data_5DA0 # _model_server_result.job_id 1Bxm8dNUaMYKk4HYIC10lA _model_server_result.datetime_utc '2024-12-31 04:34:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5da0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 5DA0 # _exptl.entry_id 5DA0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.09 _cell.angle_gamma 90 _cell.entry_id 5DA0 _cell.length_a 127.65 _cell.length_b 117.28 _cell.length_c 84.36 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DA0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 25 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 25 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 99 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 99 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.032 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 83 n n C40 C43 DMU sing 84 n n C37 C34 DMU sing 85 n n C34 C31 DMU sing 86 n n C31 C28 DMU sing 87 n n C28 C25 DMU sing 88 n n C22 C25 DMU sing 89 n n C22 C19 DMU sing 90 n n O61 C57 DMU sing 91 n n O4 C7 DMU sing 92 n n C18 C19 DMU sing 93 n n C18 O16 DMU sing 94 n n O5 C6 DMU sing 95 n n O5 C4 DMU sing 96 n n C57 C4 DMU sing 97 n n C6 O16 DMU sing 98 n n C6 C1 DMU sing 99 n n C7 C5 DMU sing 100 n n C7 C8 DMU sing 101 n n C4 C3 DMU sing 102 n n O1 C10 DMU sing 103 n n O1 C9 DMU sing 104 n n C10 C5 DMU sing 105 n n C10 O7 DMU sing 106 n n C5 O3 DMU sing 107 n n O49 C1 DMU sing 108 n n C8 C9 DMU sing 109 n n C8 O2 DMU sing 110 n n C1 C2 DMU sing 111 n n C11 C9 DMU sing 112 n n C11 O6 DMU sing 113 n n C3 O7 DMU sing 114 n n C3 C2 DMU sing 115 n n C2 O55 DMU sing 116 n n C1 H1 DMU sing 117 n n C2 H2 DMU sing 118 n n C3 H3 DMU sing 119 n n C4 H4 DMU sing 120 n n C6 H5 DMU sing 121 n n C18 H6 DMU sing 122 n n C18 H7 DMU sing 123 n n C19 H8 DMU sing 124 n n C19 H9 DMU sing 125 n n C22 H10 DMU sing 126 n n C22 H11 DMU sing 127 n n C25 H12 DMU sing 128 n n C25 H13 DMU sing 129 n n C28 H14 DMU sing 130 n n C28 H15 DMU sing 131 n n C31 H16 DMU sing 132 n n C31 H17 DMU sing 133 n n C34 H18 DMU sing 134 n n C34 H19 DMU sing 135 n n C37 H20 DMU sing 136 n n C37 H21 DMU sing 137 n n C40 H22 DMU sing 138 n n C40 H23 DMU sing 139 n n C43 H24 DMU sing 140 n n C43 H25 DMU sing 141 n n C43 H26 DMU sing 142 n n O49 H27 DMU sing 143 n n O55 H28 DMU sing 144 n n C57 H29 DMU sing 145 n n C57 H30 DMU sing 146 n n O61 H31 DMU sing 147 n n C5 H32 DMU sing 148 n n C7 H33 DMU sing 149 n n C8 H34 DMU sing 150 n n C9 H35 DMU sing 151 n n C10 H36 DMU sing 152 n n O2 H37 DMU sing 153 n n O3 H38 DMU sing 154 n n O4 H39 DMU sing 155 n n C11 H40 DMU sing 156 n n C11 H41 DMU sing 157 n n O6 H42 DMU sing 158 n n # _atom_sites.entry_id 5DA0 _atom_sites.fract_transf_matrix[1][1] 0.007834 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001395 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008527 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01204 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DMU A 1 601 1 DMU DMU . D 3 DMU A 1 602 2 DMU DMU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . C 3 53.014 28.814 52.984 1 122.87 ? C1 DMU 601 A 1 HETATM 2 C C2 DMU . . . C 3 53.952 29.81 53.585 1 125.21 ? C2 DMU 601 A 1 HETATM 3 C C3 DMU . . . C 3 53.737 30.029 54.999 1 129.71 ? C3 DMU 601 A 1 HETATM 4 C C4 DMU . . . C 3 53.724 28.765 55.766 1 126.74 ? C4 DMU 601 A 1 HETATM 5 O O5 DMU . . . C 3 52.804 27.747 55.187 1 115.24 ? O5 DMU 601 A 1 HETATM 6 C C6 DMU . . . C 3 53.044 27.465 53.722 1 116.32 ? C6 DMU 601 A 1 HETATM 7 O O7 DMU . . . C 3 54.86 30.952 55.492 1 140.14 ? O7 DMU 601 A 1 HETATM 8 O O16 DMU . . . C 3 52.079 26.674 53.258 1 128.58 ? O16 DMU 601 A 1 HETATM 9 C C18 DMU . . . C 3 52.037 25.367 53.904 1 115.54 ? C18 DMU 601 A 1 HETATM 10 C C19 DMU . . . C 3 50.572 24.976 54.181 1 110.23 ? C19 DMU 601 A 1 HETATM 11 C C22 DMU . . . C 3 50.512 23.456 54.521 1 109.27 ? C22 DMU 601 A 1 HETATM 12 C C25 DMU . . . C 3 49.575 23.223 55.721 1 110.43 ? C25 DMU 601 A 1 HETATM 13 C C28 DMU . . . C 3 48.101 23.052 55.213 1 112.29 ? C28 DMU 601 A 1 HETATM 14 C C31 DMU . . . C 3 47.247 22.387 56.327 1 109.88 ? C31 DMU 601 A 1 HETATM 15 C C34 DMU . . . C 3 46.104 21.579 55.682 1 107.99 ? C34 DMU 601 A 1 HETATM 16 C C37 DMU . . . C 3 45.847 20.324 56.515 1 114.93 ? C37 DMU 601 A 1 HETATM 17 C C40 DMU . . . C 3 45.147 19.282 55.662 1 117.3 ? C40 DMU 601 A 1 HETATM 18 C C43 DMU . . . C 3 45.059 17.975 56.441 1 127.52 ? C43 DMU 601 A 1 HETATM 19 O O49 DMU . . . C 3 53.382 28.599 51.632 1 123.04 ? O49 DMU 601 A 1 HETATM 20 O O55 DMU . . . C 3 53.79 31.072 52.881 1 126.05 ? O55 DMU 601 A 1 HETATM 21 C C57 DMU . . . C 3 53.281 29.005 57.201 1 119.73 ? C57 DMU 601 A 1 HETATM 22 O O61 DMU . . . C 3 52.743 27.788 57.745 1 108.25 ? O61 DMU 601 A 1 HETATM 23 C C5 DMU . . . C 3 54.427 33.301 55.183 1 141.37 ? C5 DMU 601 A 1 HETATM 24 C C7 DMU . . . C 3 55.793 33.68 54.878 1 143.42 ? C7 DMU 601 A 1 HETATM 25 C C8 DMU . . . C 3 56.561 33.966 56.096 1 144.19 ? C8 DMU 601 A 1 HETATM 26 C C9 DMU . . . C 3 56.557 32.769 57.086 1 138.43 ? C9 DMU 601 A 1 HETATM 27 O O1 DMU . . . C 3 55.096 32.371 57.337 1 138.78 ? O1 DMU 601 A 1 HETATM 28 C C10 DMU . . . C 3 54.346 32.133 56.106 1 143.64 ? C10 DMU 601 A 1 HETATM 29 O O2 DMU . . . C 3 57.923 34.274 55.731 1 137.8 ? O2 DMU 601 A 1 HETATM 30 O O3 DMU . . . C 3 53.712 33.015 53.923 1 129.72 ? O3 DMU 601 A 1 HETATM 31 O O4 DMU . . . C 3 55.766 34.91 54.012 1 140.5 ? O4 DMU 601 A 1 HETATM 32 C C11 DMU . . . C 3 57.169 33.142 58.281 1 142.84 ? C11 DMU 601 A 1 HETATM 33 O O6 DMU . . . C 3 56.389 32.681 59.378 1 151.48 ? O6 DMU 601 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #