data_5D7P # _model_server_result.job_id Sb2StKpDyD9_jul6DK219w _model_server_result.datetime_utc '2024-10-18 10:19:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5d7p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 5D7P # _exptl.entry_id 5D7P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5D7P _cell.length_a 76.496 _cell.length_b 77.578 _cell.length_c 114.206 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5D7P _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 143 A CYS 195 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc2 A SG CYS 148 A CYS 200 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc3 A SG CYS 169 A CYS 221 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc4 A SG CYS 172 A CYS 224 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc5 B SG CYS 143 B CYS 195 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc6 B SG CYS 148 B CYS 200 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc7 B SG CYS 169 B CYS 221 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc8 B SG CYS 172 B CYS 224 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5D7P _atom_sites.fract_transf_matrix[1][1] 0.013073 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01289 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008756 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 400 ZN ZN . D 3 AR6 A 1 402 2 AR6 AR6 . E 4 OCZ A 1 403 3 OCZ OCZ . F 4 OCZ A 1 404 4 OCZ OCZ . G 2 ZN B 1 401 400 ZN ZN . H 3 AR6 B 1 402 1 AR6 AR6 . I 4 OCZ B 1 403 5 OCZ OCZ . J 4 OCZ B 1 404 6 OCZ OCZ . K 5 PEG B 1 405 7 PEG PEG . L 6 HOH A 1 501 98 HOH HOH . L 6 HOH A 2 502 266 HOH HOH . L 6 HOH A 3 503 180 HOH HOH . L 6 HOH A 4 504 43 HOH HOH . L 6 HOH A 5 505 1 HOH HOH . L 6 HOH A 6 506 66 HOH HOH . L 6 HOH A 7 507 169 HOH HOH . L 6 HOH A 8 508 71 HOH HOH . L 6 HOH A 9 509 47 HOH HOH . L 6 HOH A 10 510 145 HOH HOH . L 6 HOH A 11 511 75 HOH HOH . L 6 HOH A 12 512 231 HOH HOH . L 6 HOH A 13 513 59 HOH HOH . L 6 HOH A 14 514 140 HOH HOH . L 6 HOH A 15 515 56 HOH HOH . L 6 HOH A 16 516 119 HOH HOH . L 6 HOH A 17 517 87 HOH HOH . L 6 HOH A 18 518 196 HOH HOH . L 6 HOH A 19 519 198 HOH HOH . L 6 HOH A 20 520 79 HOH HOH . L 6 HOH A 21 521 109 HOH HOH . L 6 HOH A 22 522 76 HOH HOH . L 6 HOH A 23 523 230 HOH HOH . L 6 HOH A 24 524 245 HOH HOH . L 6 HOH A 25 525 278 HOH HOH . L 6 HOH A 26 526 272 HOH HOH . L 6 HOH A 27 527 215 HOH HOH . L 6 HOH A 28 528 183 HOH HOH . L 6 HOH A 29 529 15 HOH HOH . L 6 HOH A 30 530 220 HOH HOH . L 6 HOH A 31 531 133 HOH HOH . L 6 HOH A 32 532 60 HOH HOH . L 6 HOH A 33 533 61 HOH HOH . L 6 HOH A 34 534 224 HOH HOH . L 6 HOH A 35 535 229 HOH HOH . L 6 HOH A 36 536 237 HOH HOH . L 6 HOH A 37 537 241 HOH HOH . L 6 HOH A 38 538 17 HOH HOH . L 6 HOH A 39 539 8 HOH HOH . L 6 HOH A 40 540 74 HOH HOH . L 6 HOH A 41 541 195 HOH HOH . L 6 HOH A 42 542 223 HOH HOH . L 6 HOH A 43 543 101 HOH HOH . L 6 HOH A 44 544 89 HOH HOH . L 6 HOH A 45 545 203 HOH HOH . L 6 HOH A 46 546 216 HOH HOH . L 6 HOH A 47 547 274 HOH HOH . L 6 HOH A 48 548 160 HOH HOH . L 6 HOH A 49 549 217 HOH HOH . L 6 HOH A 50 550 151 HOH HOH . L 6 HOH A 51 551 181 HOH HOH . L 6 HOH A 52 552 174 HOH HOH . L 6 HOH A 53 553 205 HOH HOH . L 6 HOH A 54 554 238 HOH HOH . L 6 HOH A 55 555 252 HOH HOH . L 6 HOH A 56 556 280 HOH HOH . L 6 HOH A 57 557 244 HOH HOH . L 6 HOH A 58 558 206 HOH HOH . L 6 HOH A 59 559 136 HOH HOH . L 6 HOH A 60 560 257 HOH HOH . L 6 HOH A 61 561 260 HOH HOH . L 6 HOH A 62 562 233 HOH HOH . L 6 HOH A 63 563 235 HOH HOH . L 6 HOH A 64 564 228 HOH HOH . L 6 HOH A 65 565 209 HOH HOH . L 6 HOH A 66 566 243 HOH HOH . L 6 HOH A 67 567 103 HOH HOH . L 6 HOH A 68 568 69 HOH HOH . L 6 HOH A 69 569 107 HOH HOH . L 6 HOH A 70 570 199 HOH HOH . L 6 HOH A 71 571 212 HOH HOH . L 6 HOH A 72 572 255 HOH HOH . L 6 HOH A 73 573 2 HOH HOH . L 6 HOH A 74 574 81 HOH HOH . L 6 HOH A 75 575 117 HOH HOH . L 6 HOH A 76 576 52 HOH HOH . L 6 HOH A 77 577 5 HOH HOH . L 6 HOH A 78 578 40 HOH HOH . L 6 HOH A 79 579 127 HOH HOH . L 6 HOH A 80 580 122 HOH HOH . L 6 HOH A 81 581 116 HOH HOH . L 6 HOH A 82 582 289 HOH HOH . L 6 HOH A 83 583 249 HOH HOH . L 6 HOH A 84 584 14 HOH HOH . L 6 HOH A 85 585 54 HOH HOH . L 6 HOH A 86 586 163 HOH HOH . L 6 HOH A 87 587 213 HOH HOH . L 6 HOH A 88 588 194 HOH HOH . L 6 HOH A 89 589 102 HOH HOH . L 6 HOH A 90 590 267 HOH HOH . L 6 HOH A 91 591 124 HOH HOH . L 6 HOH A 92 592 225 HOH HOH . L 6 HOH A 93 593 276 HOH HOH . L 6 HOH A 94 594 218 HOH HOH . L 6 HOH A 95 595 46 HOH HOH . L 6 HOH A 96 596 258 HOH HOH . L 6 HOH A 97 597 94 HOH HOH . L 6 HOH A 98 598 268 HOH HOH . L 6 HOH A 99 599 35 HOH HOH . L 6 HOH A 100 600 210 HOH HOH . L 6 HOH A 101 601 207 HOH HOH . L 6 HOH A 102 602 100 HOH HOH . L 6 HOH A 103 603 197 HOH HOH . L 6 HOH A 104 604 128 HOH HOH . L 6 HOH A 105 605 283 HOH HOH . L 6 HOH A 106 606 150 HOH HOH . L 6 HOH A 107 607 211 HOH HOH . L 6 HOH A 108 608 277 HOH HOH . L 6 HOH A 109 609 261 HOH HOH . L 6 HOH A 110 610 271 HOH HOH . L 6 HOH A 111 611 63 HOH HOH . L 6 HOH A 112 612 73 HOH HOH . L 6 HOH A 113 613 97 HOH HOH . L 6 HOH A 114 614 167 HOH HOH . L 6 HOH A 115 615 55 HOH HOH . L 6 HOH A 116 616 185 HOH HOH . L 6 HOH A 117 617 234 HOH HOH . L 6 HOH A 118 618 3 HOH HOH . L 6 HOH A 119 619 70 HOH HOH . L 6 HOH A 120 620 200 HOH HOH . L 6 HOH A 121 621 131 HOH HOH . L 6 HOH A 122 622 285 HOH HOH . L 6 HOH A 123 623 239 HOH HOH . L 6 HOH A 124 624 287 HOH HOH . L 6 HOH A 125 625 148 HOH HOH . L 6 HOH A 126 626 221 HOH HOH . L 6 HOH A 127 627 227 HOH HOH . L 6 HOH A 128 628 110 HOH HOH . L 6 HOH A 129 629 204 HOH HOH . L 6 HOH A 130 630 34 HOH HOH . L 6 HOH A 131 631 240 HOH HOH . L 6 HOH A 132 632 28 HOH HOH . L 6 HOH A 133 633 88 HOH HOH . L 6 HOH A 134 634 104 HOH HOH . L 6 HOH A 135 635 95 HOH HOH . L 6 HOH A 136 636 108 HOH HOH . L 6 HOH A 137 637 186 HOH HOH . L 6 HOH A 138 638 248 HOH HOH . L 6 HOH A 139 639 44 HOH HOH . L 6 HOH A 140 640 281 HOH HOH . L 6 HOH A 141 641 80 HOH HOH . L 6 HOH A 142 642 83 HOH HOH . L 6 HOH A 143 643 58 HOH HOH . L 6 HOH A 144 644 146 HOH HOH . L 6 HOH A 145 645 226 HOH HOH . L 6 HOH A 146 646 191 HOH HOH . L 6 HOH A 147 647 113 HOH HOH . L 6 HOH A 148 648 286 HOH HOH . L 6 HOH A 149 649 153 HOH HOH . L 6 HOH A 150 650 175 HOH HOH . L 6 HOH A 151 651 188 HOH HOH . L 6 HOH A 152 652 4 HOH HOH . L 6 HOH A 153 653 123 HOH HOH . L 6 HOH A 154 654 77 HOH HOH . L 6 HOH A 155 655 284 HOH HOH . L 6 HOH A 156 656 120 HOH HOH . L 6 HOH A 157 657 7 HOH HOH . L 6 HOH A 158 658 51 HOH HOH . L 6 HOH A 159 659 155 HOH HOH . L 6 HOH A 160 660 112 HOH HOH . L 6 HOH A 161 661 29 HOH HOH . L 6 HOH A 162 662 182 HOH HOH . L 6 HOH A 163 663 138 HOH HOH . L 6 HOH A 164 664 262 HOH HOH . L 6 HOH A 165 665 290 HOH HOH . L 6 HOH A 166 666 282 HOH HOH . L 6 HOH A 167 667 26 HOH HOH . L 6 HOH A 168 668 64 HOH HOH . L 6 HOH A 169 669 72 HOH HOH . L 6 HOH A 170 670 288 HOH HOH . L 6 HOH A 171 671 179 HOH HOH . L 6 HOH A 172 672 90 HOH HOH . M 6 HOH B 1 501 121 HOH HOH . M 6 HOH B 2 502 32 HOH HOH . M 6 HOH B 3 503 25 HOH HOH . M 6 HOH B 4 504 9 HOH HOH . M 6 HOH B 5 505 161 HOH HOH . M 6 HOH B 6 506 132 HOH HOH . M 6 HOH B 7 507 214 HOH HOH . M 6 HOH B 8 508 38 HOH HOH . M 6 HOH B 9 509 21 HOH HOH . M 6 HOH B 10 510 273 HOH HOH . M 6 HOH B 11 511 36 HOH HOH . M 6 HOH B 12 512 152 HOH HOH . M 6 HOH B 13 513 96 HOH HOH . M 6 HOH B 14 514 31 HOH HOH . M 6 HOH B 15 515 10 HOH HOH . M 6 HOH B 16 516 265 HOH HOH . M 6 HOH B 17 517 130 HOH HOH . M 6 HOH B 18 518 157 HOH HOH . M 6 HOH B 19 519 86 HOH HOH . M 6 HOH B 20 520 159 HOH HOH . M 6 HOH B 21 521 18 HOH HOH . M 6 HOH B 22 522 125 HOH HOH . M 6 HOH B 23 523 208 HOH HOH . M 6 HOH B 24 524 115 HOH HOH . M 6 HOH B 25 525 236 HOH HOH . M 6 HOH B 26 526 270 HOH HOH . M 6 HOH B 27 527 62 HOH HOH . M 6 HOH B 28 528 247 HOH HOH . M 6 HOH B 29 529 177 HOH HOH . M 6 HOH B 30 530 269 HOH HOH . M 6 HOH B 31 531 135 HOH HOH . M 6 HOH B 32 532 264 HOH HOH . M 6 HOH B 33 533 6 HOH HOH . M 6 HOH B 34 534 53 HOH HOH . M 6 HOH B 35 535 22 HOH HOH . M 6 HOH B 36 536 251 HOH HOH . M 6 HOH B 37 537 158 HOH HOH . M 6 HOH B 38 538 41 HOH HOH . M 6 HOH B 39 539 48 HOH HOH . M 6 HOH B 40 540 193 HOH HOH . M 6 HOH B 41 541 275 HOH HOH . M 6 HOH B 42 542 137 HOH HOH . M 6 HOH B 43 543 105 HOH HOH . M 6 HOH B 44 544 49 HOH HOH . M 6 HOH B 45 545 39 HOH HOH . M 6 HOH B 46 546 259 HOH HOH . M 6 HOH B 47 547 37 HOH HOH . M 6 HOH B 48 548 141 HOH HOH . M 6 HOH B 49 549 246 HOH HOH . M 6 HOH B 50 550 20 HOH HOH . M 6 HOH B 51 551 173 HOH HOH . M 6 HOH B 52 552 242 HOH HOH . M 6 HOH B 53 553 190 HOH HOH . M 6 HOH B 54 554 165 HOH HOH . M 6 HOH B 55 555 16 HOH HOH . M 6 HOH B 56 556 114 HOH HOH . M 6 HOH B 57 557 139 HOH HOH . M 6 HOH B 58 558 24 HOH HOH . M 6 HOH B 59 559 67 HOH HOH . M 6 HOH B 60 560 78 HOH HOH . M 6 HOH B 61 561 254 HOH HOH . M 6 HOH B 62 562 12 HOH HOH . M 6 HOH B 63 563 202 HOH HOH . M 6 HOH B 64 564 33 HOH HOH . M 6 HOH B 65 565 85 HOH HOH . M 6 HOH B 66 566 42 HOH HOH . M 6 HOH B 67 567 178 HOH HOH . M 6 HOH B 68 568 65 HOH HOH . M 6 HOH B 69 569 11 HOH HOH . M 6 HOH B 70 570 45 HOH HOH . M 6 HOH B 71 571 176 HOH HOH . M 6 HOH B 72 572 166 HOH HOH . M 6 HOH B 73 573 13 HOH HOH . M 6 HOH B 74 574 201 HOH HOH . M 6 HOH B 75 575 222 HOH HOH . M 6 HOH B 76 576 30 HOH HOH . M 6 HOH B 77 577 99 HOH HOH . M 6 HOH B 78 578 279 HOH HOH . M 6 HOH B 79 579 232 HOH HOH . M 6 HOH B 80 580 171 HOH HOH . M 6 HOH B 81 581 57 HOH HOH . M 6 HOH B 82 582 23 HOH HOH . M 6 HOH B 83 583 172 HOH HOH . M 6 HOH B 84 584 50 HOH HOH . M 6 HOH B 85 585 27 HOH HOH . M 6 HOH B 86 586 219 HOH HOH . M 6 HOH B 87 587 91 HOH HOH . M 6 HOH B 88 588 93 HOH HOH . M 6 HOH B 89 589 250 HOH HOH . M 6 HOH B 90 590 142 HOH HOH . M 6 HOH B 91 591 192 HOH HOH . M 6 HOH B 92 592 149 HOH HOH . M 6 HOH B 93 593 19 HOH HOH . M 6 HOH B 94 594 111 HOH HOH . M 6 HOH B 95 595 189 HOH HOH . M 6 HOH B 96 596 253 HOH HOH . M 6 HOH B 97 597 256 HOH HOH . M 6 HOH B 98 598 162 HOH HOH . M 6 HOH B 99 599 106 HOH HOH . M 6 HOH B 100 600 168 HOH HOH . M 6 HOH B 101 601 187 HOH HOH . M 6 HOH B 102 602 147 HOH HOH . M 6 HOH B 103 603 82 HOH HOH . M 6 HOH B 104 604 118 HOH HOH . M 6 HOH B 105 605 164 HOH HOH . M 6 HOH B 106 606 170 HOH HOH . M 6 HOH B 107 607 84 HOH HOH . M 6 HOH B 108 608 263 HOH HOH . M 6 HOH B 109 609 154 HOH HOH . M 6 HOH B 110 610 68 HOH HOH . M 6 HOH B 111 611 144 HOH HOH . M 6 HOH B 112 612 134 HOH HOH . M 6 HOH B 113 613 156 HOH HOH . M 6 HOH B 114 614 92 HOH HOH . M 6 HOH B 115 615 126 HOH HOH . M 6 HOH B 116 616 129 HOH HOH . M 6 HOH B 117 617 143 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -8.441 _atom_site.Cartn_y 8.059 _atom_site.Cartn_z -55.276 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #