data_5D1W
#
_model_server_result.job_id            nEDDlIDwKc2_xcJp48L3xg 
_model_server_result.datetime_utc      '2024-11-05 01:18:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5d1w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":301}' 
#
_entry.id    5D1W 
#
_exptl.entry_id    5D1W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          121.55 
_cell.angle_gamma         90 
_cell.entry_id            5D1W 
_cell.length_a            234.048 
_cell.length_b            75.493 
_cell.length_c            125.361 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5D1W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H 1 1 
C,D,I,J 2 1 
E,F 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 258 n n 
C1 O2 PLM doub 259 n n 
C1 C2 PLM sing 260 n n 
O1 H PLM sing 261 n n 
C2 C3 PLM sing 262 n n 
C2 H21 PLM sing 263 n n 
C2 H22 PLM sing 264 n n 
C3 C4 PLM sing 265 n n 
C3 H31 PLM sing 266 n n 
C3 H32 PLM sing 267 n n 
C4 C5 PLM sing 268 n n 
C4 H41 PLM sing 269 n n 
C4 H42 PLM sing 270 n n 
C5 C6 PLM sing 271 n n 
C5 H51 PLM sing 272 n n 
C5 H52 PLM sing 273 n n 
C6 C7 PLM sing 274 n n 
C6 H61 PLM sing 275 n n 
C6 H62 PLM sing 276 n n 
C7 C8 PLM sing 277 n n 
C7 H71 PLM sing 278 n n 
C7 H72 PLM sing 279 n n 
C8 C9 PLM sing 280 n n 
C8 H81 PLM sing 281 n n 
C8 H82 PLM sing 282 n n 
C9 CA PLM sing 283 n n 
C9 H91 PLM sing 284 n n 
C9 H92 PLM sing 285 n n 
CA CB PLM sing 286 n n 
CA HA1 PLM sing 287 n n 
CA HA2 PLM sing 288 n n 
CB CC PLM sing 289 n n 
CB HB1 PLM sing 290 n n 
CB HB2 PLM sing 291 n n 
CC CD PLM sing 292 n n 
CC HC1 PLM sing 293 n n 
CC HC2 PLM sing 294 n n 
CD CE PLM sing 295 n n 
CD HD1 PLM sing 296 n n 
CD HD2 PLM sing 297 n n 
CE CF PLM sing 298 n n 
CE HE1 PLM sing 299 n n 
CE HE2 PLM sing 300 n n 
CF CG PLM sing 301 n n 
CF HF1 PLM sing 302 n n 
CF HF2 PLM sing 303 n n 
CG HG1 PLM sing 304 n n 
CG HG2 PLM sing 305 n n 
CG HG3 PLM sing 306 n n 
#
_atom_sites.entry_id                     5D1W 
_atom_sites.fract_transf_matrix[1][1]    0.004273 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002624 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013246 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009361 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 PLM A 1 301 1 PLM LIG . 
H 2 PLM B 1 301 1 PLM LIG . 
I 2 PLM C 1 301 1 PLM LIG . 
J 2 PLM D 1 301 1 PLM LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . I 2 6.132 -61.679 -34.307 1 66.01 ? C1 PLM 301 C 1 
HETATM 2 O O1 PLM . . . I 2 6.705 -62.793 -34.516 1 61.32 -1 O1 PLM 301 C 1 
HETATM 3 O O2 PLM . . . I 2 6.207 -60.749 -35.169 1 68.14 ? O2 PLM 301 C 1 
HETATM 4 C C2 PLM . . . I 2 5.368 -61.465 -33.032 1 64 ? C2 PLM 301 C 1 
HETATM 5 C C3 PLM . . . I 2 4.98 -62.689 -32.269 1 58.58 ? C3 PLM 301 C 1 
HETATM 6 C C4 PLM . . . I 2 4.513 -62.527 -30.869 1 47.53 ? C4 PLM 301 C 1 
HETATM 7 C C5 PLM . . . I 2 4.737 -63.695 -29.982 1 38.4 ? C5 PLM 301 C 1 
HETATM 8 C C6 PLM . . . I 2 4.191 -63.532 -28.619 1 37.89 ? C6 PLM 301 C 1 
HETATM 9 C C7 PLM . . . I 2 4.547 -64.52 -27.557 1 37.29 ? C7 PLM 301 C 1 
HETATM 10 C C8 PLM . . . I 2 4.682 -63.948 -26.176 1 38.17 ? C8 PLM 301 C 1 
HETATM 11 C C9 PLM . . . I 2 4.022 -64.572 -24.987 1 34.79 ? C9 PLM 301 C 1 
HETATM 12 C CA PLM . . . I 2 3.855 -63.667 -23.809 1 29.46 ? CA PLM 301 C 1 
HETATM 13 C CB PLM . . . I 2 3.53 -64.273 -22.489 1 26.38 ? CB PLM 301 C 1 
HETATM 14 C CC PLM . . . I 2 3.534 -63.347 -21.323 1 25.87 ? CC PLM 301 C 1 
HETATM 15 C CD PLM . . . I 2 2.409 -62.384 -21.146 1 24.34 ? CD PLM 301 C 1 
HETATM 16 C CE PLM . . . I 2 2.297 -61.617 -19.865 1 22.82 ? CE PLM 301 C 1 
HETATM 17 C CF PLM . . . I 2 2.777 -62.205 -18.577 1 19.94 ? CF PLM 301 C 1 
HETATM 18 C CG PLM . . . I 2 2.261 -61.626 -17.301 1 18.45 ? CG PLM 301 C 1 
HETATM 19 H H21 PLM . . . I 2 5.923 -60.92 -32.449 1 76.81 ? H21 PLM 301 C 1 
HETATM 20 H H22 PLM . . . I 2 4.561 -60.963 -33.237 1 76.81 ? H22 PLM 301 C 1 
HETATM 21 H H31 PLM . . . I 2 5.76 -63.269 -32.244 1 70.3 ? H31 PLM 301 C 1 
HETATM 22 H H32 PLM . . . I 2 4.284 -63.149 -32.769 1 70.3 ? H32 PLM 301 C 1 
HETATM 23 H H41 PLM . . . I 2 4.984 -61.768 -30.485 1 57.04 ? H41 PLM 301 C 1 
HETATM 24 H H42 PLM . . . I 2 3.562 -62.323 -30.88 1 57.04 ? H42 PLM 301 C 1 
HETATM 25 H H51 PLM . . . I 2 4.326 -64.476 -30.39 1 46.08 ? H51 PLM 301 C 1 
HETATM 26 H H52 PLM . . . I 2 5.694 -63.849 -29.911 1 46.08 ? H52 PLM 301 C 1 
HETATM 27 H H61 PLM . . . I 2 4.448 -62.652 -28.297 1 45.46 ? H61 PLM 301 C 1 
HETATM 28 H H62 PLM . . . I 2 3.222 -63.539 -28.697 1 45.46 ? H62 PLM 301 C 1 
HETATM 29 H H71 PLM . . . I 2 3.875 -65.223 -27.54 1 44.75 ? H71 PLM 301 C 1 
HETATM 30 H H72 PLM . . . I 2 5.399 -64.922 -27.796 1 44.75 ? H72 PLM 301 C 1 
HETATM 31 H H81 PLM . . . I 2 5.633 -63.913 -25.98 1 45.8 ? H81 PLM 301 C 1 
HETATM 32 H H82 PLM . . . I 2 4.366 -63.03 -26.222 1 45.8 ? H82 PLM 301 C 1 
HETATM 33 H H91 PLM . . . I 2 3.143 -64.886 -25.256 1 41.75 ? H91 PLM 301 C 1 
HETATM 34 H H92 PLM . . . I 2 4.552 -65.339 -24.711 1 41.75 ? H92 PLM 301 C 1 
HETATM 35 H HA1 PLM . . . I 2 4.686 -63.174 -23.705 1 35.35 ? HA1 PLM 301 C 1 
HETATM 36 H HA2 PLM . . . I 2 3.155 -63.027 -24.021 1 35.35 ? HA2 PLM 301 C 1 
HETATM 37 H HB1 PLM . . . I 2 4.16 -64.992 -22.311 1 31.66 ? HB1 PLM 301 C 1 
HETATM 38 H HB2 PLM . . . I 2 2.641 -64.659 -22.56 1 31.66 ? HB2 PLM 301 C 1 
HETATM 39 H HC1 PLM . . . I 2 3.566 -63.899 -20.523 1 31.05 ? HC1 PLM 301 C 1 
HETATM 40 H HC2 PLM . . . I 2 4.357 -62.832 -21.358 1 31.05 ? HC2 PLM 301 C 1 
HETATM 41 H HD1 PLM . . . I 2 2.473 -61.736 -21.867 1 29.21 ? HD1 PLM 301 C 1 
HETATM 42 H HD2 PLM . . . I 2 1.579 -62.875 -21.264 1 29.21 ? HD2 PLM 301 C 1 
HETATM 43 H HE1 PLM . . . I 2 2.777 -60.781 -19.989 1 27.39 ? HE1 PLM 301 C 1 
HETATM 44 H HE2 PLM . . . I 2 1.357 -61.398 -19.747 1 27.39 ? HE2 PLM 301 C 1 
HETATM 45 H HF1 PLM . . . I 2 3.747 -62.139 -18.563 1 23.93 ? HF1 PLM 301 C 1 
HETATM 46 H HF2 PLM . . . I 2 2.543 -63.149 -18.582 1 23.93 ? HF2 PLM 301 C 1 
HETATM 47 H HG1 PLM . . . I 2 1.367 -61.97 -17.127 1 22.14 ? HG1 PLM 301 C 1 
HETATM 48 H HG2 PLM . . . I 2 2.853 -61.875 -16.569 1 22.14 ? HG2 PLM 301 C 1 
HETATM 49 H HG3 PLM . . . I 2 2.227 -60.656 -17.376 1 22.14 ? HG3 PLM 301 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           236 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           49 
#