data_5CUU
#
_model_server_result.job_id            N98byYBSqxbV_lwGgHYFFQ 
_model_server_result.datetime_utc      '2024-11-22 19:23:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cuu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":902}' 
#
_entry.id    5CUU 
#
_exptl.entry_id    5CUU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              329.204 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-butyl-3-(2-hydroxy-2,2-diphosphonoethyl)-1H-imidazol-3-ium 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CUU 
_cell.length_a            100.775 
_cell.length_b            102.63 
_cell.length_c            158.834 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CUU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
#
_chem_comp.formula           'C9 H19 N2 O7 P2 1' 
_chem_comp.formula_weight    329.204 
_chem_comp.id                4GA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-butyl-3-(2-hydroxy-2,2-diphosphonoethyl)-1H-imidazol-3-ium 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CAL 4GA sing 1 n n 
CAA HAA 4GA sing 2 n n 
CAA HAAA 4GA sing 3 n n 
CAA HAAB 4GA sing 4 n n 
OAB PAS 4GA sing 5 n n 
OAB HOAB 4GA sing 6 n n 
OAC HOAC 4GA sing 7 n n 
OAD HOAD 4GA sing 8 n n 
OAE HOAE 4GA sing 9 n n 
OAF PAS 4GA doub 10 n n 
OAG HOAG 4GA sing 11 n n 
OAH PAT 4GA doub 12 n n 
CAI NAP 4GA sing 13 n y 
CAI HAI 4GA sing 14 n n 
CAJ CAI 4GA doub 15 n y 
CAJ NAQ 4GA sing 16 n y 
CAJ HAJ 4GA sing 17 n n 
CAK HAK 4GA sing 18 n n 
CAL CAM 4GA sing 19 n n 
CAL HAL 4GA sing 20 n n 
CAL HALA 4GA sing 21 n n 
CAM CAN 4GA sing 22 n n 
CAM HAM 4GA sing 23 n n 
CAM HAMA 4GA sing 24 n n 
CAN HAN 4GA sing 25 n n 
CAN HANA 4GA sing 26 n n 
CAO CAR 4GA sing 27 n n 
CAO HAO 4GA sing 28 n n 
CAO HAOA 4GA sing 29 n n 
NAP CAK 4GA sing 30 n y 
NAP CAN 4GA sing 31 n n 
NAQ CAK 4GA doub 32 n y 
NAQ CAO 4GA sing 33 n n 
CAR OAD 4GA sing 34 n n 
CAR PAT 4GA sing 35 n n 
PAS OAE 4GA sing 36 n n 
PAS CAR 4GA sing 37 n n 
PAT OAC 4GA sing 38 n n 
PAT OAG 4GA sing 39 n n 
#
_atom_sites.entry_id                     5CUU 
_atom_sites.fract_transf_matrix[1][1]    0.009923 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009744 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006296 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MLT A 1 901 901 MLT MLT . 
D 2 MLT A 1 902 902 MLT MLT . 
E 3 4GA A 1 903 900 4GA DRG . 
F 4 MG A 1 904 903 MG MG . 
G 2 MLT B 1 901 901 MLT MLT . 
H 3 4GA B 1 902 900 4GA DRG . 
I 4 MG B 1 903 903 MG MG . 
J 5 HOH A 1 1001 22 HOH HOH . 
J 5 HOH A 2 1002 118 HOH HOH . 
J 5 HOH A 3 1003 92 HOH HOH . 
J 5 HOH A 4 1004 67 HOH HOH . 
J 5 HOH A 5 1005 57 HOH HOH . 
J 5 HOH A 6 1006 58 HOH HOH . 
J 5 HOH A 7 1007 42 HOH HOH . 
J 5 HOH A 8 1008 20 HOH HOH . 
J 5 HOH A 9 1009 63 HOH HOH . 
J 5 HOH A 10 1010 110 HOH HOH . 
J 5 HOH A 11 1011 43 HOH HOH . 
J 5 HOH A 12 1012 1 HOH HOH . 
J 5 HOH A 13 1013 45 HOH HOH . 
J 5 HOH A 14 1014 82 HOH HOH . 
J 5 HOH A 15 1015 9 HOH HOH . 
J 5 HOH A 16 1016 2 HOH HOH . 
J 5 HOH A 17 1017 15 HOH HOH . 
J 5 HOH A 18 1018 108 HOH HOH . 
J 5 HOH A 19 1019 56 HOH HOH . 
J 5 HOH A 20 1020 59 HOH HOH . 
J 5 HOH A 21 1021 65 HOH HOH . 
J 5 HOH A 22 1022 4 HOH HOH . 
J 5 HOH A 23 1023 31 HOH HOH . 
J 5 HOH A 24 1024 10 HOH HOH . 
J 5 HOH A 25 1025 83 HOH HOH . 
J 5 HOH A 26 1026 21 HOH HOH . 
J 5 HOH A 27 1027 66 HOH HOH . 
J 5 HOH A 28 1028 84 HOH HOH . 
J 5 HOH A 29 1029 41 HOH HOH . 
J 5 HOH A 30 1030 26 HOH HOH . 
J 5 HOH A 31 1031 64 HOH HOH . 
J 5 HOH A 32 1032 107 HOH HOH . 
J 5 HOH A 33 1033 44 HOH HOH . 
J 5 HOH A 34 1034 61 HOH HOH . 
J 5 HOH A 35 1035 27 HOH HOH . 
J 5 HOH A 36 1036 30 HOH HOH . 
J 5 HOH A 37 1037 117 HOH HOH . 
J 5 HOH A 38 1038 60 HOH HOH . 
J 5 HOH A 39 1039 49 HOH HOH . 
J 5 HOH A 40 1040 103 HOH HOH . 
J 5 HOH A 41 1041 80 HOH HOH . 
J 5 HOH A 42 1042 40 HOH HOH . 
J 5 HOH A 43 1043 28 HOH HOH . 
J 5 HOH A 44 1044 109 HOH HOH . 
J 5 HOH A 45 1045 72 HOH HOH . 
J 5 HOH A 46 1046 70 HOH HOH . 
J 5 HOH A 47 1047 62 HOH HOH . 
J 5 HOH A 48 1048 50 HOH HOH . 
J 5 HOH A 49 1049 36 HOH HOH . 
J 5 HOH A 50 1050 93 HOH HOH . 
J 5 HOH A 51 1051 68 HOH HOH . 
J 5 HOH A 52 1052 11 HOH HOH . 
J 5 HOH A 53 1053 95 HOH HOH . 
J 5 HOH A 54 1054 124 HOH HOH . 
J 5 HOH A 55 1055 48 HOH HOH . 
J 5 HOH A 56 1056 79 HOH HOH . 
J 5 HOH A 57 1057 96 HOH HOH . 
J 5 HOH A 58 1058 46 HOH HOH . 
J 5 HOH A 59 1059 94 HOH HOH . 
J 5 HOH A 60 1060 69 HOH HOH . 
J 5 HOH A 61 1061 71 HOH HOH . 
J 5 HOH A 62 1062 34 HOH HOH . 
J 5 HOH A 63 1063 47 HOH HOH . 
J 5 HOH A 64 1064 25 HOH HOH . 
J 5 HOH A 65 1065 105 HOH HOH . 
J 5 HOH A 66 1066 35 HOH HOH . 
J 5 HOH A 67 1067 3 HOH HOH . 
J 5 HOH A 68 1068 32 HOH HOH . 
J 5 HOH A 69 1069 91 HOH HOH . 
J 5 HOH A 70 1070 85 HOH HOH . 
K 5 HOH B 1 1001 120 HOH HOH . 
K 5 HOH B 2 1002 123 HOH HOH . 
K 5 HOH B 3 1003 8 HOH HOH . 
K 5 HOH B 4 1004 77 HOH HOH . 
K 5 HOH B 5 1005 37 HOH HOH . 
K 5 HOH B 6 1006 54 HOH HOH . 
K 5 HOH B 7 1007 55 HOH HOH . 
K 5 HOH B 8 1008 115 HOH HOH . 
K 5 HOH B 9 1009 53 HOH HOH . 
K 5 HOH B 10 1010 12 HOH HOH . 
K 5 HOH B 11 1011 5 HOH HOH . 
K 5 HOH B 12 1012 17 HOH HOH . 
K 5 HOH B 13 1013 23 HOH HOH . 
K 5 HOH B 14 1014 101 HOH HOH . 
K 5 HOH B 15 1015 116 HOH HOH . 
K 5 HOH B 16 1016 119 HOH HOH . 
K 5 HOH B 17 1017 76 HOH HOH . 
K 5 HOH B 18 1018 121 HOH HOH . 
K 5 HOH B 19 1019 14 HOH HOH . 
K 5 HOH B 20 1020 97 HOH HOH . 
K 5 HOH B 21 1021 18 HOH HOH . 
K 5 HOH B 22 1022 7 HOH HOH . 
K 5 HOH B 23 1023 51 HOH HOH . 
K 5 HOH B 24 1024 114 HOH HOH . 
K 5 HOH B 25 1025 13 HOH HOH . 
K 5 HOH B 26 1026 39 HOH HOH . 
K 5 HOH B 27 1027 98 HOH HOH . 
K 5 HOH B 28 1028 102 HOH HOH . 
K 5 HOH B 29 1029 19 HOH HOH . 
K 5 HOH B 30 1030 33 HOH HOH . 
K 5 HOH B 31 1031 81 HOH HOH . 
K 5 HOH B 32 1032 122 HOH HOH . 
K 5 HOH B 33 1033 38 HOH HOH . 
K 5 HOH B 34 1034 113 HOH HOH . 
K 5 HOH B 35 1035 6 HOH HOH . 
K 5 HOH B 36 1036 111 HOH HOH . 
K 5 HOH B 37 1037 73 HOH HOH . 
K 5 HOH B 38 1038 89 HOH HOH . 
K 5 HOH B 39 1039 16 HOH HOH . 
K 5 HOH B 40 1040 24 HOH HOH . 
K 5 HOH B 41 1041 86 HOH HOH . 
K 5 HOH B 42 1042 87 HOH HOH . 
K 5 HOH B 43 1043 74 HOH HOH . 
K 5 HOH B 44 1044 29 HOH HOH . 
K 5 HOH B 45 1045 52 HOH HOH . 
K 5 HOH B 46 1046 104 HOH HOH . 
K 5 HOH B 47 1047 78 HOH HOH . 
K 5 HOH B 48 1048 112 HOH HOH . 
K 5 HOH B 49 1049 75 HOH HOH . 
K 5 HOH B 50 1050 88 HOH HOH . 
K 5 HOH B 51 1051 106 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA 4GA . . . H 3 -6.323 -38.135 -22.033 1 133.07 ? CAA 4GA 902 B 1 
HETATM 2 O OAB 4GA . . . H 3 -5.858 -31.717 -16.047 1 138.35 ? OAB 4GA 902 B 1 
HETATM 3 O OAC 4GA . . . H 3 -8.32 -31.027 -14.553 1 136.69 ? OAC 4GA 902 B 1 
HETATM 4 O OAD 4GA . . . H 3 -9.224 -32.601 -18.144 1 137.85 ? OAD 4GA 902 B 1 
HETATM 5 O OAE 4GA . . . H 3 -6.613 -30.539 -18.209 1 138.43 ? OAE 4GA 902 B 1 
HETATM 6 O OAF 4GA . . . H 3 -5.982 -33.031 -18.249 1 138.64 ? OAF 4GA 902 B 1 
HETATM 7 O OAG 4GA . . . H 3 -10.604 -31.21 -15.724 1 137.42 ? OAG 4GA 902 B 1 
HETATM 8 O OAH 4GA . . . H 3 -8.839 -29.569 -16.615 1 137.25 ? OAH 4GA 902 B 1 
HETATM 9 C CAI 4GA . . . H 3 -10.204 -36.01 -17.99 1 137.71 ? CAI 4GA 902 B 1 
HETATM 10 C CAJ 4GA . . . H 3 -10.136 -35.14 -16.985 1 137.79 ? CAJ 4GA 902 B 1 
HETATM 11 C CAK 4GA . . . H 3 -8.157 -35.373 -17.8 1 137.84 ? CAK 4GA 902 B 1 
HETATM 12 C CAL 4GA . . . H 3 -7.032 -38.413 -20.706 1 133.74 ? CAL 4GA 902 B 1 
HETATM 13 C CAM 4GA . . . H 3 -7.189 -37.105 -19.927 1 134.45 ? CAM 4GA 902 B 1 
HETATM 14 C CAN 4GA . . . H 3 -8.674 -36.757 -19.817 1 135.96 ? CAN 4GA 902 B 1 
HETATM 15 C CAO 4GA . . . H 3 -8.416 -33.548 -16.117 1 138.34 ? CAO 4GA 902 B 1 
HETATM 16 N NAP 4GA . . . H 3 -8.986 -36.132 -18.51 1 137.51 ? NAP 4GA 902 B 1 
HETATM 17 N NAQ 4GA . . . H 3 -8.875 -34.728 -16.886 1 138.07 ? NAQ 4GA 902 B 1 
HETATM 18 C CAR 4GA . . . H 3 -8.4 -32.306 -17.013 1 138.39 ? CAR 4GA 902 B 1 
HETATM 19 P PAS 4GA . . . H 3 -6.616 -31.959 -17.448 1 139.41 ? PAS 4GA 902 B 1 
HETATM 20 P PAT 4GA . . . H 3 -9.048 -30.89 -15.983 1 137.67 ? PAT 4GA 902 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           20 
#