data_5D3Q # _model_server_result.job_id sWE-XAEhlCqOutf0LO5AJA _model_server_result.datetime_utc '2024-12-03 00:28:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5d3q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":801}' # _entry.id 5D3Q # _exptl.entry_id 5D3Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 99.4 _cell.angle_beta 87.18 _cell.angle_gamma 105.18 _cell.entry_id 5D3Q _cell.length_a 44.22 _cell.length_b 49.96 _cell.length_c 82.52 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5D3Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 92 n n PB O2B GDP sing 93 n n PB O3B GDP sing 94 n n PB O3A GDP sing 95 n n O2B HOB2 GDP sing 96 n n O3B HOB3 GDP sing 97 n n O3A PA GDP sing 98 n n PA O1A GDP doub 99 n n PA O2A GDP sing 100 n n PA O5' GDP sing 101 n n O2A HOA2 GDP sing 102 n n O5' C5' GDP sing 103 n n C5' C4' GDP sing 104 n n C5' H5' GDP sing 105 n n C5' "H5''" GDP sing 106 n n C4' O4' GDP sing 107 n n C4' C3' GDP sing 108 n n C4' H4' GDP sing 109 n n O4' C1' GDP sing 110 n n C3' O3' GDP sing 111 n n C3' C2' GDP sing 112 n n C3' H3' GDP sing 113 n n O3' HO3' GDP sing 114 n n C2' O2' GDP sing 115 n n C2' C1' GDP sing 116 n n C2' H2' GDP sing 117 n n O2' HO2' GDP sing 118 n n C1' N9 GDP sing 119 n n C1' H1' GDP sing 120 n n N9 C8 GDP sing 121 n y N9 C4 GDP sing 122 n y C8 N7 GDP doub 123 n y C8 H8 GDP sing 124 n n N7 C5 GDP sing 125 n y C5 C6 GDP sing 126 n n C5 C4 GDP doub 127 n y C6 O6 GDP doub 128 n n C6 N1 GDP sing 129 n n N1 C2 GDP sing 130 n n N1 HN1 GDP sing 131 n n C2 N2 GDP sing 132 n n C2 N3 GDP doub 133 n n N2 HN21 GDP sing 134 n n N2 HN22 GDP sing 135 n n N3 C4 GDP sing 136 n n # _atom_sites.entry_id 5D3Q _atom_sites.fract_transf_matrix[1][1] 0.022614 _atom_sites.fract_transf_matrix[1][2] 0.006136 _atom_sites.fract_transf_matrix[1][3] -0.000157 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02074 _atom_sites.fract_transf_matrix[2][3] 0.003276 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012283 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GDP A 1 801 1744 GDP GDP . D 3 EDO A 1 802 302 EDO EDO . E 2 GDP B 1 801 1744 GDP GDP . F 3 EDO B 1 802 300 EDO EDO . G 4 HOH A 1 901 651 HOH HOH . G 4 HOH A 2 902 419 HOH HOH . G 4 HOH A 3 903 672 HOH HOH . G 4 HOH A 4 904 610 HOH HOH . G 4 HOH A 5 905 396 HOH HOH . G 4 HOH A 6 906 710 HOH HOH . G 4 HOH A 7 907 371 HOH HOH . G 4 HOH A 8 908 548 HOH HOH . G 4 HOH A 9 909 623 HOH HOH . G 4 HOH A 10 910 326 HOH HOH . G 4 HOH A 11 911 175 HOH HOH . G 4 HOH A 12 912 65 HOH HOH . G 4 HOH A 13 913 575 HOH HOH . G 4 HOH A 14 914 543 HOH HOH . G 4 HOH A 15 915 608 HOH HOH . G 4 HOH A 16 916 375 HOH HOH . G 4 HOH A 17 917 314 HOH HOH . G 4 HOH A 18 918 179 HOH HOH . G 4 HOH A 19 919 606 HOH HOH . G 4 HOH A 20 920 174 HOH HOH . G 4 HOH A 21 921 230 HOH HOH . G 4 HOH A 22 922 138 HOH HOH . G 4 HOH A 23 923 355 HOH HOH . G 4 HOH A 24 924 144 HOH HOH . G 4 HOH A 25 925 706 HOH HOH . G 4 HOH A 26 926 380 HOH HOH . G 4 HOH A 27 927 235 HOH HOH . G 4 HOH A 28 928 207 HOH HOH . G 4 HOH A 29 929 325 HOH HOH . G 4 HOH A 30 930 100 HOH HOH . G 4 HOH A 31 931 665 HOH HOH . G 4 HOH A 32 932 674 HOH HOH . G 4 HOH A 33 933 242 HOH HOH . G 4 HOH A 34 934 140 HOH HOH . G 4 HOH A 35 935 260 HOH HOH . G 4 HOH A 36 936 276 HOH HOH . G 4 HOH A 37 937 305 HOH HOH . G 4 HOH A 38 938 115 HOH HOH . G 4 HOH A 39 939 33 HOH HOH . G 4 HOH A 40 940 19 HOH HOH . G 4 HOH A 41 941 178 HOH HOH . G 4 HOH A 42 942 439 HOH HOH . G 4 HOH A 43 943 406 HOH HOH . G 4 HOH A 44 944 451 HOH HOH . G 4 HOH A 45 945 49 HOH HOH . G 4 HOH A 46 946 385 HOH HOH . G 4 HOH A 47 947 272 HOH HOH . G 4 HOH A 48 948 88 HOH HOH . G 4 HOH A 49 949 183 HOH HOH . G 4 HOH A 50 950 128 HOH HOH . G 4 HOH A 51 951 63 HOH HOH . G 4 HOH A 52 952 477 HOH HOH . G 4 HOH A 53 953 670 HOH HOH . G 4 HOH A 54 954 126 HOH HOH . G 4 HOH A 55 955 198 HOH HOH . G 4 HOH A 56 956 369 HOH HOH . G 4 HOH A 57 957 27 HOH HOH . G 4 HOH A 58 958 692 HOH HOH . G 4 HOH A 59 959 320 HOH HOH . G 4 HOH A 60 960 172 HOH HOH . G 4 HOH A 61 961 89 HOH HOH . G 4 HOH A 62 962 2 HOH HOH . G 4 HOH A 63 963 238 HOH HOH . G 4 HOH A 64 964 137 HOH HOH . G 4 HOH A 65 965 168 HOH HOH . G 4 HOH A 66 966 108 HOH HOH . G 4 HOH A 67 967 45 HOH HOH . G 4 HOH A 68 968 55 HOH HOH . G 4 HOH A 69 969 154 HOH HOH . G 4 HOH A 70 970 459 HOH HOH . G 4 HOH A 71 971 335 HOH HOH . G 4 HOH A 72 972 479 HOH HOH . G 4 HOH A 73 973 93 HOH HOH . G 4 HOH A 74 974 46 HOH HOH . G 4 HOH A 75 975 119 HOH HOH . G 4 HOH A 76 976 279 HOH HOH . G 4 HOH A 77 977 506 HOH HOH . G 4 HOH A 78 978 237 HOH HOH . G 4 HOH A 79 979 164 HOH HOH . G 4 HOH A 80 980 71 HOH HOH . G 4 HOH A 81 981 218 HOH HOH . G 4 HOH A 82 982 317 HOH HOH . G 4 HOH A 83 983 78 HOH HOH . G 4 HOH A 84 984 10 HOH HOH . G 4 HOH A 85 985 232 HOH HOH . G 4 HOH A 86 986 267 HOH HOH . G 4 HOH A 87 987 21 HOH HOH . G 4 HOH A 88 988 187 HOH HOH . G 4 HOH A 89 989 241 HOH HOH . G 4 HOH A 90 990 301 HOH HOH . G 4 HOH A 91 991 118 HOH HOH . G 4 HOH A 92 992 682 HOH HOH . G 4 HOH A 93 993 117 HOH HOH . G 4 HOH A 94 994 8 HOH HOH . G 4 HOH A 95 995 64 HOH HOH . G 4 HOH A 96 996 142 HOH HOH . G 4 HOH A 97 997 323 HOH HOH . G 4 HOH A 98 998 24 HOH HOH . G 4 HOH A 99 999 129 HOH HOH . G 4 HOH A 100 1000 85 HOH HOH . G 4 HOH A 101 1001 532 HOH HOH . G 4 HOH A 102 1002 43 HOH HOH . G 4 HOH A 103 1003 210 HOH HOH . G 4 HOH A 104 1004 252 HOH HOH . G 4 HOH A 105 1005 133 HOH HOH . G 4 HOH A 106 1006 684 HOH HOH . G 4 HOH A 107 1007 32 HOH HOH . G 4 HOH A 108 1008 22 HOH HOH . G 4 HOH A 109 1009 152 HOH HOH . G 4 HOH A 110 1010 77 HOH HOH . G 4 HOH A 111 1011 297 HOH HOH . G 4 HOH A 112 1012 208 HOH HOH . G 4 HOH A 113 1013 66 HOH HOH . G 4 HOH A 114 1014 86 HOH HOH . G 4 HOH A 115 1015 68 HOH HOH . G 4 HOH A 116 1016 91 HOH HOH . G 4 HOH A 117 1017 510 HOH HOH . G 4 HOH A 118 1018 79 HOH HOH . G 4 HOH A 119 1019 153 HOH HOH . G 4 HOH A 120 1020 158 HOH HOH . G 4 HOH A 121 1021 339 HOH HOH . G 4 HOH A 122 1022 74 HOH HOH . G 4 HOH A 123 1023 430 HOH HOH . G 4 HOH A 124 1024 626 HOH HOH . G 4 HOH A 125 1025 695 HOH HOH . G 4 HOH A 126 1026 708 HOH HOH . G 4 HOH A 127 1027 80 HOH HOH . G 4 HOH A 128 1028 136 HOH HOH . G 4 HOH A 129 1029 28 HOH HOH . G 4 HOH A 130 1030 248 HOH HOH . G 4 HOH A 131 1031 299 HOH HOH . G 4 HOH A 132 1032 149 HOH HOH . G 4 HOH A 133 1033 15 HOH HOH . G 4 HOH A 134 1034 1 HOH HOH . G 4 HOH A 135 1035 601 HOH HOH . G 4 HOH A 136 1036 461 HOH HOH . G 4 HOH A 137 1037 48 HOH HOH . G 4 HOH A 138 1038 336 HOH HOH . G 4 HOH A 139 1039 596 HOH HOH . G 4 HOH A 140 1040 420 HOH HOH . G 4 HOH A 141 1041 662 HOH HOH . G 4 HOH A 142 1042 581 HOH HOH . G 4 HOH A 143 1043 159 HOH HOH . G 4 HOH A 144 1044 57 HOH HOH . G 4 HOH A 145 1045 444 HOH HOH . G 4 HOH A 146 1046 37 HOH HOH . G 4 HOH A 147 1047 11 HOH HOH . G 4 HOH A 148 1048 562 HOH HOH . G 4 HOH A 149 1049 367 HOH HOH . G 4 HOH A 150 1050 418 HOH HOH . G 4 HOH A 151 1051 370 HOH HOH . G 4 HOH A 152 1052 274 HOH HOH . G 4 HOH A 153 1053 703 HOH HOH . G 4 HOH A 154 1054 44 HOH HOH . G 4 HOH A 155 1055 99 HOH HOH . G 4 HOH A 156 1056 497 HOH HOH . G 4 HOH A 157 1057 434 HOH HOH . G 4 HOH A 158 1058 51 HOH HOH . G 4 HOH A 159 1059 271 HOH HOH . G 4 HOH A 160 1060 471 HOH HOH . G 4 HOH A 161 1061 67 HOH HOH . G 4 HOH A 162 1062 31 HOH HOH . G 4 HOH A 163 1063 342 HOH HOH . G 4 HOH A 164 1064 709 HOH HOH . G 4 HOH A 165 1065 587 HOH HOH . G 4 HOH A 166 1066 70 HOH HOH . G 4 HOH A 167 1067 377 HOH HOH . G 4 HOH A 168 1068 250 HOH HOH . G 4 HOH A 169 1069 12 HOH HOH . G 4 HOH A 170 1070 143 HOH HOH . G 4 HOH A 171 1071 76 HOH HOH . G 4 HOH A 172 1072 649 HOH HOH . G 4 HOH A 173 1073 472 HOH HOH . G 4 HOH A 174 1074 92 HOH HOH . G 4 HOH A 175 1075 405 HOH HOH . G 4 HOH A 176 1076 309 HOH HOH . G 4 HOH A 177 1077 167 HOH HOH . G 4 HOH A 178 1078 365 HOH HOH . G 4 HOH A 179 1079 393 HOH HOH . G 4 HOH A 180 1080 466 HOH HOH . G 4 HOH A 181 1081 388 HOH HOH . G 4 HOH A 182 1082 257 HOH HOH . G 4 HOH A 183 1083 658 HOH HOH . G 4 HOH A 184 1084 106 HOH HOH . G 4 HOH A 185 1085 611 HOH HOH . G 4 HOH A 186 1086 105 HOH HOH . G 4 HOH A 187 1087 82 HOH HOH . G 4 HOH A 188 1088 399 HOH HOH . G 4 HOH A 189 1089 358 HOH HOH . G 4 HOH A 190 1090 107 HOH HOH . G 4 HOH A 191 1091 103 HOH HOH . G 4 HOH A 192 1092 374 HOH HOH . G 4 HOH A 193 1093 94 HOH HOH . G 4 HOH A 194 1094 438 HOH HOH . G 4 HOH A 195 1095 285 HOH HOH . G 4 HOH A 196 1096 445 HOH HOH . G 4 HOH A 197 1097 421 HOH HOH . G 4 HOH A 198 1098 151 HOH HOH . G 4 HOH A 199 1099 209 HOH HOH . G 4 HOH A 200 1100 278 HOH HOH . G 4 HOH A 201 1101 683 HOH HOH . G 4 HOH A 202 1102 186 HOH HOH . G 4 HOH A 203 1103 378 HOH HOH . G 4 HOH A 204 1104 72 HOH HOH . G 4 HOH A 205 1105 539 HOH HOH . G 4 HOH A 206 1106 467 HOH HOH . G 4 HOH A 207 1107 84 HOH HOH . G 4 HOH A 208 1108 389 HOH HOH . G 4 HOH A 209 1109 211 HOH HOH . G 4 HOH A 210 1110 295 HOH HOH . G 4 HOH A 211 1111 410 HOH HOH . G 4 HOH A 212 1112 458 HOH HOH . G 4 HOH A 213 1113 561 HOH HOH . G 4 HOH A 214 1114 700 HOH HOH . G 4 HOH A 215 1115 546 HOH HOH . G 4 HOH A 216 1116 605 HOH HOH . G 4 HOH A 217 1117 165 HOH HOH . G 4 HOH A 218 1118 551 HOH HOH . G 4 HOH A 219 1119 199 HOH HOH . G 4 HOH A 220 1120 489 HOH HOH . G 4 HOH A 221 1121 565 HOH HOH . G 4 HOH A 222 1122 512 HOH HOH . G 4 HOH A 223 1123 181 HOH HOH . G 4 HOH A 224 1124 450 HOH HOH . G 4 HOH A 225 1125 341 HOH HOH . G 4 HOH A 226 1126 629 HOH HOH . G 4 HOH A 227 1127 361 HOH HOH . G 4 HOH A 228 1128 494 HOH HOH . G 4 HOH A 229 1129 220 HOH HOH . G 4 HOH A 230 1130 441 HOH HOH . G 4 HOH A 231 1131 630 HOH HOH . G 4 HOH A 232 1132 423 HOH HOH . G 4 HOH A 233 1133 449 HOH HOH . G 4 HOH A 234 1134 155 HOH HOH . G 4 HOH A 235 1135 275 HOH HOH . G 4 HOH A 236 1136 500 HOH HOH . G 4 HOH A 237 1137 474 HOH HOH . G 4 HOH A 238 1138 463 HOH HOH . G 4 HOH A 239 1139 593 HOH HOH . G 4 HOH A 240 1140 269 HOH HOH . G 4 HOH A 241 1141 170 HOH HOH . G 4 HOH A 242 1142 454 HOH HOH . G 4 HOH A 243 1143 337 HOH HOH . G 4 HOH A 244 1144 639 HOH HOH . G 4 HOH A 245 1145 464 HOH HOH . G 4 HOH A 246 1146 390 HOH HOH . G 4 HOH A 247 1147 219 HOH HOH . G 4 HOH A 248 1148 412 HOH HOH . G 4 HOH A 249 1149 195 HOH HOH . G 4 HOH A 250 1150 622 HOH HOH . G 4 HOH A 251 1151 492 HOH HOH . G 4 HOH A 252 1152 666 HOH HOH . G 4 HOH A 253 1153 347 HOH HOH . G 4 HOH A 254 1154 437 HOH HOH . G 4 HOH A 255 1155 701 HOH HOH . G 4 HOH A 256 1156 141 HOH HOH . G 4 HOH A 257 1157 453 HOH HOH . G 4 HOH A 258 1158 643 HOH HOH . G 4 HOH A 259 1159 228 HOH HOH . G 4 HOH A 260 1160 549 HOH HOH . G 4 HOH A 261 1161 348 HOH HOH . G 4 HOH A 262 1162 673 HOH HOH . G 4 HOH A 263 1163 652 HOH HOH . G 4 HOH A 264 1164 691 HOH HOH . G 4 HOH A 265 1165 440 HOH HOH . G 4 HOH A 266 1166 675 HOH HOH . G 4 HOH A 267 1167 648 HOH HOH . G 4 HOH A 268 1168 282 HOH HOH . G 4 HOH A 269 1169 690 HOH HOH . G 4 HOH A 270 1170 636 HOH HOH . G 4 HOH A 271 1171 247 HOH HOH . G 4 HOH A 272 1172 579 HOH HOH . G 4 HOH A 273 1173 446 HOH HOH . G 4 HOH A 274 1174 384 HOH HOH . G 4 HOH A 275 1175 503 HOH HOH . G 4 HOH A 276 1176 193 HOH HOH . G 4 HOH A 277 1177 191 HOH HOH . G 4 HOH A 278 1178 478 HOH HOH . G 4 HOH A 279 1179 484 HOH HOH . G 4 HOH A 280 1180 394 HOH HOH . G 4 HOH A 281 1181 315 HOH HOH . G 4 HOH A 282 1182 224 HOH HOH . G 4 HOH A 283 1183 422 HOH HOH . G 4 HOH A 284 1184 507 HOH HOH . G 4 HOH A 285 1185 360 HOH HOH . G 4 HOH A 286 1186 677 HOH HOH . G 4 HOH A 287 1187 354 HOH HOH . G 4 HOH A 288 1188 340 HOH HOH . G 4 HOH A 289 1189 225 HOH HOH . G 4 HOH A 290 1190 572 HOH HOH . G 4 HOH A 291 1191 298 HOH HOH . G 4 HOH A 292 1192 592 HOH HOH . G 4 HOH A 293 1193 306 HOH HOH . G 4 HOH A 294 1194 196 HOH HOH . G 4 HOH A 295 1195 192 HOH HOH . G 4 HOH A 296 1196 214 HOH HOH . G 4 HOH A 297 1197 310 HOH HOH . G 4 HOH A 298 1198 448 HOH HOH . G 4 HOH A 299 1199 631 HOH HOH . G 4 HOH A 300 1200 599 HOH HOH . G 4 HOH A 301 1201 381 HOH HOH . G 4 HOH A 302 1202 509 HOH HOH . G 4 HOH A 303 1203 604 HOH HOH . G 4 HOH A 304 1204 411 HOH HOH . H 4 HOH B 1 901 414 HOH HOH . H 4 HOH B 2 902 123 HOH HOH . H 4 HOH B 3 903 707 HOH HOH . H 4 HOH B 4 904 457 HOH HOH . H 4 HOH B 5 905 523 HOH HOH . H 4 HOH B 6 906 661 HOH HOH . H 4 HOH B 7 907 161 HOH HOH . H 4 HOH B 8 908 376 HOH HOH . H 4 HOH B 9 909 687 HOH HOH . H 4 HOH B 10 910 206 HOH HOH . H 4 HOH B 11 911 122 HOH HOH . H 4 HOH B 12 912 350 HOH HOH . H 4 HOH B 13 913 131 HOH HOH . H 4 HOH B 14 914 300 HOH HOH . H 4 HOH B 15 915 217 HOH HOH . H 4 HOH B 16 916 223 HOH HOH . H 4 HOH B 17 917 391 HOH HOH . H 4 HOH B 18 918 511 HOH HOH . H 4 HOH B 19 919 537 HOH HOH . H 4 HOH B 20 920 366 HOH HOH . H 4 HOH B 21 921 132 HOH HOH . H 4 HOH B 22 922 215 HOH HOH . H 4 HOH B 23 923 109 HOH HOH . H 4 HOH B 24 924 359 HOH HOH . H 4 HOH B 25 925 542 HOH HOH . H 4 HOH B 26 926 58 HOH HOH . H 4 HOH B 27 927 515 HOH HOH . H 4 HOH B 28 928 620 HOH HOH . H 4 HOH B 29 929 627 HOH HOH . H 4 HOH B 30 930 324 HOH HOH . H 4 HOH B 31 931 35 HOH HOH . H 4 HOH B 32 932 395 HOH HOH . H 4 HOH B 33 933 256 HOH HOH . H 4 HOH B 34 934 239 HOH HOH . H 4 HOH B 35 935 308 HOH HOH . H 4 HOH B 36 936 502 HOH HOH . H 4 HOH B 37 937 699 HOH HOH . H 4 HOH B 38 938 286 HOH HOH . H 4 HOH B 39 939 625 HOH HOH . H 4 HOH B 40 940 20 HOH HOH . H 4 HOH B 41 941 261 HOH HOH . H 4 HOH B 42 942 148 HOH HOH . H 4 HOH B 43 943 41 HOH HOH . H 4 HOH B 44 944 134 HOH HOH . H 4 HOH B 45 945 212 HOH HOH . H 4 HOH B 46 946 163 HOH HOH . H 4 HOH B 47 947 357 HOH HOH . H 4 HOH B 48 948 90 HOH HOH . H 4 HOH B 49 949 284 HOH HOH . H 4 HOH B 50 950 293 HOH HOH . H 4 HOH B 51 951 303 HOH HOH . H 4 HOH B 52 952 69 HOH HOH . H 4 HOH B 53 953 40 HOH HOH . H 4 HOH B 54 954 686 HOH HOH . H 4 HOH B 55 955 111 HOH HOH . H 4 HOH B 56 956 39 HOH HOH . H 4 HOH B 57 957 42 HOH HOH . H 4 HOH B 58 958 294 HOH HOH . H 4 HOH B 59 959 443 HOH HOH . H 4 HOH B 60 960 642 HOH HOH . H 4 HOH B 61 961 189 HOH HOH . H 4 HOH B 62 962 383 HOH HOH . H 4 HOH B 63 963 569 HOH HOH . H 4 HOH B 64 964 50 HOH HOH . H 4 HOH B 65 965 139 HOH HOH . H 4 HOH B 66 966 3 HOH HOH . H 4 HOH B 67 967 319 HOH HOH . H 4 HOH B 68 968 4 HOH HOH . H 4 HOH B 69 969 259 HOH HOH . H 4 HOH B 70 970 289 HOH HOH . H 4 HOH B 71 971 671 HOH HOH . H 4 HOH B 72 972 288 HOH HOH . H 4 HOH B 73 973 460 HOH HOH . H 4 HOH B 74 974 73 HOH HOH . H 4 HOH B 75 975 177 HOH HOH . H 4 HOH B 76 976 249 HOH HOH . H 4 HOH B 77 977 62 HOH HOH . H 4 HOH B 78 978 125 HOH HOH . H 4 HOH B 79 979 60 HOH HOH . H 4 HOH B 80 980 203 HOH HOH . H 4 HOH B 81 981 373 HOH HOH . H 4 HOH B 82 982 304 HOH HOH . H 4 HOH B 83 983 96 HOH HOH . H 4 HOH B 84 984 476 HOH HOH . H 4 HOH B 85 985 505 HOH HOH . H 4 HOH B 86 986 102 HOH HOH . H 4 HOH B 87 987 566 HOH HOH . H 4 HOH B 88 988 433 HOH HOH . H 4 HOH B 89 989 18 HOH HOH . H 4 HOH B 90 990 372 HOH HOH . H 4 HOH B 91 991 36 HOH HOH . H 4 HOH B 92 992 408 HOH HOH . H 4 HOH B 93 993 26 HOH HOH . H 4 HOH B 94 994 584 HOH HOH . H 4 HOH B 95 995 307 HOH HOH . H 4 HOH B 96 996 273 HOH HOH . H 4 HOH B 97 997 216 HOH HOH . H 4 HOH B 98 998 147 HOH HOH . H 4 HOH B 99 999 233 HOH HOH . H 4 HOH B 100 1000 291 HOH HOH . H 4 HOH B 101 1001 311 HOH HOH . H 4 HOH B 102 1002 23 HOH HOH . H 4 HOH B 103 1003 657 HOH HOH . H 4 HOH B 104 1004 160 HOH HOH . H 4 HOH B 105 1005 54 HOH HOH . H 4 HOH B 106 1006 349 HOH HOH . H 4 HOH B 107 1007 501 HOH HOH . H 4 HOH B 108 1008 59 HOH HOH . H 4 HOH B 109 1009 327 HOH HOH . H 4 HOH B 110 1010 87 HOH HOH . H 4 HOH B 111 1011 61 HOH HOH . H 4 HOH B 112 1012 98 HOH HOH . H 4 HOH B 113 1013 628 HOH HOH . H 4 HOH B 114 1014 334 HOH HOH . H 4 HOH B 115 1015 101 HOH HOH . H 4 HOH B 116 1016 231 HOH HOH . H 4 HOH B 117 1017 429 HOH HOH . H 4 HOH B 118 1018 480 HOH HOH . H 4 HOH B 119 1019 363 HOH HOH . H 4 HOH B 120 1020 120 HOH HOH . H 4 HOH B 121 1021 705 HOH HOH . H 4 HOH B 122 1022 328 HOH HOH . H 4 HOH B 123 1023 7 HOH HOH . H 4 HOH B 124 1024 176 HOH HOH . H 4 HOH B 125 1025 617 HOH HOH . H 4 HOH B 126 1026 110 HOH HOH . H 4 HOH B 127 1027 585 HOH HOH . H 4 HOH B 128 1028 171 HOH HOH . H 4 HOH B 129 1029 513 HOH HOH . H 4 HOH B 130 1030 227 HOH HOH . H 4 HOH B 131 1031 398 HOH HOH . H 4 HOH B 132 1032 75 HOH HOH . H 4 HOH B 133 1033 13 HOH HOH . H 4 HOH B 134 1034 34 HOH HOH . H 4 HOH B 135 1035 654 HOH HOH . H 4 HOH B 136 1036 428 HOH HOH . H 4 HOH B 137 1037 263 HOH HOH . H 4 HOH B 138 1038 637 HOH HOH . H 4 HOH B 139 1039 296 HOH HOH . H 4 HOH B 140 1040 157 HOH HOH . H 4 HOH B 141 1041 424 HOH HOH . H 4 HOH B 142 1042 528 HOH HOH . H 4 HOH B 143 1043 660 HOH HOH . H 4 HOH B 144 1044 169 HOH HOH . H 4 HOH B 145 1045 16 HOH HOH . H 4 HOH B 146 1046 104 HOH HOH . H 4 HOH B 147 1047 255 HOH HOH . H 4 HOH B 148 1048 655 HOH HOH . H 4 HOH B 149 1049 407 HOH HOH . H 4 HOH B 150 1050 387 HOH HOH . H 4 HOH B 151 1051 17 HOH HOH . H 4 HOH B 152 1052 166 HOH HOH . H 4 HOH B 153 1053 221 HOH HOH . H 4 HOH B 154 1054 268 HOH HOH . H 4 HOH B 155 1055 9 HOH HOH . H 4 HOH B 156 1056 689 HOH HOH . H 4 HOH B 157 1057 290 HOH HOH . H 4 HOH B 158 1058 81 HOH HOH . H 4 HOH B 159 1059 400 HOH HOH . H 4 HOH B 160 1060 283 HOH HOH . H 4 HOH B 161 1061 258 HOH HOH . H 4 HOH B 162 1062 97 HOH HOH . H 4 HOH B 163 1063 185 HOH HOH . H 4 HOH B 164 1064 544 HOH HOH . H 4 HOH B 165 1065 121 HOH HOH . H 4 HOH B 166 1066 245 HOH HOH . H 4 HOH B 167 1067 253 HOH HOH . H 4 HOH B 168 1068 236 HOH HOH . H 4 HOH B 169 1069 712 HOH HOH . H 4 HOH B 170 1070 83 HOH HOH . H 4 HOH B 171 1071 30 HOH HOH . H 4 HOH B 172 1072 38 HOH HOH . H 4 HOH B 173 1073 386 HOH HOH . H 4 HOH B 174 1074 516 HOH HOH . H 4 HOH B 175 1075 135 HOH HOH . H 4 HOH B 176 1076 56 HOH HOH . H 4 HOH B 177 1077 114 HOH HOH . H 4 HOH B 178 1078 5 HOH HOH . H 4 HOH B 179 1079 564 HOH HOH . H 4 HOH B 180 1080 522 HOH HOH . H 4 HOH B 181 1081 145 HOH HOH . H 4 HOH B 182 1082 321 HOH HOH . H 4 HOH B 183 1083 95 HOH HOH . H 4 HOH B 184 1084 379 HOH HOH . H 4 HOH B 185 1085 52 HOH HOH . H 4 HOH B 186 1086 244 HOH HOH . H 4 HOH B 187 1087 332 HOH HOH . H 4 HOH B 188 1088 6 HOH HOH . H 4 HOH B 189 1089 264 HOH HOH . H 4 HOH B 190 1090 201 HOH HOH . H 4 HOH B 191 1091 452 HOH HOH . H 4 HOH B 192 1092 254 HOH HOH . H 4 HOH B 193 1093 560 HOH HOH . H 4 HOH B 194 1094 266 HOH HOH . H 4 HOH B 195 1095 25 HOH HOH . H 4 HOH B 196 1096 270 HOH HOH . H 4 HOH B 197 1097 277 HOH HOH . H 4 HOH B 198 1098 455 HOH HOH . H 4 HOH B 199 1099 124 HOH HOH . H 4 HOH B 200 1100 645 HOH HOH . H 4 HOH B 201 1101 330 HOH HOH . H 4 HOH B 202 1102 663 HOH HOH . H 4 HOH B 203 1103 316 HOH HOH . H 4 HOH B 204 1104 535 HOH HOH . H 4 HOH B 205 1105 493 HOH HOH . H 4 HOH B 206 1106 547 HOH HOH . H 4 HOH B 207 1107 518 HOH HOH . H 4 HOH B 208 1108 287 HOH HOH . H 4 HOH B 209 1109 402 HOH HOH . H 4 HOH B 210 1110 234 HOH HOH . H 4 HOH B 211 1111 404 HOH HOH . H 4 HOH B 212 1112 182 HOH HOH . H 4 HOH B 213 1113 180 HOH HOH . H 4 HOH B 214 1114 485 HOH HOH . H 4 HOH B 215 1115 715 HOH HOH . H 4 HOH B 216 1116 29 HOH HOH . H 4 HOH B 217 1117 397 HOH HOH . H 4 HOH B 218 1118 113 HOH HOH . H 4 HOH B 219 1119 468 HOH HOH . H 4 HOH B 220 1120 541 HOH HOH . H 4 HOH B 221 1121 632 HOH HOH . H 4 HOH B 222 1122 130 HOH HOH . H 4 HOH B 223 1123 442 HOH HOH . H 4 HOH B 224 1124 557 HOH HOH . H 4 HOH B 225 1125 470 HOH HOH . H 4 HOH B 226 1126 14 HOH HOH . H 4 HOH B 227 1127 693 HOH HOH . H 4 HOH B 228 1128 197 HOH HOH . H 4 HOH B 229 1129 353 HOH HOH . H 4 HOH B 230 1130 504 HOH HOH . H 4 HOH B 231 1131 116 HOH HOH . H 4 HOH B 232 1132 499 HOH HOH . H 4 HOH B 233 1133 685 HOH HOH . H 4 HOH B 234 1134 368 HOH HOH . H 4 HOH B 235 1135 574 HOH HOH . H 4 HOH B 236 1136 243 HOH HOH . H 4 HOH B 237 1137 609 HOH HOH . H 4 HOH B 238 1138 262 HOH HOH . H 4 HOH B 239 1139 550 HOH HOH . H 4 HOH B 240 1140 481 HOH HOH . H 4 HOH B 241 1141 53 HOH HOH . H 4 HOH B 242 1142 426 HOH HOH . H 4 HOH B 243 1143 688 HOH HOH . H 4 HOH B 244 1144 713 HOH HOH . H 4 HOH B 245 1145 338 HOH HOH . H 4 HOH B 246 1146 521 HOH HOH . H 4 HOH B 247 1147 704 HOH HOH . H 4 HOH B 248 1148 702 HOH HOH . H 4 HOH B 249 1149 536 HOH HOH . H 4 HOH B 250 1150 650 HOH HOH . H 4 HOH B 251 1151 520 HOH HOH . H 4 HOH B 252 1152 416 HOH HOH . H 4 HOH B 253 1153 427 HOH HOH . H 4 HOH B 254 1154 588 HOH HOH . H 4 HOH B 255 1155 473 HOH HOH . H 4 HOH B 256 1156 491 HOH HOH . H 4 HOH B 257 1157 292 HOH HOH . H 4 HOH B 258 1158 226 HOH HOH . H 4 HOH B 259 1159 556 HOH HOH . H 4 HOH B 260 1160 213 HOH HOH . H 4 HOH B 261 1161 222 HOH HOH . H 4 HOH B 262 1162 382 HOH HOH . H 4 HOH B 263 1163 240 HOH HOH . H 4 HOH B 264 1164 200 HOH HOH . H 4 HOH B 265 1165 555 HOH HOH . H 4 HOH B 266 1166 483 HOH HOH . H 4 HOH B 267 1167 302 HOH HOH . H 4 HOH B 268 1168 188 HOH HOH . H 4 HOH B 269 1169 204 HOH HOH . H 4 HOH B 270 1170 436 HOH HOH . H 4 HOH B 271 1171 251 HOH HOH . H 4 HOH B 272 1172 173 HOH HOH . H 4 HOH B 273 1173 653 HOH HOH . H 4 HOH B 274 1174 356 HOH HOH . H 4 HOH B 275 1175 413 HOH HOH . H 4 HOH B 276 1176 415 HOH HOH . H 4 HOH B 277 1177 205 HOH HOH . H 4 HOH B 278 1178 526 HOH HOH . H 4 HOH B 279 1179 694 HOH HOH . H 4 HOH B 280 1180 567 HOH HOH . H 4 HOH B 281 1181 318 HOH HOH . H 4 HOH B 282 1182 409 HOH HOH . H 4 HOH B 283 1183 333 HOH HOH . H 4 HOH B 284 1184 312 HOH HOH . H 4 HOH B 285 1185 553 HOH HOH . H 4 HOH B 286 1186 351 HOH HOH . H 4 HOH B 287 1187 313 HOH HOH . H 4 HOH B 288 1188 403 HOH HOH . H 4 HOH B 289 1189 431 HOH HOH . H 4 HOH B 290 1190 697 HOH HOH . H 4 HOH B 291 1191 552 HOH HOH . H 4 HOH B 292 1192 346 HOH HOH . H 4 HOH B 293 1193 714 HOH HOH . H 4 HOH B 294 1194 425 HOH HOH . H 4 HOH B 295 1195 112 HOH HOH . H 4 HOH B 296 1196 202 HOH HOH . H 4 HOH B 297 1197 194 HOH HOH . H 4 HOH B 298 1198 432 HOH HOH . H 4 HOH B 299 1199 229 HOH HOH . H 4 HOH B 300 1200 190 HOH HOH . H 4 HOH B 301 1201 580 HOH HOH . H 4 HOH B 302 1202 583 HOH HOH . H 4 HOH B 303 1203 595 HOH HOH . H 4 HOH B 304 1204 559 HOH HOH . H 4 HOH B 305 1205 456 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . E 2 5.129 18.901 36.104 1 17.07 ? PB GDP 801 B 1 HETATM 2 O O1B GDP . . . E 2 5.066 18.693 34.622 1 17.67 ? O1B GDP 801 B 1 HETATM 3 O O2B GDP . . . E 2 6.153 17.986 36.747 1 17.38 ? O2B GDP 801 B 1 HETATM 4 O O3B GDP . . . E 2 3.75 18.735 36.698 1 19.49 ? O3B GDP 801 B 1 HETATM 5 O O3A GDP . . . E 2 5.619 20.423 36.382 1 17.07 ? O3A GDP 801 B 1 HETATM 6 P PA GDP . . . E 2 5.776 21.669 35.365 1 18.57 ? PA GDP 801 B 1 HETATM 7 O O1A GDP . . . E 2 6.978 21.67 34.338 1 17.61 ? O1A GDP 801 B 1 HETATM 8 O O2A GDP . . . E 2 4.391 22.018 34.813 1 20.59 ? O2A GDP 801 B 1 HETATM 9 O O5' GDP . . . E 2 6.17 22.755 36.459 1 16.68 ? O5' GDP 801 B 1 HETATM 10 C C5' GDP . . . E 2 5.37 23.008 37.632 1 19.06 ? C5' GDP 801 B 1 HETATM 11 C C4' GDP . . . E 2 5.532 24.465 38.018 1 13.91 ? C4' GDP 801 B 1 HETATM 12 O O4' GDP . . . E 2 6.886 24.64 38.438 1 13.78 ? O4' GDP 801 B 1 HETATM 13 C C3' GDP . . . E 2 5.318 25.422 36.852 1 15.93 ? C3' GDP 801 B 1 HETATM 14 O O3' GDP . . . E 2 4.665 26.548 37.46 1 15.39 ? O3' GDP 801 B 1 HETATM 15 C C2' GDP . . . E 2 6.696 25.778 36.344 1 15.97 ? C2' GDP 801 B 1 HETATM 16 O O2' GDP . . . E 2 6.746 27.116 35.823 1 17.71 ? O2' GDP 801 B 1 HETATM 17 C C1' GDP . . . E 2 7.469 25.703 37.642 1 16.59 ? C1' GDP 801 B 1 HETATM 18 N N9 GDP . . . E 2 8.846 25.305 37.466 1 14.63 ? N9 GDP 801 B 1 HETATM 19 C C8 GDP . . . E 2 9.275 24.137 36.905 1 14.87 ? C8 GDP 801 B 1 HETATM 20 N N7 GDP . . . E 2 10.61 24.082 36.962 1 14.88 ? N7 GDP 801 B 1 HETATM 21 C C5 GDP . . . E 2 11.045 25.231 37.514 1 13.49 ? C5 GDP 801 B 1 HETATM 22 C C6 GDP . . . E 2 12.358 25.745 37.868 1 13.59 ? C6 GDP 801 B 1 HETATM 23 O O6 GDP . . . E 2 13.384 25.071 37.581 1 14.35 ? O6 GDP 801 B 1 HETATM 24 N N1 GDP . . . E 2 12.387 26.953 38.434 1 13.39 ? N1 GDP 801 B 1 HETATM 25 C C2 GDP . . . E 2 11.255 27.652 38.738 1 11.95 ? C2 GDP 801 B 1 HETATM 26 N N2 GDP . . . E 2 11.304 28.878 39.326 1 12.17 ? N2 GDP 801 B 1 HETATM 27 N N3 GDP . . . E 2 9.991 27.219 38.481 1 12.62 ? N3 GDP 801 B 1 HETATM 28 C C4 GDP . . . E 2 9.88 26.008 37.877 1 12.18 ? C4 GDP 801 B 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 902 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 28 #