data_5D1W
#
_model_server_result.job_id            DLw6QZ_E3mb5gnUWRCzu2A 
_model_server_result.datetime_utc      '2024-11-05 01:17:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5d1w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":301}' 
#
_entry.id    5D1W 
#
_exptl.entry_id    5D1W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          121.55 
_cell.angle_gamma         90 
_cell.entry_id            5D1W 
_cell.length_a            234.048 
_cell.length_b            75.493 
_cell.length_c            125.361 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5D1W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H 1 1 
C,D,I,J 2 1 
E,F 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 258 n n 
C1 O2 PLM doub 259 n n 
C1 C2 PLM sing 260 n n 
O1 H PLM sing 261 n n 
C2 C3 PLM sing 262 n n 
C2 H21 PLM sing 263 n n 
C2 H22 PLM sing 264 n n 
C3 C4 PLM sing 265 n n 
C3 H31 PLM sing 266 n n 
C3 H32 PLM sing 267 n n 
C4 C5 PLM sing 268 n n 
C4 H41 PLM sing 269 n n 
C4 H42 PLM sing 270 n n 
C5 C6 PLM sing 271 n n 
C5 H51 PLM sing 272 n n 
C5 H52 PLM sing 273 n n 
C6 C7 PLM sing 274 n n 
C6 H61 PLM sing 275 n n 
C6 H62 PLM sing 276 n n 
C7 C8 PLM sing 277 n n 
C7 H71 PLM sing 278 n n 
C7 H72 PLM sing 279 n n 
C8 C9 PLM sing 280 n n 
C8 H81 PLM sing 281 n n 
C8 H82 PLM sing 282 n n 
C9 CA PLM sing 283 n n 
C9 H91 PLM sing 284 n n 
C9 H92 PLM sing 285 n n 
CA CB PLM sing 286 n n 
CA HA1 PLM sing 287 n n 
CA HA2 PLM sing 288 n n 
CB CC PLM sing 289 n n 
CB HB1 PLM sing 290 n n 
CB HB2 PLM sing 291 n n 
CC CD PLM sing 292 n n 
CC HC1 PLM sing 293 n n 
CC HC2 PLM sing 294 n n 
CD CE PLM sing 295 n n 
CD HD1 PLM sing 296 n n 
CD HD2 PLM sing 297 n n 
CE CF PLM sing 298 n n 
CE HE1 PLM sing 299 n n 
CE HE2 PLM sing 300 n n 
CF CG PLM sing 301 n n 
CF HF1 PLM sing 302 n n 
CF HF2 PLM sing 303 n n 
CG HG1 PLM sing 304 n n 
CG HG2 PLM sing 305 n n 
CG HG3 PLM sing 306 n n 
#
_atom_sites.entry_id                     5D1W 
_atom_sites.fract_transf_matrix[1][1]    0.004273 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002624 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013246 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009361 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 PLM A 1 301 1 PLM LIG . 
H 2 PLM B 1 301 1 PLM LIG . 
I 2 PLM C 1 301 1 PLM LIG . 
J 2 PLM D 1 301 1 PLM LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . H 2 22.612 -43.04 5.922 1 37.95 ? C1 PLM 301 B 1 
HETATM 2 O O1 PLM . . . H 2 23.302 -43.112 6.999 1 39.24 -1 O1 PLM 301 B 1 
HETATM 3 O O2 PLM . . . H 2 21.985 -44.093 5.557 1 37 ? O2 PLM 301 B 1 
HETATM 4 C C2 PLM . . . H 2 22.536 -41.758 5.095 1 31.93 ? C2 PLM 301 B 1 
HETATM 5 C C3 PLM . . . H 2 22.814 -40.424 5.749 1 33.1 ? C3 PLM 301 B 1 
HETATM 6 C C4 PLM . . . H 2 22.93 -39.161 4.924 1 31.98 ? C4 PLM 301 B 1 
HETATM 7 C C5 PLM . . . H 2 23.077 -37.823 5.613 1 25.83 ? C5 PLM 301 B 1 
HETATM 8 C C6 PLM . . . H 2 22.691 -36.583 4.868 1 21.9 ? C6 PLM 301 B 1 
HETATM 9 C C7 PLM . . . H 2 23.085 -35.232 5.388 1 22.49 ? C7 PLM 301 B 1 
HETATM 10 C C8 PLM . . . H 2 23.843 -34.365 4.415 1 24.14 ? C8 PLM 301 B 1 
HETATM 11 C C9 PLM . . . H 2 23.926 -32.858 4.432 1 20.6 ? C9 PLM 301 B 1 
HETATM 12 C CA PLM . . . H 2 24.236 -32.289 3.074 1 17.13 ? CA PLM 301 B 1 
HETATM 13 C CB PLM . . . H 2 24.41 -30.828 2.84 1 15.41 ? CB PLM 301 B 1 
HETATM 14 C CC PLM . . . H 2 24.376 -30.374 1.411 1 16.43 ? CC PLM 301 B 1 
HETATM 15 C CD PLM . . . H 2 24.639 -28.919 1.109 1 19.81 ? CD PLM 301 B 1 
HETATM 16 C CE PLM . . . H 2 24.515 -28.401 -0.31 1 19.91 ? CE PLM 301 B 1 
HETATM 17 C CF PLM . . . H 2 25.222 -27.129 -0.727 1 16.03 ? CF PLM 301 B 1 
HETATM 18 C CG PLM . . . H 2 25.378 -26.801 -2.184 1 13.16 ? CG PLM 301 B 1 
HETATM 19 H H21 PLM . . . H 2 23.169 -41.855 4.365 1 38.32 ? H21 PLM 301 B 1 
HETATM 20 H H22 PLM . . . H 2 21.646 -41.712 4.707 1 38.32 ? H22 PLM 301 B 1 
HETATM 21 H H31 PLM . . . H 2 23.647 -40.516 6.241 1 39.72 ? H31 PLM 301 B 1 
HETATM 22 H H32 PLM . . . H 2 22.108 -40.276 6.4 1 39.72 ? H32 PLM 301 B 1 
HETATM 23 H H41 PLM . . . H 2 23.691 -39.27 4.329 1 38.38 ? H41 PLM 301 B 1 
HETATM 24 H H42 PLM . . . H 2 22.132 -39.109 4.371 1 38.38 ? H42 PLM 301 B 1 
HETATM 25 H H51 PLM . . . H 2 22.54 -37.853 6.423 1 31 ? H51 PLM 301 B 1 
HETATM 26 H H52 PLM . . . H 2 24.007 -37.729 5.877 1 31 ? H52 PLM 301 B 1 
HETATM 27 H H61 PLM . . . H 2 23.041 -36.66 3.964 1 26.28 ? H61 PLM 301 B 1 
HETATM 28 H H62 PLM . . . H 2 21.721 -36.586 4.803 1 26.28 ? H62 PLM 301 B 1 
HETATM 29 H H71 PLM . . . H 2 22.282 -34.756 5.659 1 26.99 ? H71 PLM 301 B 1 
HETATM 30 H H72 PLM . . . H 2 23.638 -35.359 6.177 1 26.99 ? H72 PLM 301 B 1 
HETATM 31 H H81 PLM . . . H 2 24.76 -34.685 4.429 1 28.97 ? H81 PLM 301 B 1 
HETATM 32 H H82 PLM . . . H 2 23.487 -34.591 3.54 1 28.97 ? H82 PLM 301 B 1 
HETATM 33 H H91 PLM . . . H 2 23.072 -32.504 4.73 1 24.72 ? H91 PLM 301 B 1 
HETATM 34 H H92 PLM . . . H 2 24.618 -32.584 5.058 1 24.72 ? H92 PLM 301 B 1 
HETATM 35 H HA1 PLM . . . H 2 25.049 -32.724 2.766 1 20.55 ? HA1 PLM 301 B 1 
HETATM 36 H HA2 PLM . . . H 2 23.518 -32.577 2.486 1 20.55 ? HA2 PLM 301 B 1 
HETATM 37 H HB1 PLM . . . H 2 25.261 -30.558 3.224 1 18.5 ? HB1 PLM 301 B 1 
HETATM 38 H HB2 PLM . . . H 2 23.701 -30.365 3.316 1 18.5 ? HB2 PLM 301 B 1 
HETATM 39 H HC1 PLM . . . H 2 25.031 -30.9 0.921 1 19.71 ? HC1 PLM 301 B 1 
HETATM 40 H HC2 PLM . . . H 2 23.497 -30.591 1.056 1 19.71 ? HC2 PLM 301 B 1 
HETATM 41 H HD1 PLM . . . H 2 24.039 -28.393 1.664 1 23.78 ? HD1 PLM 301 B 1 
HETATM 42 H HD2 PLM . . . H 2 25.547 -28.73 1.4 1 23.78 ? HD2 PLM 301 B 1 
HETATM 43 H HE1 PLM . . . H 2 24.844 -29.106 -0.893 1 23.89 ? HE1 PLM 301 B 1 
HETATM 44 H HE2 PLM . . . H 2 23.568 -28.285 -0.499 1 23.89 ? HE2 PLM 301 B 1 
HETATM 45 H HF1 PLM . . . H 2 26.116 -27.164 -0.348 1 19.23 ? HF1 PLM 301 B 1 
HETATM 46 H HF2 PLM . . . H 2 24.755 -26.386 -0.308 1 19.23 ? HF2 PLM 301 B 1 
HETATM 47 H HG1 PLM . . . H 2 24.541 -26.436 -2.526 1 15.79 ? HG1 PLM 301 B 1 
HETATM 48 H HG2 PLM . . . H 2 26.088 -26.143 -2.295 1 15.79 ? HG2 PLM 301 B 1 
HETATM 49 H HG3 PLM . . . H 2 25.605 -27.61 -2.677 1 15.79 ? HG3 PLM 301 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           49 
#