data_5CUD # _model_server_result.job_id xnOXwTgd7aqn2JrZyhb7BQ _model_server_result.datetime_utc '2024-11-24 06:28:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cud # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2002}' # _entry.id 5CUD # _exptl.entry_id 5CUD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.557 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-chloro-9H-purine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CUD _cell.length_a 82.011 _cell.length_b 96.724 _cell.length_c 57.843 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CUD _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H3 Cl N4' _chem_comp.formula_weight 154.557 _chem_comp.id ES4 _chem_comp.mon_nstd_flag . _chem_comp.name 6-chloro-9H-purine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C02 ES4 doub 92 n y C10 C06 ES4 sing 93 n y C10 N09 ES4 sing 94 n y CL01 C02 ES4 sing 95 n n C02 N03 ES4 sing 96 n y N03 C04 ES4 doub 97 n y C04 N05 ES4 sing 98 n y N05 C06 ES4 doub 99 n y C06 N07 ES4 sing 100 n y N07 C08 ES4 sing 101 n y C08 N09 ES4 doub 102 n y C04 H04 ES4 sing 103 n n N07 HN07 ES4 sing 104 n n C08 H08 ES4 sing 105 n n # _atom_sites.entry_id 5CUD _atom_sites.fract_transf_matrix[1][1] 0.012193 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010339 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 2001 1 EDO EDO . C 3 ES4 A 1 2002 1 ES4 LIG . D 4 HOH A 1 2101 18 HOH HOH . D 4 HOH A 2 2102 119 HOH HOH . D 4 HOH A 3 2103 85 HOH HOH . D 4 HOH A 4 2104 118 HOH HOH . D 4 HOH A 5 2105 128 HOH HOH . D 4 HOH A 6 2106 35 HOH HOH . D 4 HOH A 7 2107 32 HOH HOH . D 4 HOH A 8 2108 41 HOH HOH . D 4 HOH A 9 2109 45 HOH HOH . D 4 HOH A 10 2110 124 HOH HOH . D 4 HOH A 11 2111 39 HOH HOH . D 4 HOH A 12 2112 86 HOH HOH . D 4 HOH A 13 2113 96 HOH HOH . D 4 HOH A 14 2114 42 HOH HOH . D 4 HOH A 15 2115 134 HOH HOH . D 4 HOH A 16 2116 22 HOH HOH . D 4 HOH A 17 2117 43 HOH HOH . D 4 HOH A 18 2118 83 HOH HOH . D 4 HOH A 19 2119 33 HOH HOH . D 4 HOH A 20 2120 68 HOH HOH . D 4 HOH A 21 2121 17 HOH HOH . D 4 HOH A 22 2122 67 HOH HOH . D 4 HOH A 23 2123 46 HOH HOH . D 4 HOH A 24 2124 34 HOH HOH . D 4 HOH A 25 2125 6 HOH HOH . D 4 HOH A 26 2126 8 HOH HOH . D 4 HOH A 27 2127 65 HOH HOH . D 4 HOH A 28 2128 50 HOH HOH . D 4 HOH A 29 2129 57 HOH HOH . D 4 HOH A 30 2130 12 HOH HOH . D 4 HOH A 31 2131 91 HOH HOH . D 4 HOH A 32 2132 129 HOH HOH . D 4 HOH A 33 2133 40 HOH HOH . D 4 HOH A 34 2134 66 HOH HOH . D 4 HOH A 35 2135 13 HOH HOH . D 4 HOH A 36 2136 9 HOH HOH . D 4 HOH A 37 2137 88 HOH HOH . D 4 HOH A 38 2138 90 HOH HOH . D 4 HOH A 39 2139 2 HOH HOH . D 4 HOH A 40 2140 28 HOH HOH . D 4 HOH A 41 2141 75 HOH HOH . D 4 HOH A 42 2142 77 HOH HOH . D 4 HOH A 43 2143 73 HOH HOH . D 4 HOH A 44 2144 94 HOH HOH . D 4 HOH A 45 2145 127 HOH HOH . D 4 HOH A 46 2146 16 HOH HOH . D 4 HOH A 47 2147 48 HOH HOH . D 4 HOH A 48 2148 63 HOH HOH . D 4 HOH A 49 2149 23 HOH HOH . D 4 HOH A 50 2150 92 HOH HOH . D 4 HOH A 51 2151 14 HOH HOH . D 4 HOH A 52 2152 53 HOH HOH . D 4 HOH A 53 2153 21 HOH HOH . D 4 HOH A 54 2154 30 HOH HOH . D 4 HOH A 55 2155 15 HOH HOH . D 4 HOH A 56 2156 1 HOH HOH . D 4 HOH A 57 2157 19 HOH HOH . D 4 HOH A 58 2158 47 HOH HOH . D 4 HOH A 59 2159 4 HOH HOH . D 4 HOH A 60 2160 74 HOH HOH . D 4 HOH A 61 2161 26 HOH HOH . D 4 HOH A 62 2162 135 HOH HOH . D 4 HOH A 63 2163 11 HOH HOH . D 4 HOH A 64 2164 24 HOH HOH . D 4 HOH A 65 2165 132 HOH HOH . D 4 HOH A 66 2166 78 HOH HOH . D 4 HOH A 67 2167 55 HOH HOH . D 4 HOH A 68 2168 80 HOH HOH . D 4 HOH A 69 2169 84 HOH HOH . D 4 HOH A 70 2170 89 HOH HOH . D 4 HOH A 71 2171 69 HOH HOH . D 4 HOH A 72 2172 20 HOH HOH . D 4 HOH A 73 2173 97 HOH HOH . D 4 HOH A 74 2174 87 HOH HOH . D 4 HOH A 75 2175 82 HOH HOH . D 4 HOH A 76 2176 5 HOH HOH . D 4 HOH A 77 2177 70 HOH HOH . D 4 HOH A 78 2178 31 HOH HOH . D 4 HOH A 79 2179 36 HOH HOH . D 4 HOH A 80 2180 102 HOH HOH . D 4 HOH A 81 2181 100 HOH HOH . D 4 HOH A 82 2182 49 HOH HOH . D 4 HOH A 83 2183 7 HOH HOH . D 4 HOH A 84 2184 25 HOH HOH . D 4 HOH A 85 2185 58 HOH HOH . D 4 HOH A 86 2186 123 HOH HOH . D 4 HOH A 87 2187 105 HOH HOH . D 4 HOH A 88 2188 122 HOH HOH . D 4 HOH A 89 2189 60 HOH HOH . D 4 HOH A 90 2190 52 HOH HOH . D 4 HOH A 91 2191 98 HOH HOH . D 4 HOH A 92 2192 131 HOH HOH . D 4 HOH A 93 2193 59 HOH HOH . D 4 HOH A 94 2194 76 HOH HOH . D 4 HOH A 95 2195 3 HOH HOH . D 4 HOH A 96 2196 29 HOH HOH . D 4 HOH A 97 2197 10 HOH HOH . D 4 HOH A 98 2198 93 HOH HOH . D 4 HOH A 99 2199 117 HOH HOH . D 4 HOH A 100 2200 136 HOH HOH . D 4 HOH A 101 2201 64 HOH HOH . D 4 HOH A 102 2202 126 HOH HOH . D 4 HOH A 103 2203 103 HOH HOH . D 4 HOH A 104 2204 112 HOH HOH . D 4 HOH A 105 2205 108 HOH HOH . D 4 HOH A 106 2206 133 HOH HOH . D 4 HOH A 107 2207 38 HOH HOH . D 4 HOH A 108 2208 125 HOH HOH . D 4 HOH A 109 2209 114 HOH HOH . D 4 HOH A 110 2210 61 HOH HOH . D 4 HOH A 111 2211 130 HOH HOH . D 4 HOH A 112 2212 121 HOH HOH . D 4 HOH A 113 2213 27 HOH HOH . D 4 HOH A 114 2214 109 HOH HOH . D 4 HOH A 115 2215 106 HOH HOH . D 4 HOH A 116 2216 99 HOH HOH . D 4 HOH A 117 2217 115 HOH HOH . D 4 HOH A 118 2218 107 HOH HOH . D 4 HOH A 119 2219 44 HOH HOH . D 4 HOH A 120 2220 56 HOH HOH . D 4 HOH A 121 2221 120 HOH HOH . D 4 HOH A 122 2222 54 HOH HOH . D 4 HOH A 123 2223 79 HOH HOH . D 4 HOH A 124 2224 101 HOH HOH . D 4 HOH A 125 2225 95 HOH HOH . D 4 HOH A 126 2226 72 HOH HOH . D 4 HOH A 127 2227 37 HOH HOH . D 4 HOH A 128 2228 111 HOH HOH . D 4 HOH A 129 2229 116 HOH HOH . D 4 HOH A 130 2230 81 HOH HOH . D 4 HOH A 131 2231 51 HOH HOH . D 4 HOH A 132 2232 71 HOH HOH . D 4 HOH A 133 2233 113 HOH HOH . D 4 HOH A 134 2234 104 HOH HOH . D 4 HOH A 135 2235 62 HOH HOH . D 4 HOH A 136 2236 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 ES4 . . . C 3 13.815 39.227 29.494 0.74 42.81 ? C10 ES4 2002 A 1 HETATM 2 CL CL01 ES4 . . . C 3 11.531 38.037 28.532 0.74 59.06 ? CL01 ES4 2002 A 1 HETATM 3 C C02 ES4 . . . C 3 12.443 39.4 29.155 0.74 46.27 ? C02 ES4 2002 A 1 HETATM 4 N N03 ES4 . . . C 3 11.876 40.617 29.324 0.74 47.06 ? N03 ES4 2002 A 1 HETATM 5 C C04 ES4 . . . C 3 12.603 41.657 29.811 0.74 43.07 ? C04 ES4 2002 A 1 HETATM 6 N N05 ES4 . . . C 3 13.904 41.503 30.133 0.74 41.46 ? N05 ES4 2002 A 1 HETATM 7 C C06 ES4 . . . C 3 14.541 40.288 29.979 0.74 41.2 ? C06 ES4 2002 A 1 HETATM 8 N N07 ES4 . . . C 3 15.817 39.826 30.216 0.74 35.65 ? N07 ES4 2002 A 1 HETATM 9 C C08 ES4 . . . C 3 15.866 38.522 29.883 0.74 37.34 ? C08 ES4 2002 A 1 HETATM 10 N N09 ES4 . . . C 3 14.66 38.135 29.442 0.74 39.55 ? N09 ES4 2002 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #