data_5CUU # _model_server_result.job_id TtoDtj_dg9v1GIVVu9E2nA _model_server_result.datetime_utc '2024-11-22 19:29:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cuu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":901}' # _entry.id 5CUU # _exptl.entry_id 5CUU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 134.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MALATE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CUU _cell.length_a 100.775 _cell.length_b 102.63 _cell.length_c 158.834 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CUU _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N # _chem_comp.formula 'C4 H6 O5' _chem_comp.formula_weight 134.087 _chem_comp.id MLT _chem_comp.mon_nstd_flag . _chem_comp.name D-MALATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2R)-2-HYDROXYBUTANEDIOIC ACID;2-HYDROXY-SUCCINIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MLT doub 276 n n C1 O2 MLT sing 277 n n C1 C2 MLT sing 278 n n C2 O3 MLT sing 279 n n C2 C3 MLT sing 280 n n C2 H2 MLT sing 281 n n O3 HO3 MLT sing 282 n n C3 C4 MLT sing 283 n n C3 H31 MLT sing 284 n n C3 H32 MLT sing 285 n n C4 O4 MLT doub 286 n n C4 O5 MLT sing 287 n n O5 HO5 MLT sing 288 n n O2 H6 MLT sing 289 n n # _atom_sites.entry_id 5CUU _atom_sites.fract_transf_matrix[1][1] 0.009923 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MLT A 1 901 901 MLT MLT . D 2 MLT A 1 902 902 MLT MLT . E 3 4GA A 1 903 900 4GA DRG . F 4 MG A 1 904 903 MG MG . G 2 MLT B 1 901 901 MLT MLT . H 3 4GA B 1 902 900 4GA DRG . I 4 MG B 1 903 903 MG MG . J 5 HOH A 1 1001 22 HOH HOH . J 5 HOH A 2 1002 118 HOH HOH . J 5 HOH A 3 1003 92 HOH HOH . J 5 HOH A 4 1004 67 HOH HOH . J 5 HOH A 5 1005 57 HOH HOH . J 5 HOH A 6 1006 58 HOH HOH . J 5 HOH A 7 1007 42 HOH HOH . J 5 HOH A 8 1008 20 HOH HOH . J 5 HOH A 9 1009 63 HOH HOH . J 5 HOH A 10 1010 110 HOH HOH . J 5 HOH A 11 1011 43 HOH HOH . J 5 HOH A 12 1012 1 HOH HOH . J 5 HOH A 13 1013 45 HOH HOH . J 5 HOH A 14 1014 82 HOH HOH . J 5 HOH A 15 1015 9 HOH HOH . J 5 HOH A 16 1016 2 HOH HOH . J 5 HOH A 17 1017 15 HOH HOH . J 5 HOH A 18 1018 108 HOH HOH . J 5 HOH A 19 1019 56 HOH HOH . J 5 HOH A 20 1020 59 HOH HOH . J 5 HOH A 21 1021 65 HOH HOH . J 5 HOH A 22 1022 4 HOH HOH . J 5 HOH A 23 1023 31 HOH HOH . J 5 HOH A 24 1024 10 HOH HOH . J 5 HOH A 25 1025 83 HOH HOH . J 5 HOH A 26 1026 21 HOH HOH . J 5 HOH A 27 1027 66 HOH HOH . J 5 HOH A 28 1028 84 HOH HOH . J 5 HOH A 29 1029 41 HOH HOH . J 5 HOH A 30 1030 26 HOH HOH . J 5 HOH A 31 1031 64 HOH HOH . J 5 HOH A 32 1032 107 HOH HOH . J 5 HOH A 33 1033 44 HOH HOH . J 5 HOH A 34 1034 61 HOH HOH . J 5 HOH A 35 1035 27 HOH HOH . J 5 HOH A 36 1036 30 HOH HOH . J 5 HOH A 37 1037 117 HOH HOH . J 5 HOH A 38 1038 60 HOH HOH . J 5 HOH A 39 1039 49 HOH HOH . J 5 HOH A 40 1040 103 HOH HOH . J 5 HOH A 41 1041 80 HOH HOH . J 5 HOH A 42 1042 40 HOH HOH . J 5 HOH A 43 1043 28 HOH HOH . J 5 HOH A 44 1044 109 HOH HOH . J 5 HOH A 45 1045 72 HOH HOH . J 5 HOH A 46 1046 70 HOH HOH . J 5 HOH A 47 1047 62 HOH HOH . J 5 HOH A 48 1048 50 HOH HOH . J 5 HOH A 49 1049 36 HOH HOH . J 5 HOH A 50 1050 93 HOH HOH . J 5 HOH A 51 1051 68 HOH HOH . J 5 HOH A 52 1052 11 HOH HOH . J 5 HOH A 53 1053 95 HOH HOH . J 5 HOH A 54 1054 124 HOH HOH . J 5 HOH A 55 1055 48 HOH HOH . J 5 HOH A 56 1056 79 HOH HOH . J 5 HOH A 57 1057 96 HOH HOH . J 5 HOH A 58 1058 46 HOH HOH . J 5 HOH A 59 1059 94 HOH HOH . J 5 HOH A 60 1060 69 HOH HOH . J 5 HOH A 61 1061 71 HOH HOH . J 5 HOH A 62 1062 34 HOH HOH . J 5 HOH A 63 1063 47 HOH HOH . J 5 HOH A 64 1064 25 HOH HOH . J 5 HOH A 65 1065 105 HOH HOH . J 5 HOH A 66 1066 35 HOH HOH . J 5 HOH A 67 1067 3 HOH HOH . J 5 HOH A 68 1068 32 HOH HOH . J 5 HOH A 69 1069 91 HOH HOH . J 5 HOH A 70 1070 85 HOH HOH . K 5 HOH B 1 1001 120 HOH HOH . K 5 HOH B 2 1002 123 HOH HOH . K 5 HOH B 3 1003 8 HOH HOH . K 5 HOH B 4 1004 77 HOH HOH . K 5 HOH B 5 1005 37 HOH HOH . K 5 HOH B 6 1006 54 HOH HOH . K 5 HOH B 7 1007 55 HOH HOH . K 5 HOH B 8 1008 115 HOH HOH . K 5 HOH B 9 1009 53 HOH HOH . K 5 HOH B 10 1010 12 HOH HOH . K 5 HOH B 11 1011 5 HOH HOH . K 5 HOH B 12 1012 17 HOH HOH . K 5 HOH B 13 1013 23 HOH HOH . K 5 HOH B 14 1014 101 HOH HOH . K 5 HOH B 15 1015 116 HOH HOH . K 5 HOH B 16 1016 119 HOH HOH . K 5 HOH B 17 1017 76 HOH HOH . K 5 HOH B 18 1018 121 HOH HOH . K 5 HOH B 19 1019 14 HOH HOH . K 5 HOH B 20 1020 97 HOH HOH . K 5 HOH B 21 1021 18 HOH HOH . K 5 HOH B 22 1022 7 HOH HOH . K 5 HOH B 23 1023 51 HOH HOH . K 5 HOH B 24 1024 114 HOH HOH . K 5 HOH B 25 1025 13 HOH HOH . K 5 HOH B 26 1026 39 HOH HOH . K 5 HOH B 27 1027 98 HOH HOH . K 5 HOH B 28 1028 102 HOH HOH . K 5 HOH B 29 1029 19 HOH HOH . K 5 HOH B 30 1030 33 HOH HOH . K 5 HOH B 31 1031 81 HOH HOH . K 5 HOH B 32 1032 122 HOH HOH . K 5 HOH B 33 1033 38 HOH HOH . K 5 HOH B 34 1034 113 HOH HOH . K 5 HOH B 35 1035 6 HOH HOH . K 5 HOH B 36 1036 111 HOH HOH . K 5 HOH B 37 1037 73 HOH HOH . K 5 HOH B 38 1038 89 HOH HOH . K 5 HOH B 39 1039 16 HOH HOH . K 5 HOH B 40 1040 24 HOH HOH . K 5 HOH B 41 1041 86 HOH HOH . K 5 HOH B 42 1042 87 HOH HOH . K 5 HOH B 43 1043 74 HOH HOH . K 5 HOH B 44 1044 29 HOH HOH . K 5 HOH B 45 1045 52 HOH HOH . K 5 HOH B 46 1046 104 HOH HOH . K 5 HOH B 47 1047 78 HOH HOH . K 5 HOH B 48 1048 112 HOH HOH . K 5 HOH B 49 1049 75 HOH HOH . K 5 HOH B 50 1050 88 HOH HOH . K 5 HOH B 51 1051 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLT . . . G 2 -5.569 0.272 -17.649 1 82.56 ? C1 MLT 901 B 1 HETATM 2 O O1 MLT . . . G 2 -4.688 0.092 -18.472 1 85.17 ? O1 MLT 901 B 1 HETATM 3 O O2 MLT . . . G 2 -6.552 0.937 -17.988 1 84.85 ? O2 MLT 901 B 1 HETATM 4 C C2 MLT . . . G 2 -5.442 -0.331 -16.232 1 79.78 ? C2 MLT 901 B 1 HETATM 5 O O3 MLT . . . G 2 -6.574 -0.013 -15.404 1 77.86 ? O3 MLT 901 B 1 HETATM 6 C C3 MLT . . . G 2 -4.146 0.156 -15.55 1 78.25 ? C3 MLT 901 B 1 HETATM 7 C C4 MLT . . . G 2 -3.992 -0.423 -14.147 1 78.03 ? C4 MLT 901 B 1 HETATM 8 O O4 MLT . . . G 2 -4.82 -1.152 -13.703 1 78.7 ? O4 MLT 901 B 1 HETATM 9 O O5 MLT . . . G 2 -2.923 -0.128 -13.389 1 77.06 ? O5 MLT 901 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #