 
K 6 HOH A 35 335 51 HOH HOH . 
K 6 HOH A 36 336 12 HOH HOH . 
K 6 HOH A 37 337 4 HOH HOH . 
K 6 HOH A 38 338 44 HOH HOH . 
K 6 HOH A 39 339 22 HOH HOH . 
K 6 HOH A 40 340 34 HOH HOH . 
K 6 HOH A 41 341 32 HOH HOH . 
K 6 HOH A 42 342 42 HOH HOH . 
K 6 HOH A 43 343 8 HOH HOH . 
K 6 HOH A 44 344 19 HOH HOH . 
K 6 HOH A 45 345 45 HOH HOH . 
K 6 HOH A 46 346 5 HOH HOH . 
K 6 HOH A 47 347 26 HOH HOH . 
K 6 HOH A 48 348 29 HOH HOH . 
K 6 HOH A 49 349 52 HOH HOH . 
K 6 HOH A 50 350 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 4 19.181 -7.808 -31.391 1 41.8 ? C1 EDO 206 A 1 
HETATM 2 O O1 EDO . . . G 4 18.024 -8.412 -30.779 1 42.14 ? O1 EDO 206 A 1 
HETATM 3 C C2 EDO . . . G 4 18.878 -6.564 -32.224 1 44.06 ? C2 EDO 206 A 1 
HETATM 4 O O2 EDO . . . G 4 17.666 -5.914 -31.837 1 45.46 ? O2 EDO 206 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#