data_5D81 # _model_server_result.job_id luRyVNmxwBGcd3UbzU3w3Q _model_server_result.datetime_utc '2025-01-10 17:30:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5d81 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 5D81 # _exptl.entry_id 5D81 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5D81 _cell.length_a 35.65 _cell.length_b 94.831 _cell.length_c 72.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5D81 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 56 A PHE 56 1_555 A N 3CT 57 A 3CT 57 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C PHE 56 A PHE 56 1_555 A N 3CT 57 A 3CT 57 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C 3CT 57 A 3CT 57 1_555 A N ARG 58 A ARG 58 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C 3CT 57 A 3CT 57 1_555 A N ARG 58 A ARG 58 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5D81 _atom_sites.fract_transf_matrix[1][1] 0.02805 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010545 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013708 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 1 SO4 SO4 . C 2 SO4 A 1 202 2 SO4 SO4 . D 3 HOH A 1 301 51 HOH HOH . D 3 HOH A 2 302 100 HOH HOH . D 3 HOH A 3 303 86 HOH HOH . D 3 HOH A 4 304 92 HOH HOH . D 3 HOH A 5 305 108 HOH HOH . D 3 HOH A 6 306 49 HOH HOH . D 3 HOH A 7 307 46 HOH HOH . D 3 HOH A 8 308 39 HOH HOH . D 3 HOH A 9 309 83 HOH HOH . D 3 HOH A 10 310 8 HOH HOH . D 3 HOH A 11 311 96 HOH HOH . D 3 HOH A 12 312 1 HOH HOH . D 3 HOH A 13 313 41 HOH HOH . D 3 HOH A 14 314 29 HOH HOH . D 3 HOH A 15 315 1 HOH HOH . D 3 HOH A 16 316 65 HOH HOH . D 3 HOH A 17 317 79 HOH HOH . D 3 HOH A 18 318 93 HOH HOH . D 3 HOH A 19 319 66 HOH HOH . D 3 HOH A 20 320 24 HOH HOH . D 3 HOH A 21 321 107 HOH HOH . D 3 HOH A 22 322 11 HOH HOH . D 3 HOH A 23 323 10 HOH HOH . D 3 HOH A 24 324 27 HOH HOH . D 3 HOH A 25 325 22 HOH HOH . D 3 HOH A 26 326 7 HOH HOH . D 3 HOH A 27 327 32 HOH HOH . D 3 HOH A 28 328 94 HOH HOH . D 3 HOH A 29 329 45 HOH HOH . D 3 HOH A 30 330 61 HOH HOH . D 3 HOH A 31 331 73 HOH HOH . D 3 HOH A 32 332 15 HOH HOH . D 3 HOH A 33 333 69 HOH HOH . D 3 HOH A 34 334 17 HOH HOH . D 3 HOH A 35 335 5 HOH HOH . D 3 HOH A 36 336 35 HOH HOH . D 3 HOH A 37 337 19 HOH HOH . D 3 HOH A 38 338 20 HOH HOH . D 3 HOH A 39 339 38 HOH HOH . D 3 HOH A 40 340 9 HOH HOH . D 3 HOH A 41 341 40 HOH HOH . D 3 HOH A 42 342 60 HOH HOH . D 3 HOH A 43 343 25 HOH HOH . D 3 HOH A 44 344 102 HOH HOH . D 3 HOH A 45 345 13 HOH HOH . D 3 HOH A 46 346 77 HOH HOH . D 3 HOH A 47 347 33 HOH HOH . D 3 HOH A 48 348 14 HOH HOH . D 3 HOH A 49 349 85 HOH HOH . D 3 HOH A 50 350 18 HOH HOH . D 3 HOH A 51 351 3 HOH HOH . D 3 HOH A 52 352 34 HOH HOH . D 3 HOH A 53 353 56 HOH HOH . D 3 HOH A 54 354 70 HOH HOH . D 3 HOH A 55 355 12 HOH HOH . D 3 HOH A 56 356 28 HOH HOH . D 3 HOH A 57 357 2 HOH HOH . D 3 HOH A 58 358 30 HOH HOH . D 3 HOH A 59 359 42 HOH HOH . D 3 HOH A 60 360 91 HOH HOH . D 3 HOH A 61 361 4 HOH HOH . D 3 HOH A 62 362 76 HOH HOH . D 3 HOH A 63 363 16 HOH HOH . D 3 HOH A 64 364 99 HOH HOH . D 3 HOH A 65 365 21 HOH HOH . D 3 HOH A 66 366 95 HOH HOH . D 3 HOH A 67 367 54 HOH HOH . D 3 HOH A 68 368 53 HOH HOH . D 3 HOH A 69 369 72 HOH HOH . D 3 HOH A 70 370 23 HOH HOH . D 3 HOH A 71 371 63 HOH HOH . D 3 HOH A 72 372 6 HOH HOH . D 3 HOH A 73 373 31 HOH HOH . D 3 HOH A 74 374 57 HOH HOH . D 3 HOH A 75 375 47 HOH HOH . D 3 HOH A 76 376 75 HOH HOH . D 3 HOH A 77 377 90 HOH HOH . D 3 HOH A 78 378 67 HOH HOH . D 3 HOH A 79 379 52 HOH HOH . D 3 HOH A 80 380 106 HOH HOH . D 3 HOH A 81 381 68 HOH HOH . D 3 HOH A 82 382 101 HOH HOH . D 3 HOH A 83 383 43 HOH HOH . D 3 HOH A 84 384 87 HOH HOH . D 3 HOH A 85 385 74 HOH HOH . D 3 HOH A 86 386 58 HOH HOH . D 3 HOH A 87 387 78 HOH HOH . D 3 HOH A 88 388 84 HOH HOH . D 3 HOH A 89 389 103 HOH HOH . D 3 HOH A 90 390 48 HOH HOH . D 3 HOH A 91 391 81 HOH HOH . D 3 HOH A 92 392 88 HOH HOH . D 3 HOH A 93 393 26 HOH HOH . D 3 HOH A 94 394 97 HOH HOH . D 3 HOH A 95 395 36 HOH HOH . D 3 HOH A 96 396 82 HOH HOH . D 3 HOH A 97 397 105 HOH HOH . D 3 HOH A 98 398 64 HOH HOH . D 3 HOH A 99 399 109 HOH HOH . D 3 HOH A 100 400 89 HOH HOH . D 3 HOH A 101 401 37 HOH HOH . D 3 HOH A 102 402 59 HOH HOH . D 3 HOH A 103 403 50 HOH HOH . D 3 HOH A 104 404 104 HOH HOH . D 3 HOH A 105 405 80 HOH HOH . D 3 HOH A 106 406 44 HOH HOH . D 3 HOH A 107 407 98 HOH HOH . D 3 HOH A 108 408 55 HOH HOH . D 3 HOH A 109 409 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 2 -22.049 -9.246 5.565 1 64.35 ? S SO4 202 A 1 HETATM 2 O O1 SO4 . . . C 2 -21.634 -8.733 4.261 1 51.66 ? O1 SO4 202 A 1 HETATM 3 O O2 SO4 . . . C 2 -21.815 -10.688 5.614 1 59.06 ? O2 SO4 202 A 1 HETATM 4 O O3 SO4 . . . C 2 -23.471 -8.978 5.759 1 78.39 ? O3 SO4 202 A 1 HETATM 5 O O4 SO4 . . . C 2 -21.283 -8.59 6.623 1 53.25 ? O4 SO4 202 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #