data_5CY8
#
_model_server_result.job_id            NDMo_NRDPABuJx3EG4fmIQ 
_model_server_result.datetime_utc      '2024-10-20 08:26:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cy8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":205}' 
#
_entry.id    5CY8 
#
_exptl.entry_id    5CY8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              59.044 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5CY8 
_cell.length_a            58.661 
_cell.length_b            58.661 
_cell.length_c            263.749 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CY8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O LEU 14 A LEU 14 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? 
metalc ? metalc2 A OE2 GLU 37 A GLU 37 1_555 E CD CD . A CD 204 8_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc3 A NE2 HIS 43 A HIS 43 1_555 C CD CD . A CD 202 8_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc4 A SG CYS 99 A CYS 99 1_555 D CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? 
metalc ? metalc5 A OE1 GLU 128 A GLU 128 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc6 A OE2 GLU 130 A GLU 130 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc7 A OE1 GLU 132 A GLU 132 1_555 E CD CD . A CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? 
metalc ? metalc8 A OE2 GLU 132 A GLU 132 1_555 E CD CD . A CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc9 A NE2 HIS 141 A HIS 141 1_555 D CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? 
metalc ? metalc10 A NE2 HIS 145 A HIS 145 1_555 D CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? 
metalc ? metalc11 E CD CD . A CD 204 1_555 H O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.812 ? 
metalc ? metalc12 E CD CD . A CD 204 1_555 H O HOH . A HOH 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? 
metalc ? metalc13 G NA NA . A NA 206 1_555 H O HOH . A HOH 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc14 G NA NA . A NA 206 1_555 H O HOH . A HOH 401 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? 
#
_chem_comp.formula           'C2 H3 O2 -1' 
_chem_comp.formula_weight    59.044 
_chem_comp.id                ACT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACT doub 24 n n 
C OXT ACT sing 25 n n 
C CH3 ACT sing 26 n n 
CH3 H1 ACT sing 27 n n 
CH3 H2 ACT sing 28 n n 
CH3 H3 ACT sing 29 n n 
#
_atom_sites.entry_id                     5CY8 
_atom_sites.fract_transf_matrix[1][1]    0.017047 
_atom_sites.fract_transf_matrix[1][2]    0.009842 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019684 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003791 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 56V A 1 201 1 56V 244 . 
C 3 CD A 1 202 1 CD CD . 
D 3 CD A 1 203 2 CD CD . 
E 3 CD A 1 204 3 CD CD . 
F 4 ACT A 1 205 1 ACT ACT . 
G 5 NA A 1 206 1 NA NA . 
H 6 HOH A 1 301 17 HOH HOH . 
H 6 HOH A 2 302 34 HOH HOH . 
H 6 HOH A 3 303 93 HOH HOH . 
H 6 HOH A 4 304 64 HOH HOH . 
H 6 HOH A 5 305 14 HOH HOH . 
H 6 HOH A 6 306 17 HOH HOH . 
H 6 HOH A 7 307 41 HOH HOH . 
H 6 HOH A 8 308 28 HOH HOH . 
H 6 HOH A 9 309 35 HOH HOH . 
H 6 HOH A 10 310 49 HOH HOH . 
H 6 HOH A 11 311 71 HOH HOH . 
H 6 HOH A 12 312 15 HOH HOH . 
H 6 HOH A 13 313 72 HOH HOH . 
H 6 HOH A 14 314 82 HOH HOH . 
H 6 HOH A 15 315 18 HOH HOH . 
H 6 HOH A 16 316 25 HOH HOH . 
H 6 HOH A 17 317 59 HOH HOH . 
H 6 HOH A 18 318 67 HOH HOH . 
H 6 HOH A 19 319 2 HOH HOH . 
H 6 HOH A 20 320 98 HOH HOH . 
H 6 HOH A 21 321 24 HOH HOH . 
H 6 HOH A 22 322 52 HOH HOH . 
H 6 HOH A 23 323 13 HOH HOH . 
H 6 HOH A 24 324 91 HOH HOH . 
H 6 HOH A 25 325 20 HOH HOH . 
H 6 HOH A 26 326 12 HOH HOH . 
H 6 HOH A 27 327 47 HOH HOH . 
H 6 HOH A 28 328 32 HOH HOH . 
H 6 HOH A 29 329 6 HOH HOH . 
H 6 HOH A 30 330 86 HOH HOH . 
H 6 HOH A 31 331 36 HOH HOH . 
H 6 HOH A 32 332 80 HOH HOH . 
H 6 HOH A 33 333 16 HOH HOH . 
H 6 HOH A 34 334 81 HOH HOH . 
H 6 HOH A 35 335 29 HOH HOH . 
H 6 HOH A 36 336 6 HOH HOH . 
H 6 HOH A 37 337 79 HOH HOH . 
H 6 HOH A 38 338 48 HOH HOH . 
H 6 HOH A 39 339 7 HOH HOH . 
H 6 HOH A 40 340 54 HOH HOH . 
H 6 HOH A 41 341 102 HOH HOH . 
H 6 HOH A 42 342 4 HOH HOH . 
H 6 HOH A 43 343 12 HOH HOH . 
H 6 HOH A 44 344 96 HOH HOH . 
H 6 HOH A 45 345 51 HOH HOH . 
H 6 HOH A 46 346 87 HOH HOH . 
H 6 HOH A 47 347 37 HOH HOH . 
H 6 HOH A 48 348 30 HOH HOH . 
H 6 HOH A 49 349 40 HOH HOH . 
H 6 HOH A 50 350 76 HOH HOH . 
H 6 HOH A 51 351 38 HOH HOH . 
H 6 HOH A 52 352 26 HOH HOH . 
H 6 HOH A 53 353 3 HOH HOH . 
H 6 HOH A 54 354 8 HOH HOH . 
H 6 HOH A 55 355 43 HOH HOH . 
H 6 HOH A 56 356 45 HOH HOH . 
H 6 HOH A 57 357 74 HOH HOH . 
H 6 HOH A 58 358 31 HOH HOH . 
H 6 HOH A 59 359 68 HOH HOH . 
H 6 HOH A 60 360 46 HOH HOH . 
H 6 HOH A 61 361 7 HOH HOH . 
H 6 HOH A 62 362 1 HOH HOH . 
H 6 HOH A 63 363 33 HOH HOH . 
H 6 HOH A 64 364 1 HOH HOH . 
H 6 HOH A 65 365 9 HOH HOH . 
H 6 HOH A 66 366 9 HOH HOH . 
H 6 HOH A 67 367 50 HOH HOH . 
H 6 HOH A 68 368 62 HOH HOH . 
H 6 HOH A 69 369 11 HOH HOH . 
H 6 HOH A 70 370 53 HOH HOH . 
H 6 HOH A 71 371 70 HOH HOH . 
H 6 HOH A 72 372 19 HOH HOH . 
H 6 HOH A 73 373 56 HOH HOH . 
H 6 HOH A 74 374 15 HOH HOH . 
H 6 HOH A 75 375 66 HOH HOH . 
H 6 HOH A 76 376 8 HOH HOH . 
H 6 HOH A 77 377 65 HOH HOH . 
H 6 HOH A 78 378 16 HOH HOH . 
H 6 HOH A 79 379 63 HOH HOH . 
H 6 HOH A 80 380 85 HOH HOH . 
H 6 HOH A 81 381 13 HOH HOH . 
H 6 HOH A 82 382 58 HOH HOH . 
H 6 HOH A 83 383 3 HOH HOH . 
H 6 HOH A 84 384 14 HOH HOH . 
H 6 HOH A 85 385 42 HOH HOH . 
H 6 HOH A 86 386 94 HOH HOH . 
H 6 HOH A 87 387 23 HOH HOH . 
H 6 HOH A 88 388 77 HOH HOH . 
H 6 HOH A 89 389 22 HOH HOH . 
H 6 HOH A 90 390 60 HOH HOH . 
H 6 HOH A 91 391 2 HOH HOH . 
H 6 HOH A 92 392 27 HOH HOH . 
H 6 HOH A 93 393 84 HOH HOH . 
H 6 HOH A 94 394 83 HOH HOH . 
H 6 HOH A 95 395 39 HOH HOH . 
H 6 HOH A 96 396 75 HOH HOH . 
H 6 HOH A 97 397 89 HOH HOH . 
H 6 HOH A 98 398 5 HOH HOH . 
H 6 HOH A 99 399 18 HOH HOH . 
H 6 HOH A 100 400 5 HOH HOH . 
H 6 HOH A 101 401 10 HOH HOH . 
H 6 HOH A 102 402 88 HOH HOH . 
H 6 HOH A 103 403 21 HOH HOH . 
H 6 HOH A 104 404 19 HOH HOH . 
H 6 HOH A 105 405 101 HOH HOH . 
H 6 HOH A 106 406 4 HOH HOH . 
H 6 HOH A 107 407 55 HOH HOH . 
H 6 HOH A 108 408 44 HOH HOH . 
H 6 HOH A 109 409 11 HOH HOH . 
H 6 HOH A 110 410 97 HOH HOH . 
H 6 HOH A 111 411 99 HOH HOH . 
H 6 HOH A 112 412 78 HOH HOH . 
H 6 HOH A 113 413 73 HOH HOH . 
H 6 HOH A 114 414 90 HOH HOH . 
H 6 HOH A 115 415 95 HOH HOH . 
H 6 HOH A 116 416 100 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACT . . . F 4 13.641 -4.967 7.578 1 27.28 ? C ACT 205 A 1 
HETATM 2 O O ACT . . . F 4 13.322 -5.696 6.588 1 26.9 ? O ACT 205 A 1 
HETATM 3 O OXT ACT . . . F 4 14.812 -4.537 7.848 1 30.8 ? OXT ACT 205 A 1 
HETATM 4 C CH3 ACT . . . F 4 12.56 -4.573 8.491 1 25.36 ? CH3 ACT 205 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#