data_5CVH
#
_model_server_result.job_id            XkX3_KU1jntjaX6Qm-uyug 
_model_server_result.datetime_utc      '2024-11-05 16:40:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cvh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":403}' 
#
_entry.id    5CVH 
#
_exptl.entry_id    5CVH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CVH 
_cell.length_a            64.495 
_cell.length_b            68.69 
_cell.length_c            333.1 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CVH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,J 1 1 
B,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 184 A ASN 161 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? 
metalc ? metalc2 A OD2 ASP 198 A ASP 175 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
metalc ? metalc3 C O1B ADP . A ADP 401 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? 
metalc ? metalc4 C O1A ADP . A ADP 401 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? 
metalc ? metalc5 E MG MG . A MG 403 1_555 J O HOH . A HOH 579 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? 
metalc ? metalc6 E MG MG . A MG 403 1_555 J O HOH . A HOH 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc7 B OD1 ASN 184 B ASN 161 1_555 I MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc8 B OD2 ASP 198 B ASP 175 1_555 I MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
metalc ? metalc9 G O3B ADP . B ADP 401 1_555 I MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? 
metalc ? metalc10 G O2A ADP . B ADP 401 1_555 I MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5CVH 
_atom_sites.fract_transf_matrix[1][1]    0.015505 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014558 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003002 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ADP A 1 401 1 ADP ADP . 
D 3 IHP A 1 402 1 IHP I6P . 
E 4 MG A 1 403 2 MG MG . 
F 5 ACT A 1 404 1 ACT ACT . 
G 2 ADP B 1 401 2 ADP ADP . 
H 3 IHP B 1 402 2 IHP I6P . 
I 4 MG B 1 403 1 MG MG . 
J 6 HOH A 1 501 104 HOH HOH . 
J 6 HOH A 2 502 108 HOH HOH . 
J 6 HOH A 3 503 262 HOH HOH . 
J 6 HOH A 4 504 4 HOH HOH . 
J 6 HOH A 5 505 18 HOH HOH . 
J 6 HOH A 6 506 86 HOH HOH . 
J 6 HOH A 7 507 174 HOH HOH . 
J 6 HOH A 8 508 129 HOH HOH . 
J 6 HOH A 9 509 19 HOH HOH . 
J 6 HOH A 10 510 222 HOH HOH . 
J 6 HOH A 11 511 28 HOH HOH . 
J 6 HOH A 12 512 265 HOH HOH . 
J 6 HOH A 13 513 96 HOH HOH . 
J 6 HOH A 14 514 221 HOH HOH . 
J 6 HOH A 15 515 168 HOH HOH . 
J 6 HOH A 16 516 50 HOH HOH . 
J 6 HOH A 17 517 250 HOH HOH . 
J 6 HOH A 18 518 81 HOH HOH . 
J 6 HOH A 19 519 21 HOH HOH . 
J 6 HOH A 20 520 230 HOH HOH . 
J 6 HOH A 21 521 137 HOH HOH . 
J 6 HOH A 22 522 125 HOH HOH . 
J 6 HOH A 23 523 15 HOH HOH . 
J 6 HOH A 24 524 188 HOH HOH . 
J 6 HOH A 25 525 111 HOH HOH . 
J 6 HOH A 26 526 73 HOH HOH . 
J 6 HOH A 27 527 165 HOH HOH . 
J 6 HOH A 28 528 128 HOH HOH . 
J 6 HOH A 29 529 7 HOH HOH . 
J 6 HOH A 30 530 198 HOH HOH . 
J 6 HOH A 31 531 26 HOH HOH . 
J 6 HOH A 32 532 233 HOH HOH . 
J 6 HOH A 33 533 161 HOH HOH . 
J 6 HOH A 34 534 170 HOH HOH . 
J 6 HOH A 35 535 238 HOH HOH . 
J 6 HOH A 36 536 141 HOH HOH . 
J 6 HOH A 37 537 22 HOH HOH . 
J 6 HOH A 38 538 207 HOH HOH . 
J 6 HOH A 39 539 67 HOH HOH . 
J 6 HOH A 40 540 57 HOH HOH . 
J 6 HOH A 41 541 208 HOH HOH . 
J 6 HOH A 42 542 186 HOH HOH . 
J 6 HOH A 43 543 187 HOH HOH . 
J 6 HOH A 44 544 237 HOH HOH . 
J 6 HOH A 45 545 2 HOH HOH . 
J 6 HOH A 46 546 9 HOH HOH . 
J 6 HOH A 47 547 82 HOH HOH . 
J 6 HOH A 48 548 54 HOH HOH . 
J 6 HOH A 49 549 29 HOH HOH . 
J 6 HOH A 50 550 251 HOH HOH . 
J 6 HOH A 51 551 206 HOH HOH . 
J 6 HOH A 52 552 90 HOH HOH . 
J 6 HOH A 53 553 36 HOH HOH . 
J 6 HOH A 54 554 153 HOH HOH . 
J 6 HOH A 55 555 32 HOH HOH . 
J 6 HOH A 56 556 172 HOH HOH . 
J 6 HOH A 57 557 203 HOH HOH . 
J 6 HOH A 58 558 91 HOH HOH . 
J 6 HOH A 59 559 177 HOH HOH . 
J 6 HOH A 60 560 227 HOH HOH . 
J 6 HOH A 61 561 212 HOH HOH . 
J 6 HOH A 62 562 66 HOH HOH . 
J 6 HOH A 63 563 179 HOH HOH . 
J 6 HOH A 64 564 87 HOH HOH . 
J 6 HOH A 65 565 244 HOH HOH . 
J 6 HOH A 66 566 254 HOH HOH . 
J 6 HOH A 67 567 11 HOH HOH . 
J 6 HOH A 68 568 17 HOH HOH . 
J 6 HOH A 69 569 142 HOH HOH . 
J 6 HOH A 70 570 194 HOH HOH . 
J 6 HOH A 71 571 264 HOH HOH . 
J 6 HOH A 72 572 229 HOH HOH . 
J 6 HOH A 73 573 193 HOH HOH . 
J 6 HOH A 74 574 37 HOH HOH . 
J 6 HOH A 75 575 214 HOH HOH . 
J 6 HOH A 76 576 232 HOH HOH . 
J 6 HOH A 77 577 151 HOH HOH . 
J 6 HOH A 78 578 30 HOH HOH . 
J 6 HOH A 79 579 261 HOH HOH . 
J 6 HOH A 80 580 178 HOH HOH . 
J 6 HOH A 81 581 169 HOH HOH . 
J 6 HOH A 82 582 61 HOH HOH . 
J 6 HOH A 83 583 34 HOH HOH . 
J 6 HOH A 84 584 3 HOH HOH . 
J 6 HOH A 85 585 216 HOH HOH . 
J 6 HOH A 86 586 140 HOH HOH . 
J 6 HOH A 87 587 258 HOH HOH . 
J 6 HOH A 88 588 62 HOH HOH . 
J 6 HOH A 89 589 14 HOH HOH . 
J 6 HOH A 90 590 253 HOH HOH . 
J 6 HOH A 91 591 89 HOH HOH . 
J 6 HOH A 92 592 133 HOH HOH . 
J 6 HOH A 93 593 23 HOH HOH . 
J 6 HOH A 94 594 235 HOH HOH . 
J 6 HOH A 95 595 156 HOH HOH . 
J 6 HOH A 96 596 147 HOH HOH . 
J 6 HOH A 97 597 40 HOH HOH . 
J 6 HOH A 98 598 59 HOH HOH . 
J 6 HOH A 99 599 75 HOH HOH . 
J 6 HOH A 100 600 134 HOH HOH . 
J 6 HOH A 101 601 74 HOH HOH . 
J 6 HOH A 102 602 10 HOH HOH . 
J 6 HOH A 103 603 234 HOH HOH . 
J 6 HOH A 104 604 41 HOH HOH . 
J 6 HOH A 105 605 218 HOH HOH . 
J 6 HOH A 106 606 112 HOH HOH . 
J 6 HOH A 107 607 13 HOH HOH . 
J 6 HOH A 108 608 167 HOH HOH . 
J 6 HOH A 109 609 145 HOH HOH . 
J 6 HOH A 110 610 185 HOH HOH . 
J 6 HOH A 111 611 64 HOH HOH . 
J 6 HOH A 112 612 209 HOH HOH . 
J 6 HOH A 113 613 257 HOH HOH . 
J 6 HOH A 114 614 183 HOH HOH . 
J 6 HOH A 115 615 120 HOH HOH . 
J 6 HOH A 116 616 223 HOH HOH . 
J 6 HOH A 117 617 94 HOH HOH . 
J 6 HOH A 118 618 35 HOH HOH . 
J 6 HOH A 119 619 93 HOH HOH . 
J 6 HOH A 120 620 149 HOH HOH . 
J 6 HOH A 121 621 121 HOH HOH . 
J 6 HOH A 122 622 159 HOH HOH . 
J 6 HOH A 123 623 110 HOH HOH . 
J 6 HOH A 124 624 190 HOH HOH . 
J 6 HOH A 125 625 48 HOH HOH . 
J 6 HOH A 126 626 45 HOH HOH . 
J 6 HOH A 127 627 135 HOH HOH . 
J 6 HOH A 128 628 88 HOH HOH . 
J 6 HOH A 129 629 224 HOH HOH . 
J 6 HOH A 130 630 228 HOH HOH . 
J 6 HOH A 131 631 144 HOH HOH . 
J 6 HOH A 132 632 69 HOH HOH . 
J 6 HOH A 133 633 252 HOH HOH . 
J 6 HOH A 134 634 255 HOH HOH . 
J 6 HOH A 135 635 225 HOH HOH . 
J 6 HOH A 136 636 109 HOH HOH . 
J 6 HOH A 137 637 197 HOH HOH . 
J 6 HOH A 138 638 6 HOH HOH . 
J 6 HOH A 139 639 236 HOH HOH . 
J 6 HOH A 140 640 27 HOH HOH . 
J 6 HOH A 141 641 199 HOH HOH . 
J 6 HOH A 142 642 163 HOH HOH . 
J 6 HOH A 143 643 205 HOH HOH . 
J 6 HOH A 144 644 182 HOH HOH . 
J 6 HOH A 145 645 171 HOH HOH . 
J 6 HOH A 146 646 102 HOH HOH . 
J 6 HOH A 147 647 124 HOH HOH . 
J 6 HOH A 148 648 150 HOH HOH . 
J 6 HOH A 149 649 100 HOH HOH . 
J 6 HOH A 150 650 53 HOH HOH . 
J 6 HOH A 151 651 195 HOH HOH . 
J 6 HOH A 152 652 202 HOH HOH . 
J 6 HOH A 153 653 164 HOH HOH . 
J 6 HOH A 154 654 138 HOH HOH . 
J 6 HOH A 155 655 47 HOH HOH . 
J 6 HOH A 156 656 42 HOH HOH . 
J 6 HOH A 157 657 105 HOH HOH . 
J 6 HOH A 158 658 210 HOH HOH . 
J 6 HOH A 159 659 260 HOH HOH . 
J 6 HOH A 160 660 39 HOH HOH . 
J 6 HOH A 161 661 136 HOH HOH . 
J 6 HOH A 162 662 239 HOH HOH . 
J 6 HOH A 163 663 55 HOH HOH . 
J 6 HOH A 164 664 78 HOH HOH . 
J 6 HOH A 165 665 213 HOH HOH . 
J 6 HOH A 166 666 117 HOH HOH . 
J 6 HOH A 167 667 122 HOH HOH . 
K 6 HOH B 1 501 263 HOH HOH . 
K 6 HOH B 2 502 259 HOH HOH . 
K 6 HOH B 3 503 97 HOH HOH . 
K 6 HOH B 4 504 155 HOH HOH . 
K 6 HOH B 5 505 118 HOH HOH . 
K 6 HOH B 6 506 248 HOH HOH . 
K 6 HOH B 7 507 162 HOH HOH . 
K 6 HOH B 8 508 132 HOH HOH . 
K 6 HOH B 9 509 60 HOH HOH . 
K 6 HOH B 10 510 71 HOH HOH . 
K 6 HOH B 11 511 243 HOH HOH . 
K 6 HOH B 12 512 191 HOH HOH . 
K 6 HOH B 13 513 119 HOH HOH . 
K 6 HOH B 14 514 220 HOH HOH . 
K 6 HOH B 15 515 189 HOH HOH . 
K 6 HOH B 16 516 196 HOH HOH . 
K 6 HOH B 17 517 20 HOH HOH . 
K 6 HOH B 18 518 103 HOH HOH . 
K 6 HOH B 19 519 249 HOH HOH . 
K 6 HOH B 20 520 215 HOH HOH . 
K 6 HOH B 21 521 246 HOH HOH . 
K 6 HOH B 22 522 219 HOH HOH . 
K 6 HOH B 23 523 160 HOH HOH . 
K 6 HOH B 24 524 240 HOH HOH . 
K 6 HOH B 25 525 231 HOH HOH . 
K 6 HOH B 26 526 241 HOH HOH . 
K 6 HOH B 27 527 204 HOH HOH . 
K 6 HOH B 28 528 211 HOH HOH . 
K 6 HOH B 29 529 146 HOH HOH . 
K 6 HOH B 30 530 70 HOH HOH . 
K 6 HOH B 31 531 158 HOH HOH . 
K 6 HOH B 32 532 217 HOH HOH . 
K 6 HOH B 33 533 180 HOH HOH . 
K 6 HOH B 34 534 63 HOH HOH . 
K 6 HOH B 35 535 139 HOH HOH . 
K 6 HOH B 36 536 44 HOH HOH . 
K 6 HOH B 37 537 131 HOH HOH . 
K 6 HOH B 38 538 31 HOH HOH . 
K 6 HOH B 39 539 201 HOH HOH . 
K 6 HOH B 40 540 226 HOH HOH . 
K 6 HOH B 41 541 157 HOH HOH . 
K 6 HOH B 42 542 242 HOH HOH . 
K 6 HOH B 43 543 200 HOH HOH . 
K 6 HOH B 44 544 256 HOH HOH . 
K 6 HOH B 45 545 101 HOH HOH . 
K 6 HOH B 46 546 77 HOH HOH . 
K 6 HOH B 47 547 192 HOH HOH . 
K 6 HOH B 48 548 245 HOH HOH . 
K 6 HOH B 49 549 85 HOH HOH . 
K 6 HOH B 50 550 166 HOH HOH . 
K 6 HOH B 51 551 84 HOH HOH . 
K 6 HOH B 52 552 98 HOH HOH . 
K 6 HOH B 53 553 247 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               14.711 
_atom_site.Cartn_y               134.638 
_atom_site.Cartn_z               355.47 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        38.17 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           403 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#