data_5D1B # _model_server_result.job_id bN0VQ2S7wGs9oBuC6KAoCA _model_server_result.datetime_utc '2024-11-13 07:59:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5d1b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 5D1B # _exptl.entry_id 5D1B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.77 _cell.angle_gamma 90 _cell.entry_id 5D1B _cell.length_a 52.197 _cell.length_b 83.031 _cell.length_c 98.46 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5D1B _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 176 A ASP 176 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? metalc ? metalc2 A OD1 ASP 176 A ASP 176 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc3 A OD2 ASP 178 A ASP 178 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc4 A O ASP 178 A ASP 178 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? metalc ? metalc5 A ND1 HIS 180 A HIS 180 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc6 A O HIS 180 A HIS 180 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc7 A O PHE 189 A PHE 189 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc8 A O THR 192 A THR 192 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.1 ? metalc ? metalc9 A O VAL 195 A VAL 195 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc10 A OG SER 199 A SER 199 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.875 ? metalc ? metalc11 A O LEU 200 A LEU 200 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc12 A O TYR 225 A TYR 225 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? metalc ? metalc13 A OD2 ASP 267 A ASP 267 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc14 C ZN ZN . A ZN 401 1_555 F O2 TSN . A TSN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc15 C ZN ZN . A ZN 401 1_555 F O1 TSN . A TSN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc16 B O ASP 176 B ASP 176 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? metalc ? metalc17 B OD1 ASP 176 B ASP 176 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc18 B OD2 ASP 178 B ASP 178 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc19 B O ASP 178 B ASP 178 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc20 B ND1 HIS 180 B HIS 180 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc21 B O HIS 180 B HIS 180 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.111 ? metalc ? metalc22 B O PHE 189 B PHE 189 1_555 I K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc23 B O THR 192 B THR 192 1_555 I K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.275 ? metalc ? metalc24 B O VAL 195 B VAL 195 1_555 I K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc25 B OG SER 199 B SER 199 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.143 ? metalc ? metalc26 B O LEU 200 B LEU 200 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc27 B O TYR 225 B TYR 225 1_555 I K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc28 B OD2 ASP 267 B ASP 267 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc29 G ZN ZN . B ZN 401 1_555 J O1 TSN . B TSN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc30 G ZN ZN . B ZN 401 1_555 J O2 TSN . B TSN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc31 I K K . B K 403 1_555 L O HOH . B HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.953 ? metalc ? metalc32 I K K . B K 403 1_555 L O HOH . B HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.9 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5D1B _atom_sites.fract_transf_matrix[1][1] 0.019158 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004341 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012044 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010414 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 401 ZN ZN . D 3 K A 1 402 411 K K . E 3 K A 1 403 412 K K . F 4 TSN A 1 404 500 TSN TSN . G 2 ZN B 1 401 401 ZN ZN . H 3 K B 1 402 411 K K . I 3 K B 1 403 412 K K . J 4 TSN B 1 404 500 TSN TSN . K 5 HOH A 1 501 6 HOH HOH . K 5 HOH A 2 502 3 HOH HOH . K 5 HOH A 3 503 9 HOH HOH . K 5 HOH A 4 504 10 HOH HOH . K 5 HOH A 5 505 8 HOH HOH . L 5 HOH B 1 501 1 HOH HOH . L 5 HOH B 2 502 2 HOH HOH . L 5 HOH B 3 503 18 HOH HOH . L 5 HOH B 4 504 5 HOH HOH . L 5 HOH B 5 505 11 HOH HOH . L 5 HOH B 6 506 14 HOH HOH . L 5 HOH B 7 507 15 HOH HOH . L 5 HOH B 8 508 12 HOH HOH . L 5 HOH B 9 509 16 HOH HOH . L 5 HOH B 10 510 13 HOH HOH . L 5 HOH B 11 511 4 HOH HOH . L 5 HOH B 12 512 17 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -11.163 _atom_site.Cartn_y 18.215 _atom_site.Cartn_z -2.064 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #