data_5D5O # _model_server_result.job_id J9RS6HYnMhq3rrKUcW_lSA _model_server_result.datetime_utc '2024-12-01 11:00:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5d5o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 5D5O # _exptl.entry_id 5D5O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5D5O _cell.length_a 142.25 _cell.length_b 143.28 _cell.length_c 148.33 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5D5O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K 1 1 C,D,L,M 2 1 E,F,N,O 3 1 G,H,P,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5D5O _atom_sites.fract_transf_matrix[1][1] 0.00703 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006979 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 SO4 A 1 301 1 SO4 SO4 . J 3 HOH A 1 401 27 HOH HOH . J 3 HOH A 2 402 25 HOH HOH . J 3 HOH A 3 403 11 HOH HOH . J 3 HOH A 4 404 17 HOH HOH . J 3 HOH A 5 405 16 HOH HOH . J 3 HOH A 6 406 6 HOH HOH . J 3 HOH A 7 407 20 HOH HOH . J 3 HOH A 8 408 3 HOH HOH . K 3 HOH B 1 301 35 HOH HOH . K 3 HOH B 2 302 1 HOH HOH . L 3 HOH C 1 301 31 HOH HOH . L 3 HOH C 2 302 7 HOH HOH . L 3 HOH C 3 303 5 HOH HOH . M 3 HOH D 1 301 19 HOH HOH . M 3 HOH D 2 302 24 HOH HOH . M 3 HOH D 3 303 26 HOH HOH . N 3 HOH E 1 301 21 HOH HOH . N 3 HOH E 2 302 38 HOH HOH . N 3 HOH E 3 303 14 HOH HOH . N 3 HOH E 4 304 15 HOH HOH . N 3 HOH E 5 305 30 HOH HOH . N 3 HOH E 6 306 28 HOH HOH . N 3 HOH E 7 307 29 HOH HOH . N 3 HOH E 8 308 8 HOH HOH . N 3 HOH E 9 309 32 HOH HOH . N 3 HOH E 10 310 37 HOH HOH . O 3 HOH F 1 301 23 HOH HOH . O 3 HOH F 2 302 36 HOH HOH . O 3 HOH F 3 303 10 HOH HOH . P 3 HOH G 1 301 22 HOH HOH . P 3 HOH G 2 302 33 HOH HOH . P 3 HOH G 3 303 18 HOH HOH . P 3 HOH G 4 304 12 HOH HOH . P 3 HOH G 5 305 9 HOH HOH . Q 3 HOH H 1 301 34 HOH HOH . Q 3 HOH H 2 302 13 HOH HOH . Q 3 HOH H 3 303 2 HOH HOH . Q 3 HOH H 4 304 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . I 2 -30.24 33.03 -37.252 1 213.09 ? S SO4 301 A 1 HETATM 2 O O1 SO4 . . . I 2 -28.881 33.678 -37.366 1 144.57 ? O1 SO4 301 A 1 HETATM 3 O O2 SO4 . . . I 2 -30.803 32.723 -38.623 1 144.67 ? O2 SO4 301 A 1 HETATM 4 O O3 SO4 . . . I 2 -30.061 31.758 -36.485 1 169.62 ? O3 SO4 301 A 1 HETATM 5 O O4 SO4 . . . I 2 -31.196 33.925 -36.52 1 149.38 ? O4 SO4 301 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 406 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #