data_5D45 # _model_server_result.job_id 1TGuEWbR9DTHUu9ABp-Htg _model_server_result.datetime_utc '2024-11-22 23:33:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5d45 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5D45 # _exptl.entry_id 5D45 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 381.466 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(5-cyclopropyl-2,3-diphenyl-1H-indol-1-yl)propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5D45 _cell.length_a 32.39 _cell.length_b 54.16 _cell.length_c 74.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5D45 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H23 N O2' _chem_comp.formula_weight 381.466 _chem_comp.id 57P _chem_comp.mon_nstd_flag . _chem_comp.name '3-(5-cyclopropyl-2,3-diphenyl-1H-indol-1-yl)propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C25 57P sing 1 n n C26 C24 57P sing 2 n n C25 C24 57P sing 3 n n C24 C10 57P sing 4 n n C10 C11 57P doub 5 n y C10 C9 57P sing 6 n y C11 C12 57P sing 7 n y C9 C8 57P doub 8 n y C12 C13 57P doub 9 n y C8 C13 57P sing 10 n y C8 C7 57P sing 11 n y C2 C3 57P doub 12 n y C2 C1 57P sing 13 n y C3 C4 57P sing 14 n y C13 N 57P sing 15 n y C1 C6 57P doub 16 n y C4 C7 57P sing 17 n n C4 C5 57P doub 18 n y C7 C14 57P doub 19 n y C6 C5 57P sing 20 n y N C14 57P sing 21 n y N C21 57P sing 22 n n C14 C15 57P sing 23 n n C21 C22 57P sing 24 n n C22 C23 57P sing 25 n n O1 C23 57P doub 26 n n C23 O2 57P sing 27 n n C15 C16 57P doub 28 n y C15 C20 57P sing 29 n y C16 C17 57P sing 30 n y C20 C19 57P doub 31 n y C17 C18 57P doub 32 n y C19 C18 57P sing 33 n y C2 H1 57P sing 34 n n C5 H2 57P sing 35 n n C6 H3 57P sing 36 n n C11 H4 57P sing 37 n n C1 H5 57P sing 38 n n C21 H6 57P sing 39 n n C21 H7 57P sing 40 n n C22 H8 57P sing 41 n n C22 H9 57P sing 42 n n C24 H10 57P sing 43 n n C25 H11 57P sing 44 n n C25 H12 57P sing 45 n n O2 H13 57P sing 46 n n C16 H14 57P sing 47 n n C17 H15 57P sing 48 n n C18 H16 57P sing 49 n n C19 H17 57P sing 50 n n C20 H18 57P sing 51 n n C3 H19 57P sing 52 n n C9 H20 57P sing 53 n n C12 H21 57P sing 54 n n C26 H22 57P sing 55 n n C26 H23 57P sing 56 n n # _atom_sites.entry_id 5D45 _atom_sites.fract_transf_matrix[1][1] 0.030874 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018464 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013405 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 57P A 1 201 1 57P 170 . C 3 HOH A 1 301 39 HOH HOH . C 3 HOH A 2 302 67 HOH HOH . C 3 HOH A 3 303 37 HOH HOH . C 3 HOH A 4 304 50 HOH HOH . C 3 HOH A 5 305 90 HOH HOH . C 3 HOH A 6 306 122 HOH HOH . C 3 HOH A 7 307 113 HOH HOH . C 3 HOH A 8 308 33 HOH HOH . C 3 HOH A 9 309 92 HOH HOH . C 3 HOH A 10 310 54 HOH HOH . C 3 HOH A 11 311 23 HOH HOH . C 3 HOH A 12 312 77 HOH HOH . C 3 HOH A 13 313 65 HOH HOH . C 3 HOH A 14 314 64 HOH HOH . C 3 HOH A 15 315 127 HOH HOH . C 3 HOH A 16 316 12 HOH HOH . C 3 HOH A 17 317 105 HOH HOH . C 3 HOH A 18 318 132 HOH HOH . C 3 HOH A 19 319 21 HOH HOH . C 3 HOH A 20 320 58 HOH HOH . C 3 HOH A 21 321 47 HOH HOH . C 3 HOH A 22 322 35 HOH HOH . C 3 HOH A 23 323 1 HOH HOH . C 3 HOH A 24 324 124 HOH HOH . C 3 HOH A 25 325 25 HOH HOH . C 3 HOH A 26 326 125 HOH HOH . C 3 HOH A 27 327 121 HOH HOH . C 3 HOH A 28 328 5 HOH HOH . C 3 HOH A 29 329 11 HOH HOH . C 3 HOH A 30 330 19 HOH HOH . C 3 HOH A 31 331 32 HOH HOH . C 3 HOH A 32 332 70 HOH HOH . C 3 HOH A 33 333 98 HOH HOH . C 3 HOH A 34 334 43 HOH HOH . C 3 HOH A 35 335 8 HOH HOH . C 3 HOH A 36 336 63 HOH HOH . C 3 HOH A 37 337 41 HOH HOH . C 3 HOH A 38 338 38 HOH HOH . C 3 HOH A 39 339 66 HOH HOH . C 3 HOH A 40 340 14 HOH HOH . C 3 HOH A 41 341 3 HOH HOH . C 3 HOH A 42 342 15 HOH HOH . C 3 HOH A 43 343 4 HOH HOH . C 3 HOH A 44 344 53 HOH HOH . C 3 HOH A 45 345 18 HOH HOH . C 3 HOH A 46 346 115 HOH HOH . C 3 HOH A 47 347 57 HOH HOH . C 3 HOH A 48 348 9 HOH HOH . C 3 HOH A 49 349 87 HOH HOH . C 3 HOH A 50 350 49 HOH HOH . C 3 HOH A 51 351 27 HOH HOH . C 3 HOH A 52 352 28 HOH HOH . C 3 HOH A 53 353 7 HOH HOH . C 3 HOH A 54 354 88 HOH HOH . C 3 HOH A 55 355 36 HOH HOH . C 3 HOH A 56 356 42 HOH HOH . C 3 HOH A 57 357 78 HOH HOH . C 3 HOH A 58 358 96 HOH HOH . C 3 HOH A 59 359 26 HOH HOH . C 3 HOH A 60 360 51 HOH HOH . C 3 HOH A 61 361 55 HOH HOH . C 3 HOH A 62 362 10 HOH HOH . C 3 HOH A 63 363 75 HOH HOH . C 3 HOH A 64 364 91 HOH HOH . C 3 HOH A 65 365 17 HOH HOH . C 3 HOH A 66 366 45 HOH HOH . C 3 HOH A 67 367 72 HOH HOH . C 3 HOH A 68 368 131 HOH HOH . C 3 HOH A 69 369 52 HOH HOH . C 3 HOH A 70 370 6 HOH HOH . C 3 HOH A 71 371 13 HOH HOH . C 3 HOH A 72 372 85 HOH HOH . C 3 HOH A 73 373 93 HOH HOH . C 3 HOH A 74 374 20 HOH HOH . C 3 HOH A 75 375 110 HOH HOH . C 3 HOH A 76 376 29 HOH HOH . C 3 HOH A 77 377 89 HOH HOH . C 3 HOH A 78 378 2 HOH HOH . C 3 HOH A 79 379 56 HOH HOH . C 3 HOH A 80 380 83 HOH HOH . C 3 HOH A 81 381 80 HOH HOH . C 3 HOH A 82 382 123 HOH HOH . C 3 HOH A 83 383 133 HOH HOH . C 3 HOH A 84 384 81 HOH HOH . C 3 HOH A 85 385 44 HOH HOH . C 3 HOH A 86 386 117 HOH HOH . C 3 HOH A 87 387 31 HOH HOH . C 3 HOH A 88 388 94 HOH HOH . C 3 HOH A 89 389 60 HOH HOH . C 3 HOH A 90 390 82 HOH HOH . C 3 HOH A 91 391 86 HOH HOH . C 3 HOH A 92 392 73 HOH HOH . C 3 HOH A 93 393 16 HOH HOH . C 3 HOH A 94 394 22 HOH HOH . C 3 HOH A 95 395 104 HOH HOH . C 3 HOH A 96 396 84 HOH HOH . C 3 HOH A 97 397 76 HOH HOH . C 3 HOH A 98 398 119 HOH HOH . C 3 HOH A 99 399 100 HOH HOH . C 3 HOH A 100 400 61 HOH HOH . C 3 HOH A 101 401 111 HOH HOH . C 3 HOH A 102 402 95 HOH HOH . C 3 HOH A 103 403 30 HOH HOH . C 3 HOH A 104 404 112 HOH HOH . C 3 HOH A 105 405 101 HOH HOH . C 3 HOH A 106 406 108 HOH HOH . C 3 HOH A 107 407 120 HOH HOH . C 3 HOH A 108 408 40 HOH HOH . C 3 HOH A 109 409 71 HOH HOH . C 3 HOH A 110 410 107 HOH HOH . C 3 HOH A 111 411 118 HOH HOH . C 3 HOH A 112 412 59 HOH HOH . C 3 HOH A 113 413 134 HOH HOH . C 3 HOH A 114 414 97 HOH HOH . C 3 HOH A 115 415 79 HOH HOH . C 3 HOH A 116 416 74 HOH HOH . C 3 HOH A 117 417 116 HOH HOH . C 3 HOH A 118 418 103 HOH HOH . C 3 HOH A 119 419 34 HOH HOH . C 3 HOH A 120 420 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 57P . . . B 2 -11.565 -7.422 -19.097 1 13.51 ? C8 57P 201 A 1 HETATM 2 C C2 57P . . . B 2 -15.326 -5.006 -18.805 1 14.64 ? C2 57P 201 A 1 HETATM 3 C C4 57P . . . B 2 -13.904 -6.828 -18.043 1 12.89 ? C4 57P 201 A 1 HETATM 4 C C5 57P . . . B 2 -14.985 -7.451 -17.402 1 14.06 ? C5 57P 201 A 1 HETATM 5 C C6 57P . . . B 2 -16.26 -6.897 -17.534 1 13.94 ? C6 57P 201 A 1 HETATM 6 C C11 57P . . . B 2 -9.396 -7.859 -20.731 1 14.72 ? C11 57P 201 A 1 HETATM 7 C C1 57P . . . B 2 -16.436 -5.655 -18.209 1 14.41 ? C1 57P 201 A 1 HETATM 8 C C21 57P . . . B 2 -9.359 -8.595 -16.332 1 13.67 ? C21 57P 201 A 1 HETATM 9 C C22 57P . . . B 2 -8.539 -7.287 -16.248 1 12.22 ? C22 57P 201 A 1 HETATM 10 C C24 57P . . . B 2 -10.872 -6.989 -22.728 1 18.43 ? C24 57P 201 A 1 HETATM 11 C C25 57P . . . B 2 -10.719 -8.391 -23.166 1 19.72 ? C25 57P 201 A 1 HETATM 12 O O1 57P . . . B 2 -9.894 -5.181 -16.214 1 15.06 ? O1 57P 201 A 1 HETATM 13 C C23 57P . . . B 2 -9.245 -6.085 -15.604 1 14.09 ? C23 57P 201 A 1 HETATM 14 O O2 57P . . . B 2 -9.378 -6.08 -14.32 1 14.02 ? O2 57P 201 A 1 HETATM 15 N N 57P . . . B 2 -10.491 -8.182 -17.212 1 11.78 ? N 57P 201 A 1 HETATM 16 C C14 57P . . . B 2 -11.751 -7.843 -16.845 1 12.46 ? C14 57P 201 A 1 HETATM 17 C C15 57P . . . B 2 -12.291 -7.98 -15.469 1 10.8 ? C15 57P 201 A 1 HETATM 18 C C16 57P . . . B 2 -12.306 -9.311 -15.029 1 11.78 ? C16 57P 201 A 1 HETATM 19 C C17 57P . . . B 2 -12.785 -9.622 -13.733 1 12.3 ? C17 57P 201 A 1 HETATM 20 C C18 57P . . . B 2 -13.19 -8.567 -12.892 1 11.58 ? C18 57P 201 A 1 HETATM 21 C C19 57P . . . B 2 -13.204 -7.223 -13.389 1 10.6 ? C19 57P 201 A 1 HETATM 22 C C20 57P . . . B 2 -12.716 -6.926 -14.684 1 10.6 ? C20 57P 201 A 1 HETATM 23 C C7 57P . . . B 2 -12.496 -7.339 -17.98 1 11.88 ? C7 57P 201 A 1 HETATM 24 C C3 57P . . . B 2 -14.028 -5.598 -18.715 1 12.84 ? C3 57P 201 A 1 HETATM 25 C C13 57P . . . B 2 -10.298 -7.991 -18.539 1 12.58 ? C13 57P 201 A 1 HETATM 26 C C9 57P . . . B 2 -11.707 -7.16 -20.435 1 14.47 ? C9 57P 201 A 1 HETATM 27 C C10 57P . . . B 2 -10.62 -7.355 -21.259 1 15.56 ? C10 57P 201 A 1 HETATM 28 C C12 57P . . . B 2 -9.203 -8.176 -19.382 1 13.77 ? C12 57P 201 A 1 HETATM 29 C C26 57P . . . B 2 -9.674 -7.378 -23.598 1 18.21 ? C26 57P 201 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #