data_5D75
#
_model_server_result.job_id            XsfoHO4d6Uhmz2zFZ0q85Q 
_model_server_result.datetime_utc      '2024-12-03 22:12:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5d75 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    5D75 
#
_exptl.entry_id    5D75 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              597.822 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500)" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5D75 
_cell.length_a            74.784 
_cell.length_b            74.784 
_cell.length_c            44.618 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5D75 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C30 H63 N O10' 
_chem_comp.formula_weight    597.822 
_chem_comp.id                JEF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500)" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     JEFFAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C38 O12 JEF sing 302 n n 
C38 H381 JEF sing 303 n n 
C38 H382 JEF sing 304 n n 
C38 H383 JEF sing 305 n n 
O12 C37 JEF sing 306 n n 
C37 C36 JEF sing 307 n n 
C37 H371 JEF sing 308 n n 
C37 H372 JEF sing 309 n n 
C36 O11 JEF sing 310 n n 
C36 H361 JEF sing 311 n n 
C36 H362 JEF sing 312 n n 
C33 C34 JEF sing 313 n n 
C33 C32 JEF sing 314 n n 
C33 H33 JEF sing 315 n n 
C34 H341 JEF sing 316 n n 
C34 H342 JEF sing 317 n n 
C34 H343 JEF sing 318 n n 
C32 O10 JEF sing 319 n n 
C32 H321 JEF sing 320 n n 
C32 H322 JEF sing 321 n n 
O10 C19 JEF sing 322 n n 
C19 C40 JEF sing 323 n n 
C19 C20 JEF sing 324 n n 
C19 H19 JEF sing 325 n n 
C40 H401 JEF sing 326 n n 
C40 H402 JEF sing 327 n n 
C40 H403 JEF sing 328 n n 
C20 O JEF sing 329 n n 
C20 H201 JEF sing 330 n n 
C20 H202 JEF sing 331 n n 
O C JEF sing 332 n n 
C C18 JEF sing 333 n n 
C C17 JEF sing 334 n n 
C H JEF sing 335 n n 
C18 H181 JEF sing 336 n n 
C18 H182 JEF sing 337 n n 
C18 H183 JEF sing 338 n n 
C17 OH JEF sing 339 n n 
C17 H171 JEF sing 340 n n 
C17 H172 JEF sing 341 n n 
OH C2 JEF sing 342 n n 
C2 C1 JEF sing 343 n n 
C2 C3 JEF sing 344 n n 
C2 H2 JEF sing 345 n n 
C1 H11A JEF sing 346 n n 
C1 H12 JEF sing 347 n n 
C1 H13A JEF sing 348 n n 
C3 O2 JEF sing 349 n n 
C3 H31 JEF sing 350 n n 
C3 H32 JEF sing 351 n n 
O2 C5 JEF sing 352 n n 
C5 C6 JEF sing 353 n n 
C5 C4 JEF sing 354 n n 
C5 H5 JEF sing 355 n n 
C6 H61 JEF sing 356 n n 
C6 H62 JEF sing 357 n n 
C6 H63 JEF sing 358 n n 
C4 O3 JEF sing 359 n n 
C4 H41 JEF sing 360 n n 
C4 H42 JEF sing 361 n n 
O3 C7 JEF sing 362 n n 
C7 C9 JEF sing 363 n n 
C7 C8 JEF sing 364 n n 
C7 H7 JEF sing 365 n n 
C9 H91 JEF sing 366 n n 
C9 H92 JEF sing 367 n n 
C9 H93 JEF sing 368 n n 
C8 O4 JEF sing 369 n n 
C8 H81 JEF sing 370 n n 
C8 H82 JEF sing 371 n n 
O4 C11 JEF sing 372 n n 
C11 C12 JEF sing 373 n n 
C11 C10 JEF sing 374 n n 
C11 H11 JEF sing 375 n n 
C12 H121 JEF sing 376 n n 
C12 H122 JEF sing 377 n n 
C12 H123 JEF sing 378 n n 
C10 O5 JEF sing 379 n n 
C10 H101 JEF sing 380 n n 
C10 H102 JEF sing 381 n n 
O5 C13 JEF sing 382 n n 
C13 C15 JEF sing 383 n n 
C13 C14 JEF sing 384 n n 
C13 H13 JEF sing 385 n n 
C15 H151 JEF sing 386 n n 
C15 H152 JEF sing 387 n n 
C15 H153 JEF sing 388 n n 
C14 O6 JEF sing 389 n n 
C14 H141 JEF sing 390 n n 
C14 H142 JEF sing 391 n n 
O6 C16 JEF sing 392 n n 
C16 C30 JEF sing 393 n n 
C16 H161 JEF sing 394 n n 
C16 H162 JEF sing 395 n n 
C30 C31 JEF sing 396 n n 
C30 N1 JEF sing 397 n n 
C30 H30 JEF sing 398 n n 
C31 H311 JEF sing 399 n n 
C31 H312 JEF sing 400 n n 
C31 H313 JEF sing 401 n n 
N1 HN11 JEF sing 402 n n 
N1 HN12 JEF sing 403 n n 
C33 O11 JEF sing 404 n n 
#
_atom_sites.entry_id                     5D75 
_atom_sites.fract_transf_matrix[1][1]    0.013372 
_atom_sites.fract_transf_matrix[1][2]    0.00772 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01544 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022412 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FK5 A 1 301 108 FK5 FK5 . 
C 3 JEF A 1 302 1 JEF 6JZ . 
D 3 JEF A 1 303 2 JEF 6JZ . 
E 4 HOH A 1 401 125 HOH HOH . 
E 4 HOH A 2 402 164 HOH HOH . 
E 4 HOH A 3 403 33 HOH HOH . 
E 4 HOH A 4 404 128 HOH HOH . 
E 4 HOH A 5 405 47 HOH HOH . 
E 4 HOH A 6 406 13 HOH HOH . 
E 4 HOH A 7 407 144 HOH HOH . 
E 4 HOH A 8 408 46 HOH HOH . 
E 4 HOH A 9 409 89 HOH HOH . 
E 4 HOH A 10 410 16 HOH HOH . 
E 4 HOH A 11 411 138 HOH HOH . 
E 4 HOH A 12 412 28 HOH HOH . 
E 4 HOH A 13 413 34 HOH HOH . 
E 4 HOH A 14 414 31 HOH HOH . 
E 4 HOH A 15 415 30 HOH HOH . 
E 4 HOH A 16 416 1 HOH HOH . 
E 4 HOH A 17 417 141 HOH HOH . 
E 4 HOH A 18 418 21 HOH HOH . 
E 4 HOH A 19 419 67 HOH HOH . 
E 4 HOH A 20 420 129 HOH HOH . 
E 4 HOH A 21 421 118 HOH HOH . 
E 4 HOH A 22 422 29 HOH HOH . 
E 4 HOH A 23 423 76 HOH HOH . 
E 4 HOH A 24 424 153 HOH HOH . 
E 4 HOH A 25 425 90 HOH HOH . 
E 4 HOH A 26 426 63 HOH HOH . 
E 4 HOH A 27 427 2 HOH HOH . 
E 4 HOH A 28 428 6 HOH HOH . 
E 4 HOH A 29 429 81 HOH HOH . 
E 4 HOH A 30 430 50 HOH HOH . 
E 4 HOH A 31 431 57 HOH HOH . 
E 4 HOH A 32 432 109 HOH HOH . 
E 4 HOH A 33 433 145 HOH HOH . 
E 4 HOH A 34 434 78 HOH HOH . 
E 4 HOH A 35 435 14 HOH HOH . 
E 4 HOH A 36 436 4 HOH HOH . 
E 4 HOH A 37 437 11 HOH HOH . 
E 4 HOH A 38 438 64 HOH HOH . 
E 4 HOH A 39 439 95 HOH HOH . 
E 4 HOH A 40 440 32 HOH HOH . 
E 4 HOH A 41 441 156 HOH HOH . 
E 4 HOH A 42 442 73 HOH HOH . 
E 4 HOH A 43 443 3 HOH HOH . 
E 4 HOH A 44 444 62 HOH HOH . 
E 4 HOH A 45 445 8 HOH HOH . 
E 4 HOH A 46 446 51 HOH HOH . 
E 4 HOH A 47 447 119 HOH HOH . 
E 4 HOH A 48 448 12 HOH HOH . 
E 4 HOH A 49 449 24 HOH HOH . 
E 4 HOH A 50 450 52 HOH HOH . 
E 4 HOH A 51 451 5 HOH HOH . 
E 4 HOH A 52 452 66 HOH HOH . 
E 4 HOH A 53 453 49 HOH HOH . 
E 4 HOH A 54 454 106 HOH HOH . 
E 4 HOH A 55 455 123 HOH HOH . 
E 4 HOH A 56 456 61 HOH HOH . 
E 4 HOH A 57 457 121 HOH HOH . 
E 4 HOH A 58 458 37 HOH HOH . 
E 4 HOH A 59 459 94 HOH HOH . 
E 4 HOH A 60 460 48 HOH HOH . 
E 4 HOH A 61 461 140 HOH HOH . 
E 4 HOH A 62 462 133 HOH HOH . 
E 4 HOH A 63 463 82 HOH HOH . 
E 4 HOH A 64 464 17 HOH HOH . 
E 4 HOH A 65 465 10 HOH HOH . 
E 4 HOH A 66 466 101 HOH HOH . 
E 4 HOH A 67 467 15 HOH HOH . 
E 4 HOH A 68 468 165 HOH HOH . 
E 4 HOH A 69 469 26 HOH HOH . 
E 4 HOH A 70 470 160 HOH HOH . 
E 4 HOH A 71 471 53 HOH HOH . 
E 4 HOH A 72 472 91 HOH HOH . 
E 4 HOH A 73 473 115 HOH HOH . 
E 4 HOH A 74 474 107 HOH HOH . 
E 4 HOH A 75 475 162 HOH HOH . 
E 4 HOH A 76 476 27 HOH HOH . 
E 4 HOH A 77 477 38 HOH HOH . 
E 4 HOH A 78 478 110 HOH HOH . 
E 4 HOH A 79 479 60 HOH HOH . 
E 4 HOH A 80 480 158 HOH HOH . 
E 4 HOH A 81 481 139 HOH HOH . 
E 4 HOH A 82 482 35 HOH HOH . 
E 4 HOH A 83 483 130 HOH HOH . 
E 4 HOH A 84 484 112 HOH HOH . 
E 4 HOH A 85 485 58 HOH HOH . 
E 4 HOH A 86 486 126 HOH HOH . 
E 4 HOH A 87 487 143 HOH HOH . 
E 4 HOH A 88 488 163 HOH HOH . 
E 4 HOH A 89 489 116 HOH HOH . 
E 4 HOH A 90 490 159 HOH HOH . 
E 4 HOH A 91 491 136 HOH HOH . 
E 4 HOH A 92 492 87 HOH HOH . 
E 4 HOH A 93 493 135 HOH HOH . 
E 4 HOH A 94 494 148 HOH HOH . 
E 4 HOH A 95 495 142 HOH HOH . 
E 4 HOH A 96 496 166 HOH HOH . 
E 4 HOH A 97 497 146 HOH HOH . 
E 4 HOH A 98 498 120 HOH HOH . 
E 4 HOH A 99 499 105 HOH HOH . 
E 4 HOH A 100 500 42 HOH HOH . 
E 4 HOH A 101 501 114 HOH HOH . 
E 4 HOH A 102 502 157 HOH HOH . 
E 4 HOH A 103 503 124 HOH HOH . 
E 4 HOH A 104 504 98 HOH HOH . 
E 4 HOH A 105 505 152 HOH HOH . 
E 4 HOH A 106 506 147 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C37 JEF . . . D 3 13.022 -20.829 13.968 1 29.18 ? C37 JEF 303 A 1 
HETATM 2 C C36 JEF . . . D 3 13.562 -20.873 12.547 1 33.45 ? C36 JEF 303 A 1 
HETATM 3 O O11 JEF . . . D 3 13.796 -22.217 12.123 1 37.24 ? O11 JEF 303 A 1 
HETATM 4 C C33 JEF . . . D 3 15.15 -22.41 11.738 1 40.71 ? C33 JEF 303 A 1 
HETATM 5 C C32 JEF . . . D 3 15.47 -23.89 11.563 1 47.08 ? C32 JEF 303 A 1 
HETATM 6 O O10 JEF . . . D 3 16.737 -24.109 10.929 1 55.35 ? O10 JEF 303 A 1 
HETATM 7 C C19 JEF . . . D 3 16.787 -23.759 9.542 1 55.64 ? C19 JEF 303 A 1 
HETATM 8 C C20 JEF . . . D 3 17.952 -22.8 9.303 1 55.53 ? C20 JEF 303 A 1 
HETATM 9 O O JEF . . . D 3 17.455 -21.68 8.575 1 54.08 ? O JEF 303 A 1 
HETATM 10 C C JEF . . . D 3 18.262 -21.346 7.449 1 60.58 ? C JEF 303 A 1 
HETATM 11 C C17 JEF . . . D 3 17.425 -21.485 6.183 1 67.54 ? C17 JEF 303 A 1 
HETATM 12 O OH JEF . . . D 3 18.194 -22.097 5.135 1 78.25 ? OH JEF 303 A 1 
HETATM 13 C C2 JEF . . . D 3 17.685 -23.372 4.711 1 78.83 ? C2 JEF 303 A 1 
HETATM 14 C C3 JEF . . . D 3 17.165 -23.328 3.269 1 78.02 ? C3 JEF 303 A 1 
HETATM 15 O O2 JEF . . . D 3 17.512 -24.524 2.564 1 80.17 ? O2 JEF 303 A 1 
HETATM 16 C C5 JEF . . . D 3 16.38 -25.311 2.18 1 75.38 ? C5 JEF 303 A 1 
HETATM 17 C C4 JEF . . . D 3 16.841 -26.538 1.419 1 73.17 ? C4 JEF 303 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           17 
#