data_5DB1 # _model_server_result.job_id tMmUOgiw8J1TfiqbVIbP7Q _model_server_result.datetime_utc '2024-12-23 05:50:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5db1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":605}' # _entry.id 5DB1 # _exptl.entry_id 5DB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5DB1 _cell.length_a 48.318 _cell.length_b 79.816 _cell.length_c 124.78 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 391 n n S O2 SO4 doub 392 n n S O3 SO4 sing 393 n n S O4 SO4 sing 394 n n # _atom_sites.entry_id 5DB1 _atom_sites.fract_transf_matrix[1][1] 0.020696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012529 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 58O A 1 601 1 58O DRG . C 3 DMS A 1 602 1 DMS DMS . D 4 SO4 A 1 603 1 SO4 SO4 . E 4 SO4 A 1 604 2 SO4 SO4 . F 4 SO4 A 1 605 3 SO4 SO4 . G 4 SO4 A 1 606 4 SO4 SO4 . H 4 SO4 A 1 607 5 SO4 SO4 . I 5 PG4 A 1 608 1 PG4 PGD . J 5 PG4 A 1 609 1 PG4 PGD . K 3 DMS A 1 610 1 DMS DMS . L 3 DMS A 1 611 1 DMS DMS . M 5 PG4 A 1 612 1 PG4 PGD . N 6 HOH A 1 701 1 HOH HOH . N 6 HOH A 2 702 1 HOH HOH . N 6 HOH A 3 703 61 HOH HOH . N 6 HOH A 4 704 106 HOH HOH . N 6 HOH A 5 705 52 HOH HOH . N 6 HOH A 6 706 104 HOH HOH . N 6 HOH A 7 707 93 HOH HOH . N 6 HOH A 8 708 25 HOH HOH . N 6 HOH A 9 709 2 HOH HOH . N 6 HOH A 10 710 86 HOH HOH . N 6 HOH A 11 711 149 HOH HOH . N 6 HOH A 12 712 82 HOH HOH . N 6 HOH A 13 713 4 HOH HOH . N 6 HOH A 14 714 108 HOH HOH . N 6 HOH A 15 715 61 HOH HOH . N 6 HOH A 16 716 138 HOH HOH . N 6 HOH A 17 717 33 HOH HOH . N 6 HOH A 18 718 85 HOH HOH . N 6 HOH A 19 719 23 HOH HOH . N 6 HOH A 20 720 131 HOH HOH . N 6 HOH A 21 721 9 HOH HOH . N 6 HOH A 22 722 209 HOH HOH . N 6 HOH A 23 723 55 HOH HOH . N 6 HOH A 24 724 112 HOH HOH . N 6 HOH A 25 725 46 HOH HOH . N 6 HOH A 26 726 58 HOH HOH . N 6 HOH A 27 727 184 HOH HOH . N 6 HOH A 28 728 80 HOH HOH . N 6 HOH A 29 729 173 HOH HOH . N 6 HOH A 30 730 3 HOH HOH . N 6 HOH A 31 731 134 HOH HOH . N 6 HOH A 32 732 66 HOH HOH . N 6 HOH A 33 733 12 HOH HOH . N 6 HOH A 34 734 98 HOH HOH . N 6 HOH A 35 735 136 HOH HOH . N 6 HOH A 36 736 41 HOH HOH . N 6 HOH A 37 737 122 HOH HOH . N 6 HOH A 38 738 36 HOH HOH . N 6 HOH A 39 739 87 HOH HOH . N 6 HOH A 40 740 71 HOH HOH . N 6 HOH A 41 741 64 HOH HOH . N 6 HOH A 42 742 109 HOH HOH . N 6 HOH A 43 743 22 HOH HOH . N 6 HOH A 44 744 8 HOH HOH . N 6 HOH A 45 745 64 HOH HOH . N 6 HOH A 46 746 105 HOH HOH . N 6 HOH A 47 747 31 HOH HOH . N 6 HOH A 48 748 73 HOH HOH . N 6 HOH A 49 749 58 HOH HOH . N 6 HOH A 50 750 39 HOH HOH . N 6 HOH A 51 751 30 HOH HOH . N 6 HOH A 52 752 59 HOH HOH . N 6 HOH A 53 753 48 HOH HOH . N 6 HOH A 54 754 45 HOH HOH . N 6 HOH A 55 755 109 HOH HOH . N 6 HOH A 56 756 9 HOH HOH . N 6 HOH A 57 757 96 HOH HOH . N 6 HOH A 58 758 5 HOH HOH . N 6 HOH A 59 759 68 HOH HOH . N 6 HOH A 60 760 1 HOH HOH . N 6 HOH A 61 761 177 HOH HOH . N 6 HOH A 62 762 59 HOH HOH . N 6 HOH A 63 763 53 HOH HOH . N 6 HOH A 64 764 37 HOH HOH . N 6 HOH A 65 765 3 HOH HOH . N 6 HOH A 66 766 83 HOH HOH . N 6 HOH A 67 767 42 HOH HOH . N 6 HOH A 68 768 43 HOH HOH . N 6 HOH A 69 769 85 HOH HOH . N 6 HOH A 70 770 86 HOH HOH . N 6 HOH A 71 771 40 HOH HOH . N 6 HOH A 72 772 45 HOH HOH . N 6 HOH A 73 773 21 HOH HOH . N 6 HOH A 74 774 90 HOH HOH . N 6 HOH A 75 775 4 HOH HOH . N 6 HOH A 76 776 53 HOH HOH . N 6 HOH A 77 777 95 HOH HOH . N 6 HOH A 78 778 35 HOH HOH . N 6 HOH A 79 779 171 HOH HOH . N 6 HOH A 80 780 19 HOH HOH . N 6 HOH A 81 781 79 HOH HOH . N 6 HOH A 82 782 10 HOH HOH . N 6 HOH A 83 783 35 HOH HOH . N 6 HOH A 84 784 70 HOH HOH . N 6 HOH A 85 785 113 HOH HOH . N 6 HOH A 86 786 23 HOH HOH . N 6 HOH A 87 787 32 HOH HOH . N 6 HOH A 88 788 39 HOH HOH . N 6 HOH A 89 789 71 HOH HOH . N 6 HOH A 90 790 56 HOH HOH . N 6 HOH A 91 791 167 HOH HOH . N 6 HOH A 92 792 98 HOH HOH . N 6 HOH A 93 793 6 HOH HOH . N 6 HOH A 94 794 90 HOH HOH . N 6 HOH A 95 795 24 HOH HOH . N 6 HOH A 96 796 27 HOH HOH . N 6 HOH A 97 797 158 HOH HOH . N 6 HOH A 98 798 65 HOH HOH . N 6 HOH A 99 799 165 HOH HOH . N 6 HOH A 100 800 114 HOH HOH . N 6 HOH A 101 801 156 HOH HOH . N 6 HOH A 102 802 27 HOH HOH . N 6 HOH A 103 803 63 HOH HOH . N 6 HOH A 104 804 91 HOH HOH . N 6 HOH A 105 805 106 HOH HOH . N 6 HOH A 106 806 180 HOH HOH . N 6 HOH A 107 807 91 HOH HOH . N 6 HOH A 108 808 142 HOH HOH . N 6 HOH A 109 809 20 HOH HOH . N 6 HOH A 110 810 2 HOH HOH . N 6 HOH A 111 811 33 HOH HOH . N 6 HOH A 112 812 28 HOH HOH . N 6 HOH A 113 813 24 HOH HOH . N 6 HOH A 114 814 21 HOH HOH . N 6 HOH A 115 815 92 HOH HOH . N 6 HOH A 116 816 7 HOH HOH . N 6 HOH A 117 817 49 HOH HOH . N 6 HOH A 118 818 26 HOH HOH . N 6 HOH A 119 819 22 HOH HOH . N 6 HOH A 120 820 74 HOH HOH . N 6 HOH A 121 821 81 HOH HOH . N 6 HOH A 122 822 119 HOH HOH . N 6 HOH A 123 823 25 HOH HOH . N 6 HOH A 124 824 73 HOH HOH . N 6 HOH A 125 825 26 HOH HOH . N 6 HOH A 126 826 80 HOH HOH . N 6 HOH A 127 827 112 HOH HOH . N 6 HOH A 128 828 55 HOH HOH . N 6 HOH A 129 829 57 HOH HOH . N 6 HOH A 130 830 162 HOH HOH . N 6 HOH A 131 831 72 HOH HOH . N 6 HOH A 132 832 67 HOH HOH . N 6 HOH A 133 833 44 HOH HOH . N 6 HOH A 134 834 118 HOH HOH . N 6 HOH A 135 835 89 HOH HOH . N 6 HOH A 136 836 31 HOH HOH . N 6 HOH A 137 837 77 HOH HOH . N 6 HOH A 138 838 8 HOH HOH . N 6 HOH A 139 839 125 HOH HOH . N 6 HOH A 140 840 75 HOH HOH . N 6 HOH A 141 841 135 HOH HOH . N 6 HOH A 142 842 137 HOH HOH . N 6 HOH A 143 843 11 HOH HOH . N 6 HOH A 144 844 15 HOH HOH . N 6 HOH A 145 845 54 HOH HOH . N 6 HOH A 146 846 67 HOH HOH . N 6 HOH A 147 847 88 HOH HOH . N 6 HOH A 148 848 121 HOH HOH . N 6 HOH A 149 849 79 HOH HOH . N 6 HOH A 150 850 57 HOH HOH . N 6 HOH A 151 851 2 HOH HOH . N 6 HOH A 152 852 16 HOH HOH . N 6 HOH A 153 853 63 HOH HOH . N 6 HOH A 154 854 10 HOH HOH . N 6 HOH A 155 855 29 HOH HOH . N 6 HOH A 156 856 51 HOH HOH . N 6 HOH A 157 857 97 HOH HOH . N 6 HOH A 158 858 65 HOH HOH . N 6 HOH A 159 859 12 HOH HOH . N 6 HOH A 160 860 99 HOH HOH . N 6 HOH A 161 861 44 HOH HOH . N 6 HOH A 162 862 15 HOH HOH . N 6 HOH A 163 863 16 HOH HOH . N 6 HOH A 164 864 7 HOH HOH . N 6 HOH A 165 865 42 HOH HOH . N 6 HOH A 166 866 17 HOH HOH . N 6 HOH A 167 867 52 HOH HOH . N 6 HOH A 168 868 30 HOH HOH . N 6 HOH A 169 869 28 HOH HOH . N 6 HOH A 170 870 144 HOH HOH . N 6 HOH A 171 871 13 HOH HOH . N 6 HOH A 172 872 84 HOH HOH . N 6 HOH A 173 873 49 HOH HOH . N 6 HOH A 174 874 62 HOH HOH . N 6 HOH A 175 875 124 HOH HOH . N 6 HOH A 176 876 6 HOH HOH . N 6 HOH A 177 877 4 HOH HOH . N 6 HOH A 178 878 160 HOH HOH . N 6 HOH A 179 879 159 HOH HOH . N 6 HOH A 180 880 56 HOH HOH . N 6 HOH A 181 881 102 HOH HOH . N 6 HOH A 182 882 210 HOH HOH . N 6 HOH A 183 883 179 HOH HOH . N 6 HOH A 184 884 99 HOH HOH . N 6 HOH A 185 885 18 HOH HOH . N 6 HOH A 186 886 46 HOH HOH . N 6 HOH A 187 887 69 HOH HOH . N 6 HOH A 188 888 47 HOH HOH . N 6 HOH A 189 889 36 HOH HOH . N 6 HOH A 190 890 40 HOH HOH . N 6 HOH A 191 891 82 HOH HOH . N 6 HOH A 192 892 110 HOH HOH . N 6 HOH A 193 893 78 HOH HOH . N 6 HOH A 194 894 34 HOH HOH . N 6 HOH A 195 895 133 HOH HOH . N 6 HOH A 196 896 140 HOH HOH . N 6 HOH A 197 897 38 HOH HOH . N 6 HOH A 198 898 69 HOH HOH . N 6 HOH A 199 899 72 HOH HOH . N 6 HOH A 200 900 118 HOH HOH . N 6 HOH A 201 901 62 HOH HOH . N 6 HOH A 202 902 37 HOH HOH . N 6 HOH A 203 903 148 HOH HOH . N 6 HOH A 204 904 95 HOH HOH . N 6 HOH A 205 905 153 HOH HOH . N 6 HOH A 206 906 151 HOH HOH . N 6 HOH A 207 907 139 HOH HOH . N 6 HOH A 208 908 54 HOH HOH . N 6 HOH A 209 909 41 HOH HOH . N 6 HOH A 210 910 115 HOH HOH . N 6 HOH A 211 911 48 HOH HOH . N 6 HOH A 212 912 19 HOH HOH . N 6 HOH A 213 913 101 HOH HOH . N 6 HOH A 214 914 100 HOH HOH . N 6 HOH A 215 915 168 HOH HOH . N 6 HOH A 216 916 76 HOH HOH . N 6 HOH A 217 917 141 HOH HOH . N 6 HOH A 218 918 60 HOH HOH . N 6 HOH A 219 919 186 HOH HOH . N 6 HOH A 220 920 81 HOH HOH . N 6 HOH A 221 921 116 HOH HOH . N 6 HOH A 222 922 111 HOH HOH . N 6 HOH A 223 923 78 HOH HOH . N 6 HOH A 224 924 88 HOH HOH . N 6 HOH A 225 925 5 HOH HOH . N 6 HOH A 226 926 34 HOH HOH . N 6 HOH A 227 927 14 HOH HOH . N 6 HOH A 228 928 32 HOH HOH . N 6 HOH A 229 929 110 HOH HOH . N 6 HOH A 230 930 94 HOH HOH . N 6 HOH A 231 931 161 HOH HOH . N 6 HOH A 232 932 66 HOH HOH . N 6 HOH A 233 933 143 HOH HOH . N 6 HOH A 234 934 182 HOH HOH . N 6 HOH A 235 935 127 HOH HOH . N 6 HOH A 236 936 100 HOH HOH . N 6 HOH A 237 937 145 HOH HOH . N 6 HOH A 238 938 77 HOH HOH . N 6 HOH A 239 939 117 HOH HOH . N 6 HOH A 240 940 87 HOH HOH . N 6 HOH A 241 941 92 HOH HOH . N 6 HOH A 242 942 108 HOH HOH . N 6 HOH A 243 943 208 HOH HOH . N 6 HOH A 244 944 101 HOH HOH . N 6 HOH A 245 945 152 HOH HOH . N 6 HOH A 246 946 146 HOH HOH . N 6 HOH A 247 947 89 HOH HOH . N 6 HOH A 248 948 103 HOH HOH . N 6 HOH A 249 949 17 HOH HOH . N 6 HOH A 250 950 113 HOH HOH . N 6 HOH A 251 951 97 HOH HOH . N 6 HOH A 252 952 114 HOH HOH . N 6 HOH A 253 953 51 HOH HOH . N 6 HOH A 254 954 128 HOH HOH . N 6 HOH A 255 955 132 HOH HOH . N 6 HOH A 256 956 50 HOH HOH . N 6 HOH A 257 957 175 HOH HOH . N 6 HOH A 258 958 18 HOH HOH . N 6 HOH A 259 959 29 HOH HOH . N 6 HOH A 260 960 204 HOH HOH . N 6 HOH A 261 961 74 HOH HOH . N 6 HOH A 262 962 60 HOH HOH . N 6 HOH A 263 963 120 HOH HOH . N 6 HOH A 264 964 76 HOH HOH . N 6 HOH A 265 965 94 HOH HOH . N 6 HOH A 266 966 123 HOH HOH . N 6 HOH A 267 967 13 HOH HOH . N 6 HOH A 268 968 185 HOH HOH . N 6 HOH A 269 969 195 HOH HOH . N 6 HOH A 270 970 147 HOH HOH . N 6 HOH A 271 971 84 HOH HOH . N 6 HOH A 272 972 96 HOH HOH . N 6 HOH A 273 973 107 HOH HOH . N 6 HOH A 274 974 47 HOH HOH . N 6 HOH A 275 975 3 HOH HOH . N 6 HOH A 276 976 198 HOH HOH . N 6 HOH A 277 977 200 HOH HOH . N 6 HOH A 278 978 129 HOH HOH . N 6 HOH A 279 979 117 HOH HOH . N 6 HOH A 280 980 93 HOH HOH . N 6 HOH A 281 981 164 HOH HOH . N 6 HOH A 282 982 43 HOH HOH . N 6 HOH A 283 983 75 HOH HOH . N 6 HOH A 284 984 196 HOH HOH . N 6 HOH A 285 985 130 HOH HOH . N 6 HOH A 286 986 163 HOH HOH . N 6 HOH A 287 987 154 HOH HOH . N 6 HOH A 288 988 189 HOH HOH . N 6 HOH A 289 989 104 HOH HOH . N 6 HOH A 290 990 188 HOH HOH . N 6 HOH A 291 991 150 HOH HOH . N 6 HOH A 292 992 105 HOH HOH . N 6 HOH A 293 993 176 HOH HOH . N 6 HOH A 294 994 199 HOH HOH . N 6 HOH A 295 995 14 HOH HOH . N 6 HOH A 296 996 183 HOH HOH . N 6 HOH A 297 997 194 HOH HOH . N 6 HOH A 298 998 191 HOH HOH . N 6 HOH A 299 999 193 HOH HOH . N 6 HOH A 300 1000 107 HOH HOH . N 6 HOH A 301 1001 166 HOH HOH . N 6 HOH A 302 1002 190 HOH HOH . N 6 HOH A 303 1003 116 HOH HOH . N 6 HOH A 304 1004 203 HOH HOH . N 6 HOH A 305 1005 169 HOH HOH . N 6 HOH A 306 1006 206 HOH HOH . N 6 HOH A 307 1007 83 HOH HOH . N 6 HOH A 308 1008 103 HOH HOH . N 6 HOH A 309 1009 170 HOH HOH . N 6 HOH A 310 1010 205 HOH HOH . N 6 HOH A 311 1011 201 HOH HOH . N 6 HOH A 312 1012 187 HOH HOH . N 6 HOH A 313 1013 115 HOH HOH . N 6 HOH A 314 1014 207 HOH HOH . N 6 HOH A 315 1015 70 HOH HOH . N 6 HOH A 316 1016 197 HOH HOH . N 6 HOH A 317 1017 50 HOH HOH . N 6 HOH A 318 1018 155 HOH HOH . N 6 HOH A 319 1019 202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 4 -17.261 44.409 13.25 1 79.91 ? S SO4 605 A 1 HETATM 2 O O1 SO4 . . . F 4 -16.98 45.569 12.367 1 82.07 ? O1 SO4 605 A 1 HETATM 3 O O2 SO4 . . . F 4 -16.636 43.204 12.669 1 70.89 ? O2 SO4 605 A 1 HETATM 4 O O3 SO4 . . . F 4 -18.732 44.209 13.351 1 74.04 ? O3 SO4 605 A 1 HETATM 5 O O4 SO4 . . . F 4 -16.625 44.682 14.569 1 77.03 ? O4 SO4 605 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 441 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #