data_5CZD
#
_model_server_result.job_id            oGgOZEU4FXf8UKVWyA56rg 
_model_server_result.datetime_utc      '2024-11-14 19:01:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5czd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":101}' 
#
_entry.id    5CZD 
#
_exptl.entry_id    5CZD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              358.348 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "4'-PHOSPHOPANTETHEINE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CZD 
_cell.length_a            44.14 
_cell.length_b            68.23 
_cell.length_c            148.4 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CZD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B OG SER 39 B SER 36 1_555 C P24 PNS . B PNS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.591 ? 
covale ? covale2 C S44 PNS . B PNS 101 1_555 D CAH 1N2 . B 1N2 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.9 ? 
#
_chem_comp.formula           'C11 H23 N2 O7 P S' 
_chem_comp.formula_weight    358.348 
_chem_comp.id                PNS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "4'-PHOSPHOPANTETHEINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O23 P24 PNS sing 289 n n 
O23 HOP1 PNS sing 290 n n 
P24 O25 PNS sing 291 n n 
P24 O26 PNS doub 292 n n 
P24 O27 PNS sing 293 n n 
O25 HOP2 PNS sing 294 n n 
O27 C28 PNS sing 295 n n 
C28 C29 PNS sing 296 n n 
C28 H282 PNS sing 297 n n 
C28 H281 PNS sing 298 n n 
C29 C30 PNS sing 299 n n 
C29 C31 PNS sing 300 n n 
C29 C32 PNS sing 301 n n 
C30 H303 PNS sing 302 n n 
C30 H302 PNS sing 303 n n 
C30 H301 PNS sing 304 n n 
C31 H313 PNS sing 305 n n 
C31 H312 PNS sing 306 n n 
C31 H311 PNS sing 307 n n 
C32 O33 PNS sing 308 n n 
C32 C34 PNS sing 309 n n 
C32 H32 PNS sing 310 n n 
O33 H33 PNS sing 311 n n 
C34 O35 PNS doub 312 n n 
C34 N36 PNS sing 313 n n 
N36 C37 PNS sing 314 n n 
N36 H36 PNS sing 315 n n 
C37 C38 PNS sing 316 n n 
C37 H372 PNS sing 317 n n 
C37 H371 PNS sing 318 n n 
C38 C39 PNS sing 319 n n 
C38 H382 PNS sing 320 n n 
C38 H381 PNS sing 321 n n 
C39 O40 PNS doub 322 n n 
C39 N41 PNS sing 323 n n 
N41 C42 PNS sing 324 n n 
N41 H41 PNS sing 325 n n 
C42 C43 PNS sing 326 n n 
C42 H422 PNS sing 327 n n 
C42 H421 PNS sing 328 n n 
C43 S44 PNS sing 329 n n 
C43 H431 PNS sing 330 n n 
C43 H432 PNS sing 331 n n 
S44 H44 PNS sing 332 n n 
#
_atom_sites.entry_id                     5CZD 
_atom_sites.fract_transf_matrix[1][1]    0.022655 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014656 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006739 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 PNS B 1 101 101 PNS PNS . 
D 4 1N2 B 1 102 102 1N2 1N2 . 
E 5 HOH A 1 401 32 HOH HOH . 
E 5 HOH A 2 402 31 HOH HOH . 
E 5 HOH A 3 403 19 HOH HOH . 
E 5 HOH A 4 404 34 HOH HOH . 
E 5 HOH A 5 405 37 HOH HOH . 
E 5 HOH A 6 406 33 HOH HOH . 
E 5 HOH A 7 407 15 HOH HOH . 
E 5 HOH A 8 408 46 HOH HOH . 
E 5 HOH A 9 409 43 HOH HOH . 
E 5 HOH A 10 410 24 HOH HOH . 
E 5 HOH A 11 411 1 HOH HOH . 
E 5 HOH A 12 412 27 HOH HOH . 
E 5 HOH A 13 413 36 HOH HOH . 
E 5 HOH A 14 414 14 HOH HOH . 
E 5 HOH A 15 415 71 HOH HOH . 
E 5 HOH A 16 416 13 HOH HOH . 
E 5 HOH A 17 417 44 HOH HOH . 
E 5 HOH A 18 418 6 HOH HOH . 
E 5 HOH A 19 419 10 HOH HOH . 
E 5 HOH A 20 420 2 HOH HOH . 
E 5 HOH A 21 421 28 HOH HOH . 
E 5 HOH A 22 422 17 HOH HOH . 
E 5 HOH A 23 423 53 HOH HOH . 
E 5 HOH A 24 424 40 HOH HOH . 
E 5 HOH A 25 425 25 HOH HOH . 
E 5 HOH A 26 426 4 HOH HOH . 
E 5 HOH A 27 427 20 HOH HOH . 
E 5 HOH A 28 428 5 HOH HOH . 
E 5 HOH A 29 429 18 HOH HOH . 
E 5 HOH A 30 430 77 HOH HOH . 
E 5 HOH A 31 431 9 HOH HOH . 
E 5 HOH A 32 432 3 HOH HOH . 
E 5 HOH A 33 433 11 HOH HOH . 
E 5 HOH A 34 434 60 HOH HOH . 
E 5 HOH A 35 435 22 HOH HOH . 
E 5 HOH A 36 436 26 HOH HOH . 
E 5 HOH A 37 437 59 HOH HOH . 
E 5 HOH A 38 438 16 HOH HOH . 
E 5 HOH A 39 439 8 HOH HOH . 
E 5 HOH A 40 440 38 HOH HOH . 
E 5 HOH A 41 441 50 HOH HOH . 
E 5 HOH A 42 442 30 HOH HOH . 
E 5 HOH A 43 443 73 HOH HOH . 
E 5 HOH A 44 444 21 HOH HOH . 
E 5 HOH A 45 445 23 HOH HOH . 
E 5 HOH A 46 446 7 HOH HOH . 
E 5 HOH A 47 447 49 HOH HOH . 
E 5 HOH A 48 448 61 HOH HOH . 
E 5 HOH A 49 449 39 HOH HOH . 
E 5 HOH A 50 450 29 HOH HOH . 
E 5 HOH A 51 451 75 HOH HOH . 
E 5 HOH A 52 452 35 HOH HOH . 
E 5 HOH A 53 453 58 HOH HOH . 
E 5 HOH A 54 454 42 HOH HOH . 
E 5 HOH A 55 455 76 HOH HOH . 
E 5 HOH A 56 456 51 HOH HOH . 
E 5 HOH A 57 457 57 HOH HOH . 
E 5 HOH A 58 458 41 HOH HOH . 
E 5 HOH A 59 459 48 HOH HOH . 
E 5 HOH A 60 460 47 HOH HOH . 
E 5 HOH A 61 461 72 HOH HOH . 
E 5 HOH A 62 462 56 HOH HOH . 
E 5 HOH A 63 463 74 HOH HOH . 
E 5 HOH A 64 464 12 HOH HOH . 
E 5 HOH A 65 465 55 HOH HOH . 
F 5 HOH B 1 201 52 HOH HOH . 
F 5 HOH B 2 202 68 HOH HOH . 
F 5 HOH B 3 203 64 HOH HOH . 
F 5 HOH B 4 204 70 HOH HOH . 
F 5 HOH B 5 205 67 HOH HOH . 
F 5 HOH B 6 206 54 HOH HOH . 
F 5 HOH B 7 207 45 HOH HOH . 
F 5 HOH B 8 208 66 HOH HOH . 
F 5 HOH B 9 209 65 HOH HOH . 
F 5 HOH B 10 210 62 HOH HOH . 
F 5 HOH B 11 211 63 HOH HOH . 
F 5 HOH B 12 212 69 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O23 PNS . . . C 3 45.501 70.881 49.379 1 46.89 ? O23 PNS 101 B 1 
HETATM 2 P P24 PNS . . . C 3 46.217 69.582 49.194 1 44.15 ? P24 PNS 101 B 1 
HETATM 3 O O26 PNS . . . C 3 45.308 68.406 49.372 1 42.36 ? O26 PNS 101 B 1 
HETATM 4 O O27 PNS . . . C 3 47.324 69.453 50.348 1 47.94 ? O27 PNS 101 B 1 
HETATM 5 C C28 PNS . . . C 3 47.953 70.603 50.854 1 50.58 ? C28 PNS 101 B 1 
HETATM 6 C C29 PNS . . . C 3 48.886 70.121 51.957 1 51.42 ? C29 PNS 101 B 1 
HETATM 7 C C30 PNS . . . C 3 49.552 68.815 51.521 1 45.81 ? C30 PNS 101 B 1 
HETATM 8 C C31 PNS . . . C 3 49.904 71.231 52.199 1 50.51 ? C31 PNS 101 B 1 
HETATM 9 C C32 PNS . . . C 3 48.095 69.885 53.233 1 48.62 ? C32 PNS 101 B 1 
HETATM 10 O O33 PNS . . . C 3 48.875 69.163 54.188 1 49.09 ? O33 PNS 101 B 1 
HETATM 11 C C34 PNS . . . C 3 47.718 71.202 53.829 1 49.48 ? C34 PNS 101 B 1 
HETATM 12 O O35 PNS . . . C 3 46.806 71.854 53.37 1 53.07 ? O35 PNS 101 B 1 
HETATM 13 N N36 PNS . . . C 3 48.272 71.549 54.961 1 53.61 ? N36 PNS 101 B 1 
HETATM 14 C C37 PNS . . . C 3 47.443 72.297 55.891 1 55.6 ? C37 PNS 101 B 1 
HETATM 15 C C38 PNS . . . C 3 47.966 73.691 56.067 1 56.5 ? C38 PNS 101 B 1 
HETATM 16 C C39 PNS . . . C 3 46.978 74.54 56.824 1 59.4 ? C39 PNS 101 B 1 
HETATM 17 O O40 PNS . . . C 3 46.122 75.174 56.229 1 64.34 ? O40 PNS 101 B 1 
HETATM 18 N N41 PNS . . . C 3 47.147 74.654 58.135 1 64.68 ? N41 PNS 101 B 1 
HETATM 19 C C42 PNS . . . C 3 46.442 75.714 58.838 1 66.18 ? C42 PNS 101 B 1 
HETATM 20 C C43 PNS . . . C 3 46.953 76.006 60.241 1 71.71 ? C43 PNS 101 B 1 
HETATM 21 S S44 PNS . . . C 3 46.743 74.566 61.297 1 75.95 ? S44 PNS 101 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           21 
#