data_5CTG # _model_server_result.job_id aNXXwWsTEZZLyD_v2UGAoA _model_server_result.datetime_utc '2024-11-23 16:43:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ctg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":303}' # _entry.id 5CTG # _exptl.entry_id 5CTG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.36 _cell.angle_gamma 90 _cell.entry_id 5CTG _cell.length_a 51.83 _cell.length_b 142.24 _cell.length_c 81.57 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CTG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N ? 4 I N N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 447 n n C C2 TRS sing 448 n n C C3 TRS sing 449 n n C N TRS sing 450 n n C1 O1 TRS sing 451 n n C1 H11 TRS sing 452 n n C1 H12 TRS sing 453 n n C2 O2 TRS sing 454 n n C2 H21 TRS sing 455 n n C2 H22 TRS sing 456 n n C3 O3 TRS sing 457 n n C3 H31 TRS sing 458 n n C3 H32 TRS sing 459 n n N HN1 TRS sing 460 n n N HN2 TRS sing 461 n n N HN3 TRS sing 462 n n O1 HO1 TRS sing 463 n n O2 HO2 TRS sing 464 n n O3 HO3 TRS sing 465 n n # _atom_sites.entry_id 5CTG _atom_sites.fract_transf_matrix[1][1] 0.019294 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001133 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00703 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PE5 A 1 301 302 PE5 PE5 . E 3 BNG A 1 302 802 BNG BNG . F 4 TRS A 1 303 1 TRS TRS . G 2 PE5 B 1 301 301 PE5 PE5 . H 4 TRS B 1 302 3 TRS TRS . I 4 TRS C 1 301 2 TRS TRS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . F 4 -29.98 -5.766 -18.021 1 107.94 ? C TRS 303 A 1 HETATM 2 C C1 TRS . . . F 4 -30.255 -6.935 -18.966 1 113.36 ? C1 TRS 303 A 1 HETATM 3 C C2 TRS . . . F 4 -31.24 -5.302 -17.305 1 102.94 ? C2 TRS 303 A 1 HETATM 4 C C3 TRS . . . F 4 -29.422 -4.581 -18.806 1 117.02 ? C3 TRS 303 A 1 HETATM 5 N N TRS . . . F 4 -29.019 -6.198 -17.007 1 98.67 ? N TRS 303 A 1 HETATM 6 O O1 TRS . . . F 4 -29.075 -7.279 -19.659 1 115 ? O1 TRS 303 A 1 HETATM 7 O O2 TRS . . . F 4 -31.032 -3.965 -16.903 1 86.18 ? O2 TRS 303 A 1 HETATM 8 O O3 TRS . . . F 4 -30.242 -4.273 -19.911 1 117.37 ? O3 TRS 303 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 8 #