data_5DA8
#
_model_server_result.job_id            Ua-McsBtmsU8dEPVQoYAUw 
_model_server_result.datetime_utc      '2024-10-19 04:49:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5da8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"IA","auth_seq_id":601}' 
#
_entry.id    5DA8 
#
_exptl.entry_id    5DA8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    21 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         75.46 
_cell.angle_beta          90.51 
_cell.angle_gamma         91.22 
_cell.entry_id            5DA8 
_cell.length_a            138.996 
_cell.length_b            159.781 
_cell.length_c            228.823 
_cell.Z_PDB               28 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DA8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetradecameric 14 author_and_software_defined_assembly 1 
PISA tetradecameric 14 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC 1 1 
O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 CA N N 
? 2 EA N N 
? 2 GA N N 
? 2 HA N N 
? 2 IA N N 
? 2 JA N N 
? 2 LA N N 
? 2 PA N N 
? 2 RA N N 
? 2 TA N N 
? 2 VA N N 
? 2 XA N N 
? 2 ZA N N 
? 2 EB N N 
? 2 IB N N 
? 2 KB N N 
? 2 NB N N 
? 2 PB N N 
? 2 RB N N 
? 2 TB N N 
? 2 VB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O LYS 43 A LYS 43 1_555 DA CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? 
metalc ? metalc2 B O LYS 43 B LYS 43 1_555 FA CA CA . B CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? 
metalc ? metalc3 H O THR 30 H THR 30 1_555 NA MG MG . H MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? 
metalc ? metalc4 H O GLY 32 H GLY 32 1_555 NA MG MG . H MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.997 ? 
metalc ? metalc5 H O LYS 51 H LYS 51 1_555 NA MG MG . H MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.967 ? 
metalc ? metalc6 K O LYS 43 K LYS 43 1_555 SA CA CA . K CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? 
metalc ? metalc7 M O THR 30 M THR 30 1_555 UA MG MG . M MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc8 M O LYS 43 M LYS 43 1_555 WA CA CA . M CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? 
metalc ? metalc9 M O LYS 51 M LYS 51 1_555 UA MG MG . M MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc10 O O LYS 43 O LYS 43 1_555 YA CA CA . O CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? 
metalc ? metalc11 Q O THR 30 Q THR 30 1_555 BB MG MG . Q MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc12 Q OG1 THR 30 Q THR 30 1_555 BB MG MG . Q MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? 
metalc ? metalc13 Q O LYS 51 Q LYS 51 1_555 BB MG MG . Q MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc14 R O THR 30 R THR 30 1_555 DB MG MG . R MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc15 R O GLY 32 R GLY 32 1_555 DB MG MG . R MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.982 ? 
metalc ? metalc16 R O LYS 43 R LYS 43 1_555 FB CA CA . R CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? 
metalc ? metalc17 S O THR 30 S THR 30 1_555 GB MG MG . S MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc18 S O GLY 32 S GLY 32 1_555 GB MG MG . S MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? 
metalc ? metalc19 S O LYS 51 S LYS 51 1_555 GB MG MG . S MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? 
metalc ? metalc20 V O THR 30 V THR 30 1_555 MB MG MG . V MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc21 V OG1 THR 30 V THR 30 1_555 MB MG MG . V MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? 
metalc ? metalc22 V O LYS 51 V LYS 51 1_555 MB MG MG . V MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc23 Z O LYS 43 Z LYS 43 1_555 SB CA CA . Z CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 277 n n 
S O2 SO4 doub 278 n n 
S O3 SO4 sing 279 n n 
S O4 SO4 sing 280 n n 
#
_atom_sites.entry_id                     5DA8 
_atom_sites.fract_transf_matrix[1][1]    0.007194 
_atom_sites.fract_transf_matrix[1][2]    0.000153 
_atom_sites.fract_transf_matrix[1][3]    0.000026 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00626 
_atom_sites.fract_transf_matrix[2][3]    -0.001623 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004515 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
CA 2 SO4 A 1 601 601 SO4 SO4 . 
DA 3 CA A 1 602 602 CA CA . 
EA 2 SO4 B 1 601 601 SO4 SO4 . 
FA 3 CA B 1 602 602 CA CA . 
GA 2 SO4 C 1 601 601 SO4 SO4 . 
HA 2 SO4 D 1 601 601 SO4 SO4 . 
IA 2 SO4 E 1 601 601 SO4 SO4 . 
JA 2 SO4 F 1 601 601 SO4 SO4 . 
KA 3 CA F 1 602 602 CA CA . 
LA 2 SO4 G 1 601 601 SO4 SO4 . 
MA 3 CA G 1 602 602 CA CA . 
NA 4 MG H 1 601 601 MG MG . 
OA 3 CA I 1 601 601 CA CA . 
PA 2 SO4 J 1 601 601 SO4 SO4 . 
QA 3 CA J 1 602 602 CA CA . 
RA 2 SO4 K 1 601 601 SO4 SO4 . 
SA 3 CA K 1 602 602 CA CA . 
TA 2 SO4 L 1 601 601 SO4 SO4 . 
UA 4 MG M 1 601 601 MG MG . 
VA 2 SO4 M 1 602 602 SO4 SO4 . 
WA 3 CA M 1 603 603 CA CA . 
XA 2 SO4 N 1 601 601 SO4 SO4 . 
YA 3 CA O 1 601 601 CA CA . 
ZA 2 SO4 P 1 601 601 SO4 SO4 . 
AB 3 CA P 1 602 602 CA CA . 
BB 4 MG Q 1 601 601 MG MG . 
CB 3 CA Q 1 602 602 CA CA . 
DB 4 MG R 1 601 601 MG MG . 
EB 2 SO4 R 1 602 602 SO4 SO4 . 
FB 3 CA R 1 603 603 CA CA . 
GB 4 MG S 1 601 601 MG MG . 
HB 4 MG T 1 601 601 MG MG . 
IB 2 SO4 T 1 602 602 SO4 SO4 . 
JB 3 CA T 1 603 603 CA CA . 
KB 2 SO4 U 1 601 601 SO4 SO4 . 
LB 3 CA U 1 602 602 CA CA . 
MB 4 MG V 1 601 601 MG MG . 
NB 2 SO4 V 1 602 602 SO4 SO4 . 
OB 3 CA V 1 603 603 CA CA . 
PB 2 SO4 Y 1 601 601 SO4 SO4 . 
QB 3 CA Y 1 602 602 CA CA . 
RB 2 SO4 Z 1 601 601 SO4 SO4 . 
SB 3 CA Z 1 602 602 CA CA . 
TB 2 SO4 a 1 601 601 SO4 SO4 . 
UB 3 CA a 1 602 602 CA CA . 
VB 2 SO4 b 1 601 601 SO4 SO4 . 
WB 5 HOH A 1 701 701 HOH HOH . 
WB 5 HOH A 2 702 702 HOH HOH . 
WB 5 HOH A 3 703 703 HOH HOH . 
XB 5 HOH B 1 701 701 HOH HOH . 
XB 5 HOH B 2 702 702 HOH HOH . 
YB 5 HOH C 1 701 701 HOH HOH . 
ZB 5 HOH D 1 701 701 HOH HOH . 
ZB 5 HOH D 2 702 702 HOH HOH . 
AC 5 HOH E 1 701 701 HOH HOH . 
AC 5 HOH E 2 702 702 HOH HOH . 
BC 5 HOH F 1 701 701 HOH HOH . 
BC 5 HOH F 2 702 702 HOH HOH . 
CC 5 HOH H 1 701 701 HOH HOH . 
DC 5 HOH I 1 701 701 HOH HOH . 
DC 5 HOH I 2 702 702 HOH HOH . 
DC 5 HOH I 3 703 703 HOH HOH . 
EC 5 HOH J 1 701 701 HOH HOH . 
EC 5 HOH J 2 702 702 HOH HOH . 
EC 5 HOH J 3 703 703 HOH HOH . 
FC 5 HOH L 1 701 701 HOH HOH . 
FC 5 HOH L 2 702 702 HOH HOH . 
FC 5 HOH L 3 703 703 HOH HOH . 
GC 5 HOH N 1 701 701 HOH HOH . 
GC 5 HOH N 2 702 702 HOH HOH . 
HC 5 HOH O 1 701 701 HOH HOH . 
HC 5 HOH O 2 702 702 HOH HOH . 
HC 5 HOH O 3 703 703 HOH HOH . 
IC 5 HOH P 1 701 701 HOH HOH . 
IC 5 HOH P 2 702 702 HOH HOH . 
JC 5 HOH Q 1 701 701 HOH HOH . 
JC 5 HOH Q 2 702 702 HOH HOH . 
JC 5 HOH Q 3 703 703 HOH HOH . 
KC 5 HOH R 1 701 701 HOH HOH . 
LC 5 HOH S 1 701 701 HOH HOH . 
LC 5 HOH S 2 702 702 HOH HOH . 
LC 5 HOH S 3 703 703 HOH HOH . 
MC 5 HOH U 1 701 701 HOH HOH . 
NC 5 HOH V 1 701 701 HOH HOH . 
NC 5 HOH V 2 702 702 HOH HOH . 
OC 5 HOH W 1 601 601 HOH HOH . 
OC 5 HOH W 2 602 602 HOH HOH . 
PC 5 HOH X 1 601 601 HOH HOH . 
PC 5 HOH X 2 602 602 HOH HOH . 
PC 5 HOH X 3 603 603 HOH HOH . 
PC 5 HOH X 4 604 604 HOH HOH . 
PC 5 HOH X 5 605 605 HOH HOH . 
QC 5 HOH Y 1 701 701 HOH HOH . 
QC 5 HOH Y 2 702 702 HOH HOH . 
QC 5 HOH Y 3 703 703 HOH HOH . 
RC 5 HOH Z 1 701 701 HOH HOH . 
SC 5 HOH a 1 701 701 HOH HOH . 
TC 5 HOH b 1 701 701 HOH HOH . 
TC 5 HOH b 2 702 702 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . IA 2 39.567 21.055 -17.721 0.57 63.24 ? S SO4 601 E 1 
HETATM 2 O O1 SO4 . . . IA 2 40.953 20.843 -17.312 0.57 60.24 ? O1 SO4 601 E 1 
HETATM 3 O O2 SO4 . . . IA 2 38.683 20.801 -16.586 0.57 47.36 ? O2 SO4 601 E 1 
HETATM 4 O O3 SO4 . . . IA 2 39.401 22.433 -18.176 0.57 43.16 ? O3 SO4 601 E 1 
HETATM 5 O O4 SO4 . . . IA 2 39.233 20.139 -18.808 0.57 62.35 ? O4 SO4 601 E 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    540 
_model_server_stats.query_time_ms           348 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           5 
#