data_5CT6 # _model_server_result.job_id fu-l0xa5xXNVpmNUy2ItTQ _model_server_result.datetime_utc '2024-10-20 20:37:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ct6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":206}' # _entry.id 5CT6 # _exptl.entry_id 5CT6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 139.218 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-butyl-3-methyl-1H-imidazol-3-ium _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CT6 _cell.length_a 74.901 _cell.length_b 74.901 _cell.length_c 112.351 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,N 1 1 B,I,J,K,L,M,O 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 K N N ? 3 L N N ? 3 M N N # _chem_comp.formula 'C8 H15 N2 1' _chem_comp.formula_weight 139.218 _chem_comp.id BM0 _chem_comp.mon_nstd_flag . _chem_comp.name 1-butyl-3-methyl-1H-imidazol-3-ium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-butyl-3-methylimidazolium # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 N BM0 sing 70 n y C6 N1 BM0 doub 71 n y C3 C2 BM0 sing 72 n n C3 N BM0 sing 73 n n C2 C1 BM0 sing 74 n n N C4 BM0 sing 75 n y C7 N1 BM0 sing 76 n n N1 C5 BM0 sing 77 n y C1 C BM0 sing 78 n n C4 C5 BM0 doub 79 n y C1 H4 BM0 sing 80 n n C1 H3 BM0 sing 81 n n C2 H5 BM0 sing 82 n n C2 H6 BM0 sing 83 n n C3 H8 BM0 sing 84 n n C3 H7 BM0 sing 85 n n C4 H9 BM0 sing 86 n n C5 H10 BM0 sing 87 n n C6 H11 BM0 sing 88 n n C7 H13 BM0 sing 89 n n C7 H14 BM0 sing 90 n n C7 H12 BM0 sing 91 n n C H BM0 sing 92 n n C H2 BM0 sing 93 n n C H1 BM0 sing 94 n n # _atom_sites.entry_id 5CT6 _atom_sites.fract_transf_matrix[1][1] 0.013351 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013351 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008901 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 201 3 CL CL . D 3 BM0 A 1 202 2 BM0 BM0 . E 3 BM0 A 1 203 4 BM0 BM0 . F 3 BM0 A 1 204 5 BM0 BM0 . G 3 BM0 A 1 205 6 BM0 BM0 . H 3 BM0 A 1 206 8 BM0 BM0 . I 2 CL B 1 201 1 CL CL . J 2 CL B 1 202 2 CL CL . K 3 BM0 B 1 203 1 BM0 BM0 . L 3 BM0 B 1 204 3 BM0 BM0 . M 3 BM0 B 1 205 7 BM0 BM0 . N 4 HOH A 1 301 105 HOH HOH . N 4 HOH A 2 302 122 HOH HOH . N 4 HOH A 3 303 149 HOH HOH . N 4 HOH A 4 304 58 HOH HOH . N 4 HOH A 5 305 49 HOH HOH . N 4 HOH A 6 306 95 HOH HOH . N 4 HOH A 7 307 1 HOH HOH . N 4 HOH A 8 308 62 HOH HOH . N 4 HOH A 9 309 9 HOH HOH . N 4 HOH A 10 310 119 HOH HOH . N 4 HOH A 11 311 36 HOH HOH . N 4 HOH A 12 312 51 HOH HOH . N 4 HOH A 13 313 22 HOH HOH . N 4 HOH A 14 314 11 HOH HOH . N 4 HOH A 15 315 128 HOH HOH . N 4 HOH A 16 316 41 HOH HOH . N 4 HOH A 17 317 3 HOH HOH . N 4 HOH A 18 318 151 HOH HOH . N 4 HOH A 19 319 170 HOH HOH . N 4 HOH A 20 320 17 HOH HOH . N 4 HOH A 21 321 47 HOH HOH . N 4 HOH A 22 322 10 HOH HOH . N 4 HOH A 23 323 99 HOH HOH . N 4 HOH A 24 324 20 HOH HOH . N 4 HOH A 25 325 198 HOH HOH . N 4 HOH A 26 326 103 HOH HOH . N 4 HOH A 27 327 86 HOH HOH . N 4 HOH A 28 328 35 HOH HOH . N 4 HOH A 29 329 111 HOH HOH . N 4 HOH A 30 330 30 HOH HOH . N 4 HOH A 31 331 33 HOH HOH . N 4 HOH A 32 332 93 HOH HOH . N 4 HOH A 33 333 126 HOH HOH . N 4 HOH A 34 334 13 HOH HOH . N 4 HOH A 35 335 102 HOH HOH . N 4 HOH A 36 336 178 HOH HOH . N 4 HOH A 37 337 106 HOH HOH . N 4 HOH A 38 338 14 HOH HOH . N 4 HOH A 39 339 57 HOH HOH . N 4 HOH A 40 340 59 HOH HOH . N 4 HOH A 41 341 34 HOH HOH . N 4 HOH A 42 342 172 HOH HOH . N 4 HOH A 43 343 165 HOH HOH . N 4 HOH A 44 344 42 HOH HOH . N 4 HOH A 45 345 19 HOH HOH . N 4 HOH A 46 346 56 HOH HOH . N 4 HOH A 47 347 207 HOH HOH . N 4 HOH A 48 348 192 HOH HOH . N 4 HOH A 49 349 12 HOH HOH . N 4 HOH A 50 350 159 HOH HOH . N 4 HOH A 51 351 96 HOH HOH . N 4 HOH A 52 352 85 HOH HOH . N 4 HOH A 53 353 209 HOH HOH . N 4 HOH A 54 354 65 HOH HOH . N 4 HOH A 55 355 23 HOH HOH . N 4 HOH A 56 356 46 HOH HOH . N 4 HOH A 57 357 24 HOH HOH . N 4 HOH A 58 358 154 HOH HOH . N 4 HOH A 59 359 142 HOH HOH . N 4 HOH A 60 360 40 HOH HOH . N 4 HOH A 61 361 110 HOH HOH . N 4 HOH A 62 362 131 HOH HOH . N 4 HOH A 63 363 224 HOH HOH . N 4 HOH A 64 364 54 HOH HOH . N 4 HOH A 65 365 50 HOH HOH . N 4 HOH A 66 366 74 HOH HOH . N 4 HOH A 67 367 71 HOH HOH . N 4 HOH A 68 368 157 HOH HOH . N 4 HOH A 69 369 133 HOH HOH . N 4 HOH A 70 370 182 HOH HOH . N 4 HOH A 71 371 125 HOH HOH . N 4 HOH A 72 372 211 HOH HOH . N 4 HOH A 73 373 60 HOH HOH . N 4 HOH A 74 374 70 HOH HOH . N 4 HOH A 75 375 186 HOH HOH . N 4 HOH A 76 376 87 HOH HOH . N 4 HOH A 77 377 202 HOH HOH . N 4 HOH A 78 378 82 HOH HOH . N 4 HOH A 79 379 144 HOH HOH . N 4 HOH A 80 380 43 HOH HOH . N 4 HOH A 81 381 145 HOH HOH . N 4 HOH A 82 382 63 HOH HOH . N 4 HOH A 83 383 127 HOH HOH . N 4 HOH A 84 384 83 HOH HOH . N 4 HOH A 85 385 213 HOH HOH . N 4 HOH A 86 386 88 HOH HOH . N 4 HOH A 87 387 118 HOH HOH . N 4 HOH A 88 388 164 HOH HOH . N 4 HOH A 89 389 98 HOH HOH . N 4 HOH A 90 390 181 HOH HOH . N 4 HOH A 91 391 5 HOH HOH . N 4 HOH A 92 392 4 HOH HOH . N 4 HOH A 93 393 189 HOH HOH . N 4 HOH A 94 394 123 HOH HOH . N 4 HOH A 95 395 52 HOH HOH . N 4 HOH A 96 396 219 HOH HOH . N 4 HOH A 97 397 163 HOH HOH . N 4 HOH A 98 398 220 HOH HOH . N 4 HOH A 99 399 112 HOH HOH . N 4 HOH A 100 400 89 HOH HOH . N 4 HOH A 101 401 215 HOH HOH . N 4 HOH A 102 402 227 HOH HOH . N 4 HOH A 103 403 176 HOH HOH . N 4 HOH A 104 404 140 HOH HOH . N 4 HOH A 105 405 233 HOH HOH . N 4 HOH A 106 406 101 HOH HOH . N 4 HOH A 107 407 197 HOH HOH . N 4 HOH A 108 408 216 HOH HOH . N 4 HOH A 109 409 212 HOH HOH . N 4 HOH A 110 410 171 HOH HOH . N 4 HOH A 111 411 232 HOH HOH . N 4 HOH A 112 412 228 HOH HOH . N 4 HOH A 113 413 174 HOH HOH . N 4 HOH A 114 414 214 HOH HOH . N 4 HOH A 115 415 156 HOH HOH . N 4 HOH A 116 416 205 HOH HOH . N 4 HOH A 117 417 143 HOH HOH . N 4 HOH A 118 418 210 HOH HOH . N 4 HOH A 119 419 53 HOH HOH . N 4 HOH A 120 420 208 HOH HOH . N 4 HOH A 121 421 173 HOH HOH . N 4 HOH A 122 422 229 HOH HOH . N 4 HOH A 123 423 226 HOH HOH . N 4 HOH A 124 424 84 HOH HOH . N 4 HOH A 125 425 188 HOH HOH . O 4 HOH B 1 301 221 HOH HOH . O 4 HOH B 2 302 31 HOH HOH . O 4 HOH B 3 303 69 HOH HOH . O 4 HOH B 4 304 80 HOH HOH . O 4 HOH B 5 305 179 HOH HOH . O 4 HOH B 6 306 114 HOH HOH . O 4 HOH B 7 307 15 HOH HOH . O 4 HOH B 8 308 137 HOH HOH . O 4 HOH B 9 309 25 HOH HOH . O 4 HOH B 10 310 183 HOH HOH . O 4 HOH B 11 311 77 HOH HOH . O 4 HOH B 12 312 160 HOH HOH . O 4 HOH B 13 313 81 HOH HOH . O 4 HOH B 14 314 44 HOH HOH . O 4 HOH B 15 315 61 HOH HOH . O 4 HOH B 16 316 100 HOH HOH . O 4 HOH B 17 317 27 HOH HOH . O 4 HOH B 18 318 158 HOH HOH . O 4 HOH B 19 319 177 HOH HOH . O 4 HOH B 20 320 29 HOH HOH . O 4 HOH B 21 321 32 HOH HOH . O 4 HOH B 22 322 39 HOH HOH . O 4 HOH B 23 323 124 HOH HOH . O 4 HOH B 24 324 6 HOH HOH . O 4 HOH B 25 325 67 HOH HOH . O 4 HOH B 26 326 91 HOH HOH . O 4 HOH B 27 327 162 HOH HOH . O 4 HOH B 28 328 7 HOH HOH . O 4 HOH B 29 329 217 HOH HOH . O 4 HOH B 30 330 26 HOH HOH . O 4 HOH B 31 331 72 HOH HOH . O 4 HOH B 32 332 21 HOH HOH . O 4 HOH B 33 333 37 HOH HOH . O 4 HOH B 34 334 120 HOH HOH . O 4 HOH B 35 335 184 HOH HOH . O 4 HOH B 36 336 55 HOH HOH . O 4 HOH B 37 337 18 HOH HOH . O 4 HOH B 38 338 45 HOH HOH . O 4 HOH B 39 339 132 HOH HOH . O 4 HOH B 40 340 79 HOH HOH . O 4 HOH B 41 341 76 HOH HOH . O 4 HOH B 42 342 38 HOH HOH . O 4 HOH B 43 343 155 HOH HOH . O 4 HOH B 44 344 116 HOH HOH . O 4 HOH B 45 345 75 HOH HOH . O 4 HOH B 46 346 161 HOH HOH . O 4 HOH B 47 347 153 HOH HOH . O 4 HOH B 48 348 78 HOH HOH . O 4 HOH B 49 349 117 HOH HOH . O 4 HOH B 50 350 92 HOH HOH . O 4 HOH B 51 351 107 HOH HOH . O 4 HOH B 52 352 190 HOH HOH . O 4 HOH B 53 353 48 HOH HOH . O 4 HOH B 54 354 175 HOH HOH . O 4 HOH B 55 355 130 HOH HOH . O 4 HOH B 56 356 90 HOH HOH . O 4 HOH B 57 357 94 HOH HOH . O 4 HOH B 58 358 194 HOH HOH . O 4 HOH B 59 359 73 HOH HOH . O 4 HOH B 60 360 139 HOH HOH . O 4 HOH B 61 361 64 HOH HOH . O 4 HOH B 62 362 16 HOH HOH . O 4 HOH B 63 363 68 HOH HOH . O 4 HOH B 64 364 66 HOH HOH . O 4 HOH B 65 365 223 HOH HOH . O 4 HOH B 66 366 113 HOH HOH . O 4 HOH B 67 367 108 HOH HOH . O 4 HOH B 68 368 150 HOH HOH . O 4 HOH B 69 369 136 HOH HOH . O 4 HOH B 70 370 218 HOH HOH . O 4 HOH B 71 371 201 HOH HOH . O 4 HOH B 72 372 104 HOH HOH . O 4 HOH B 73 373 196 HOH HOH . O 4 HOH B 74 374 200 HOH HOH . O 4 HOH B 75 375 97 HOH HOH . O 4 HOH B 76 376 147 HOH HOH . O 4 HOH B 77 377 152 HOH HOH . O 4 HOH B 78 378 199 HOH HOH . O 4 HOH B 79 379 121 HOH HOH . O 4 HOH B 80 380 28 HOH HOH . O 4 HOH B 81 381 115 HOH HOH . O 4 HOH B 82 382 203 HOH HOH . O 4 HOH B 83 383 204 HOH HOH . O 4 HOH B 84 384 185 HOH HOH . O 4 HOH B 85 385 234 HOH HOH . O 4 HOH B 86 386 206 HOH HOH . O 4 HOH B 87 387 134 HOH HOH . O 4 HOH B 88 388 169 HOH HOH . O 4 HOH B 89 389 138 HOH HOH . O 4 HOH B 90 390 135 HOH HOH . O 4 HOH B 91 391 141 HOH HOH . O 4 HOH B 92 392 168 HOH HOH . O 4 HOH B 93 393 129 HOH HOH . O 4 HOH B 94 394 166 HOH HOH . O 4 HOH B 95 395 230 HOH HOH . O 4 HOH B 96 396 222 HOH HOH . O 4 HOH B 97 397 195 HOH HOH . O 4 HOH B 98 398 146 HOH HOH . O 4 HOH B 99 399 109 HOH HOH . O 4 HOH B 100 400 167 HOH HOH . O 4 HOH B 101 401 180 HOH HOH . O 4 HOH B 102 402 231 HOH HOH . O 4 HOH B 103 403 148 HOH HOH . O 4 HOH B 104 404 225 HOH HOH . O 4 HOH B 105 405 193 HOH HOH . O 4 HOH B 106 406 191 HOH HOH . O 4 HOH B 107 407 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BM0 . . . H 3 64.153 22.992 18.585 0.36 32.42 ? C1 BM0 206 A 1 HETATM 2 C C2 BM0 . . . H 3 63.787 22.029 17.479 0.48 33.04 ? C2 BM0 206 A 1 HETATM 3 C C3 BM0 . . . H 3 64.317 22.546 16.163 0.81 33.93 ? C3 BM0 206 A 1 HETATM 4 C C4 BM0 . . . H 3 65.305 21.24 14.137 0.66 29.6 ? C4 BM0 206 A 1 HETATM 5 C C5 BM0 . . . H 3 64.928 20.086 13.422 0.92 28.24 ? C5 BM0 206 A 1 HETATM 6 C C6 BM0 . . . H 3 63.375 20.423 15.063 0.44 31.55 ? C6 BM0 206 A 1 HETATM 7 C C7 BM0 . . . H 3 63.001 18.406 13.568 0.86 31.13 ? C7 BM0 206 A 1 HETATM 8 N N1 BM0 . . . H 3 63.726 19.58 14.001 0.45 29.36 ? N1 BM0 206 A 1 HETATM 9 N N BM0 . . . H 3 64.322 21.466 15.186 0.85 32.21 ? N BM0 206 A 1 HETATM 10 C C BM0 . . . H 3 64.115 22.277 19.905 0.6 32.29 ? C BM0 206 A 1 HETATM 11 H H4 BM0 . . . H 3 65.048 23.332 18.432 0.36 38.82 ? H4 BM0 206 A 1 HETATM 12 H H3 BM0 . . . H 3 63.524 23.73 18.595 0.36 38.82 ? H3 BM0 206 A 1 HETATM 13 H H5 BM0 . . . H 3 64.189 21.166 17.665 0.48 39.56 ? H5 BM0 206 A 1 HETATM 14 H H6 BM0 . . . H 3 62.823 21.933 17.431 0.48 39.56 ? H6 BM0 206 A 1 HETATM 15 H H8 BM0 . . . H 3 65.226 22.858 16.291 0.81 40.64 ? H8 BM0 206 A 1 HETATM 16 H H7 BM0 . . . H 3 63.768 23.279 15.845 0.81 40.64 ? H7 BM0 206 A 1 HETATM 17 H H9 BM0 . . . H 3 66.085 21.789 13.96 0.66 35.44 ? H9 BM0 206 A 1 HETATM 18 H H10 BM0 . . . H 3 65.403 19.702 12.668 0.92 33.8 ? H10 BM0 206 A 1 HETATM 19 H H11 BM0 . . . H 3 62.596 20.309 15.63 0.44 37.78 ? H11 BM0 206 A 1 HETATM 20 H H13 BM0 . . . H 3 62.341 18.174 14.24 0.86 37.28 ? H13 BM0 206 A 1 HETATM 21 H H14 BM0 . . . H 3 62.552 18.59 12.728 0.86 37.28 ? H14 BM0 206 A 1 HETATM 22 H H12 BM0 . . . H 3 63.618 17.665 13.46 0.86 37.28 ? H12 BM0 206 A 1 HETATM 23 H H BM0 . . . H 3 64.32 22.903 20.618 0.6 38.67 ? H BM0 206 A 1 HETATM 24 H H2 BM0 . . . H 3 63.23 21.905 20.046 0.6 38.67 ? H2 BM0 206 A 1 HETATM 25 H H1 BM0 . . . H 3 64.77 21.562 19.904 0.6 38.67 ? H1 BM0 206 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 25 #