data_5CVT # _model_server_result.job_id bQiR90HUgAoJ5Bti70asDw _model_server_result.datetime_utc '2024-11-23 14:27:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cvt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":200}' # _entry.id 5CVT # _exptl.entry_id 5CVT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CVT _cell.length_a 98.695 _cell.length_b 98.695 _cell.length_c 165.057 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CVT _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 97 A ALA 96 1_555 A N FTR 98 A FTR 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale2 A C FTR 98 A FTR 97 1_555 A N THR 99 A THR 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale3 B C ALA 97 B ALA 96 1_555 B N FTR 98 B FTR 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale4 B C FTR 98 B FTR 97 1_555 B N THR 99 B THR 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale5 H C15 PGF . B PGF 203 1_555 H C15 PGF . B PGF 203 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 sing metalc ? metalc1 G K K . B K 202 1_555 H O8 PGF . B PGF 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc2 G K K . B K 202 1_555 H O5 PGF . B PGF 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.425 ? metalc ? metalc3 G K K . B K 202 1_555 H O6 PGF . B PGF 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.296 ? metalc ? metalc4 G K K . B K 202 1_555 H O7 PGF . B PGF 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.063 ? metalc ? metalc5 G K K . B K 202 1_555 J O HOH . B HOH 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 5CVT _atom_sites.fract_transf_matrix[1][1] 0.010132 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006059 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 200 200 ACT ACT . D 3 CIT A 1 201 201 CIT CIT . E 2 ACT B 1 200 200 ACT ACT . F 3 CIT B 1 201 201 CIT CIT . G 4 K B 1 202 202 K K . H 5 PGF B 1 203 203 PGF PGF . I 6 HOH A 1 301 301 HOH HOH . I 6 HOH A 2 302 302 HOH HOH . I 6 HOH A 3 303 303 HOH HOH . I 6 HOH A 4 304 304 HOH HOH . I 6 HOH A 5 305 305 HOH HOH . I 6 HOH A 6 306 306 HOH HOH . I 6 HOH A 7 307 307 HOH HOH . I 6 HOH A 8 308 308 HOH HOH . I 6 HOH A 9 309 309 HOH HOH . I 6 HOH A 10 310 310 HOH HOH . I 6 HOH A 11 311 311 HOH HOH . I 6 HOH A 12 312 312 HOH HOH . I 6 HOH A 13 313 313 HOH HOH . I 6 HOH A 14 314 314 HOH HOH . I 6 HOH A 15 315 315 HOH HOH . I 6 HOH A 16 316 316 HOH HOH . I 6 HOH A 17 317 317 HOH HOH . I 6 HOH A 18 318 318 HOH HOH . I 6 HOH A 19 319 319 HOH HOH . I 6 HOH A 20 320 320 HOH HOH . I 6 HOH A 21 321 321 HOH HOH . I 6 HOH A 22 322 322 HOH HOH . I 6 HOH A 23 323 323 HOH HOH . I 6 HOH A 24 324 324 HOH HOH . I 6 HOH A 25 325 325 HOH HOH . I 6 HOH A 26 326 326 HOH HOH . I 6 HOH A 27 327 327 HOH HOH . I 6 HOH A 28 328 328 HOH HOH . I 6 HOH A 29 329 329 HOH HOH . I 6 HOH A 30 330 330 HOH HOH . I 6 HOH A 31 331 331 HOH HOH . I 6 HOH A 32 332 332 HOH HOH . I 6 HOH A 33 333 333 HOH HOH . I 6 HOH A 34 334 334 HOH HOH . I 6 HOH A 35 335 335 HOH HOH . I 6 HOH A 36 336 336 HOH HOH . I 6 HOH A 37 337 337 HOH HOH . I 6 HOH A 38 338 338 HOH HOH . I 6 HOH A 39 339 339 HOH HOH . I 6 HOH A 40 340 340 HOH HOH . I 6 HOH A 41 341 341 HOH HOH . I 6 HOH A 42 342 342 HOH HOH . I 6 HOH A 43 343 343 HOH HOH . I 6 HOH A 44 344 344 HOH HOH . I 6 HOH A 45 345 345 HOH HOH . I 6 HOH A 46 346 346 HOH HOH . I 6 HOH A 47 347 347 HOH HOH . I 6 HOH A 48 348 348 HOH HOH . I 6 HOH A 49 349 349 HOH HOH . I 6 HOH A 50 350 350 HOH HOH . I 6 HOH A 51 351 351 HOH HOH . I 6 HOH A 52 352 352 HOH HOH . I 6 HOH A 53 353 353 HOH HOH . I 6 HOH A 54 354 354 HOH HOH . I 6 HOH A 55 355 355 HOH HOH . I 6 HOH A 56 356 356 HOH HOH . I 6 HOH A 57 357 357 HOH HOH . I 6 HOH A 58 358 358 HOH HOH . I 6 HOH A 59 359 359 HOH HOH . I 6 HOH A 60 360 360 HOH HOH . I 6 HOH A 61 361 361 HOH HOH . I 6 HOH A 62 362 362 HOH HOH . I 6 HOH A 63 363 363 HOH HOH . I 6 HOH A 64 364 364 HOH HOH . I 6 HOH A 65 365 365 HOH HOH . I 6 HOH A 66 366 366 HOH HOH . I 6 HOH A 67 367 367 HOH HOH . I 6 HOH A 68 368 368 HOH HOH . I 6 HOH A 69 369 369 HOH HOH . I 6 HOH A 70 370 370 HOH HOH . I 6 HOH A 71 371 371 HOH HOH . I 6 HOH A 72 372 372 HOH HOH . I 6 HOH A 73 373 373 HOH HOH . I 6 HOH A 74 374 374 HOH HOH . I 6 HOH A 75 375 375 HOH HOH . I 6 HOH A 76 376 376 HOH HOH . I 6 HOH A 77 377 377 HOH HOH . I 6 HOH A 78 378 378 HOH HOH . I 6 HOH A 79 379 379 HOH HOH . I 6 HOH A 80 380 380 HOH HOH . I 6 HOH A 81 381 381 HOH HOH . I 6 HOH A 82 382 382 HOH HOH . I 6 HOH A 83 383 384 HOH HOH . I 6 HOH A 84 384 385 HOH HOH . I 6 HOH A 85 385 386 HOH HOH . I 6 HOH A 86 386 387 HOH HOH . I 6 HOH A 87 387 388 HOH HOH . I 6 HOH A 88 388 389 HOH HOH . I 6 HOH A 89 389 391 HOH HOH . I 6 HOH A 90 390 392 HOH HOH . I 6 HOH A 91 391 394 HOH HOH . I 6 HOH A 92 392 383 HOH HOH . I 6 HOH A 93 393 395 HOH HOH . I 6 HOH A 94 394 396 HOH HOH . I 6 HOH A 95 395 397 HOH HOH . I 6 HOH A 96 396 393 HOH HOH . I 6 HOH A 97 397 398 HOH HOH . I 6 HOH A 98 398 399 HOH HOH . I 6 HOH A 99 399 390 HOH HOH . I 6 HOH A 100 400 400 HOH HOH . I 6 HOH A 101 401 401 HOH HOH . I 6 HOH A 102 402 402 HOH HOH . I 6 HOH A 103 403 403 HOH HOH . I 6 HOH A 104 404 404 HOH HOH . I 6 HOH A 105 405 405 HOH HOH . I 6 HOH A 106 406 406 HOH HOH . I 6 HOH A 107 407 407 HOH HOH . I 6 HOH A 108 408 408 HOH HOH . I 6 HOH A 109 409 409 HOH HOH . I 6 HOH A 110 410 410 HOH HOH . I 6 HOH A 111 411 411 HOH HOH . I 6 HOH A 112 412 412 HOH HOH . I 6 HOH A 113 413 413 HOH HOH . I 6 HOH A 114 414 414 HOH HOH . I 6 HOH A 115 415 415 HOH HOH . I 6 HOH A 116 416 416 HOH HOH . I 6 HOH A 117 417 417 HOH HOH . I 6 HOH A 118 418 418 HOH HOH . I 6 HOH A 119 419 419 HOH HOH . I 6 HOH A 120 420 420 HOH HOH . I 6 HOH A 121 421 421 HOH HOH . I 6 HOH A 122 422 422 HOH HOH . I 6 HOH A 123 423 423 HOH HOH . I 6 HOH A 124 424 424 HOH HOH . I 6 HOH A 125 425 425 HOH HOH . I 6 HOH A 126 426 426 HOH HOH . I 6 HOH A 127 427 427 HOH HOH . I 6 HOH A 128 428 428 HOH HOH . I 6 HOH A 129 429 429 HOH HOH . J 6 HOH B 1 301 301 HOH HOH . J 6 HOH B 2 302 302 HOH HOH . J 6 HOH B 3 303 303 HOH HOH . J 6 HOH B 4 304 304 HOH HOH . J 6 HOH B 5 305 305 HOH HOH . J 6 HOH B 6 306 306 HOH HOH . J 6 HOH B 7 307 307 HOH HOH . J 6 HOH B 8 308 308 HOH HOH . J 6 HOH B 9 309 309 HOH HOH . J 6 HOH B 10 310 310 HOH HOH . J 6 HOH B 11 311 311 HOH HOH . J 6 HOH B 12 312 312 HOH HOH . J 6 HOH B 13 313 313 HOH HOH . J 6 HOH B 14 314 314 HOH HOH . J 6 HOH B 15 315 315 HOH HOH . J 6 HOH B 16 316 316 HOH HOH . J 6 HOH B 17 317 317 HOH HOH . J 6 HOH B 18 318 318 HOH HOH . J 6 HOH B 19 319 319 HOH HOH . J 6 HOH B 20 320 320 HOH HOH . J 6 HOH B 21 321 321 HOH HOH . J 6 HOH B 22 322 322 HOH HOH . J 6 HOH B 23 323 323 HOH HOH . J 6 HOH B 24 324 324 HOH HOH . J 6 HOH B 25 325 325 HOH HOH . J 6 HOH B 26 326 326 HOH HOH . J 6 HOH B 27 327 327 HOH HOH . J 6 HOH B 28 328 328 HOH HOH . J 6 HOH B 29 329 329 HOH HOH . J 6 HOH B 30 330 330 HOH HOH . J 6 HOH B 31 331 331 HOH HOH . J 6 HOH B 32 332 332 HOH HOH . J 6 HOH B 33 333 333 HOH HOH . J 6 HOH B 34 334 334 HOH HOH . J 6 HOH B 35 335 335 HOH HOH . J 6 HOH B 36 336 336 HOH HOH . J 6 HOH B 37 337 337 HOH HOH . J 6 HOH B 38 338 338 HOH HOH . J 6 HOH B 39 339 339 HOH HOH . J 6 HOH B 40 340 340 HOH HOH . J 6 HOH B 41 341 341 HOH HOH . J 6 HOH B 42 342 342 HOH HOH . J 6 HOH B 43 343 343 HOH HOH . J 6 HOH B 44 344 344 HOH HOH . J 6 HOH B 45 345 345 HOH HOH . J 6 HOH B 46 346 346 HOH HOH . J 6 HOH B 47 347 347 HOH HOH . J 6 HOH B 48 348 348 HOH HOH . J 6 HOH B 49 349 349 HOH HOH . J 6 HOH B 50 350 350 HOH HOH . J 6 HOH B 51 351 351 HOH HOH . J 6 HOH B 52 352 352 HOH HOH . J 6 HOH B 53 353 353 HOH HOH . J 6 HOH B 54 354 354 HOH HOH . J 6 HOH B 55 355 355 HOH HOH . J 6 HOH B 56 356 356 HOH HOH . J 6 HOH B 57 357 357 HOH HOH . J 6 HOH B 58 358 358 HOH HOH . J 6 HOH B 59 359 359 HOH HOH . J 6 HOH B 60 360 360 HOH HOH . J 6 HOH B 61 361 361 HOH HOH . J 6 HOH B 62 362 362 HOH HOH . J 6 HOH B 63 363 363 HOH HOH . J 6 HOH B 64 364 364 HOH HOH . J 6 HOH B 65 365 365 HOH HOH . J 6 HOH B 66 366 366 HOH HOH . J 6 HOH B 67 367 367 HOH HOH . J 6 HOH B 68 368 368 HOH HOH . J 6 HOH B 69 369 369 HOH HOH . J 6 HOH B 70 370 370 HOH HOH . J 6 HOH B 71 371 371 HOH HOH . J 6 HOH B 72 372 372 HOH HOH . J 6 HOH B 73 373 373 HOH HOH . J 6 HOH B 74 374 374 HOH HOH . J 6 HOH B 75 375 375 HOH HOH . J 6 HOH B 76 376 376 HOH HOH . J 6 HOH B 77 377 377 HOH HOH . J 6 HOH B 78 378 378 HOH HOH . J 6 HOH B 79 379 379 HOH HOH . J 6 HOH B 80 380 380 HOH HOH . J 6 HOH B 81 381 381 HOH HOH . J 6 HOH B 82 382 382 HOH HOH . J 6 HOH B 83 383 383 HOH HOH . J 6 HOH B 84 384 384 HOH HOH . J 6 HOH B 85 385 385 HOH HOH . J 6 HOH B 86 386 386 HOH HOH . J 6 HOH B 87 387 387 HOH HOH . J 6 HOH B 88 388 388 HOH HOH . J 6 HOH B 89 389 389 HOH HOH . J 6 HOH B 90 390 390 HOH HOH . J 6 HOH B 91 391 391 HOH HOH . J 6 HOH B 92 392 392 HOH HOH . J 6 HOH B 93 393 393 HOH HOH . J 6 HOH B 94 394 394 HOH HOH . J 6 HOH B 95 395 395 HOH HOH . J 6 HOH B 96 396 396 HOH HOH . J 6 HOH B 97 397 397 HOH HOH . J 6 HOH B 98 398 398 HOH HOH . J 6 HOH B 99 399 399 HOH HOH . J 6 HOH B 100 400 400 HOH HOH . J 6 HOH B 101 401 401 HOH HOH . J 6 HOH B 102 402 402 HOH HOH . J 6 HOH B 103 403 403 HOH HOH . J 6 HOH B 104 404 404 HOH HOH . J 6 HOH B 105 405 405 HOH HOH . J 6 HOH B 106 406 406 HOH HOH . J 6 HOH B 107 407 407 HOH HOH . J 6 HOH B 108 408 408 HOH HOH . J 6 HOH B 109 409 409 HOH HOH . J 6 HOH B 110 410 410 HOH HOH . J 6 HOH B 111 411 411 HOH HOH . J 6 HOH B 112 412 412 HOH HOH . J 6 HOH B 113 413 413 HOH HOH . J 6 HOH B 114 414 414 HOH HOH . J 6 HOH B 115 415 415 HOH HOH . J 6 HOH B 116 416 416 HOH HOH . J 6 HOH B 117 417 417 HOH HOH . J 6 HOH B 118 418 418 HOH HOH . J 6 HOH B 119 419 419 HOH HOH . J 6 HOH B 120 420 420 HOH HOH . J 6 HOH B 121 421 421 HOH HOH . J 6 HOH B 122 422 422 HOH HOH . J 6 HOH B 123 423 423 HOH HOH . J 6 HOH B 124 424 424 HOH HOH . J 6 HOH B 125 425 425 HOH HOH . J 6 HOH B 126 426 426 HOH HOH . J 6 HOH B 127 427 427 HOH HOH . J 6 HOH B 128 428 428 HOH HOH . J 6 HOH B 129 429 429 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . E 2 3.036 42.671 10.988 1 65.81 ? C ACT 200 B 1 HETATM 2 O O ACT . . . E 2 2.28 42.828 10.041 1 64.57 ? O ACT 200 B 1 HETATM 3 O OXT ACT . . . E 2 3.124 41.574 11.516 1 59.84 ? OXT ACT 200 B 1 HETATM 4 C CH3 ACT . . . E 2 3.842 43.807 11.492 1 64.57 ? CH3 ACT 200 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #