data_5DCX
#
_model_server_result.job_id            NQ4NxcTo0IlVBoK6IAy7XA 
_model_server_result.datetime_utc      '2025-04-12 09:18:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dcx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":301}' 
#
_entry.id    5DCX 
#
_exptl.entry_id    5DCX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    11 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.66 
_cell.angle_gamma         90 
_cell.entry_id            5DCX 
_cell.length_a            75.644 
_cell.length_b            178.706 
_cell.length_c            130.358 
_cell.Z_PDB               22 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DCX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
? monomeric 1 author_defined_assembly 7 
? monomeric 1 author_defined_assembly 8 
? monomeric 1 author_defined_assembly 9 
? monomeric 1 author_defined_assembly 10 
? monomeric 1 author_defined_assembly 11 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,L,W 1 1 
B,M,X 2 1 
C,N,Y 3 1 
D,O,Z 4 1 
E,P,AA 5 1 
F,Q,BA 6 1 
G,R,CA 7 1 
H,S,DA 8 1 
I,T,EA 9 1 
J,U,FA 10 1 
K,V,GA 11 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 86 A GLU 83 1_555 L MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc2 B OE2 GLU 86 B GLU 83 1_555 M MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc3 C OE1 GLU 86 C GLU 83 1_555 N MG MG . C MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc4 D OE1 GLU 86 D GLU 83 1_555 O MG MG . D MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc5 E OE2 GLU 86 E GLU 83 1_555 P MG MG . E MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc6 P MG MG . E MG 301 1_555 AA O HOH . E HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc7 F OE2 GLU 86 F GLU 83 1_555 Q MG MG . F MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
metalc ? metalc8 G OE2 GLU 86 G GLU 83 1_555 R MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc9 H OE2 GLU 86 H GLU 83 1_555 S MG MG . H MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc10 I OE2 GLU 86 I GLU 83 1_555 T MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc11 J OE2 GLU 86 J GLU 83 1_555 U MG MG . J MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? 
metalc ? metalc12 K OE2 GLU 86 K GLU 83 1_555 V MG MG . K MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5DCX 
_atom_sites.fract_transf_matrix[1][1]    0.01322 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000384 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005596 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007674 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
L 2 MG A 1 301 301 MG MG . 
M 2 MG B 1 301 301 MG MG . 
N 2 MG C 1 301 301 MG MG . 
O 2 MG D 1 301 301 MG MG . 
P 2 MG E 1 301 301 MG MG . 
Q 2 MG F 1 301 301 MG MG . 
R 2 MG G 1 301 301 MG MG . 
S 2 MG H 1 301 301 MG MG . 
T 2 MG I 1 301 301 MG MG . 
U 2 MG J 1 301 301 MG MG . 
V 2 MG K 1 301 301 MG MG . 
W 3 HOH A 1 401 127 HOH HOH . 
W 3 HOH A 2 402 1 HOH HOH . 
W 3 HOH A 3 403 7 HOH HOH . 
W 3 HOH A 4 404 2 HOH HOH . 
W 3 HOH A 5 405 76 HOH HOH . 
W 3 HOH A 6 406 3 HOH HOH . 
W 3 HOH A 7 407 13 HOH HOH . 
W 3 HOH A 8 408 128 HOH HOH . 
W 3 HOH A 9 409 29 HOH HOH . 
W 3 HOH A 10 410 82 HOH HOH . 
W 3 HOH A 11 411 5 HOH HOH . 
W 3 HOH A 12 412 6 HOH HOH . 
W 3 HOH A 13 413 97 HOH HOH . 
W 3 HOH A 14 414 14 HOH HOH . 
W 3 HOH A 15 415 4 HOH HOH . 
W 3 HOH A 16 416 10 HOH HOH . 
W 3 HOH A 17 417 125 HOH HOH . 
W 3 HOH A 18 418 11 HOH HOH . 
W 3 HOH A 19 419 126 HOH HOH . 
W 3 HOH A 20 420 12 HOH HOH . 
W 3 HOH A 21 421 123 HOH HOH . 
W 3 HOH A 22 422 8 HOH HOH . 
X 3 HOH B 1 401 112 HOH HOH . 
X 3 HOH B 2 402 40 HOH HOH . 
X 3 HOH B 3 403 41 HOH HOH . 
X 3 HOH B 4 404 39 HOH HOH . 
X 3 HOH B 5 405 52 HOH HOH . 
X 3 HOH B 6 406 47 HOH HOH . 
X 3 HOH B 7 407 35 HOH HOH . 
X 3 HOH B 8 408 43 HOH HOH . 
X 3 HOH B 9 409 48 HOH HOH . 
X 3 HOH B 10 410 53 HOH HOH . 
X 3 HOH B 11 411 49 HOH HOH . 
X 3 HOH B 12 412 50 HOH HOH . 
X 3 HOH B 13 413 38 HOH HOH . 
X 3 HOH B 14 414 59 HOH HOH . 
X 3 HOH B 15 415 62 HOH HOH . 
X 3 HOH B 16 416 58 HOH HOH . 
X 3 HOH B 17 417 120 HOH HOH . 
X 3 HOH B 18 418 61 HOH HOH . 
X 3 HOH B 19 419 117 HOH HOH . 
X 3 HOH B 20 420 114 HOH HOH . 
X 3 HOH B 21 421 122 HOH HOH . 
X 3 HOH B 22 422 66 HOH HOH . 
X 3 HOH B 23 423 45 HOH HOH . 
X 3 HOH B 24 424 46 HOH HOH . 
X 3 HOH B 25 425 60 HOH HOH . 
X 3 HOH B 26 426 44 HOH HOH . 
X 3 HOH B 27 427 51 HOH HOH . 
X 3 HOH B 28 428 63 HOH HOH . 
X 3 HOH B 29 429 57 HOH HOH . 
X 3 HOH B 30 430 119 HOH HOH . 
X 3 HOH B 31 431 118 HOH HOH . 
X 3 HOH B 32 432 115 HOH HOH . 
X 3 HOH B 33 433 111 HOH HOH . 
X 3 HOH B 34 434 116 HOH HOH . 
X 3 HOH B 35 435 113 HOH HOH . 
Y 3 HOH C 1 401 16 HOH HOH . 
Y 3 HOH C 2 402 106 HOH HOH . 
Y 3 HOH C 3 403 15 HOH HOH . 
Y 3 HOH C 4 404 25 HOH HOH . 
Y 3 HOH C 5 405 20 HOH HOH . 
Y 3 HOH C 6 406 64 HOH HOH . 
Y 3 HOH C 7 407 17 HOH HOH . 
Y 3 HOH C 8 408 23 HOH HOH . 
Y 3 HOH C 9 409 18 HOH HOH . 
Y 3 HOH C 10 410 109 HOH HOH . 
Y 3 HOH C 11 411 24 HOH HOH . 
Y 3 HOH C 12 412 19 HOH HOH . 
Y 3 HOH C 13 413 107 HOH HOH . 
Y 3 HOH C 14 414 65 HOH HOH . 
Y 3 HOH C 15 415 67 HOH HOH . 
Y 3 HOH C 16 416 110 HOH HOH . 
Z 3 HOH D 1 401 26 HOH HOH . 
Z 3 HOH D 2 402 27 HOH HOH . 
Z 3 HOH D 3 403 95 HOH HOH . 
Z 3 HOH D 4 404 94 HOH HOH . 
Z 3 HOH D 5 405 31 HOH HOH . 
Z 3 HOH D 6 406 34 HOH HOH . 
Z 3 HOH D 7 407 33 HOH HOH . 
Z 3 HOH D 8 408 146 HOH HOH . 
Z 3 HOH D 9 409 22 HOH HOH . 
Z 3 HOH D 10 410 93 HOH HOH . 
Z 3 HOH D 11 411 108 HOH HOH . 
Z 3 HOH D 12 412 21 HOH HOH . 
Z 3 HOH D 13 413 32 HOH HOH . 
Z 3 HOH D 14 414 91 HOH HOH . 
Z 3 HOH D 15 415 149 HOH HOH . 
Z 3 HOH D 16 416 28 HOH HOH . 
Z 3 HOH D 17 417 30 HOH HOH . 
Z 3 HOH D 18 418 167 HOH HOH . 
AA 3 HOH E 1 401 69 HOH HOH . 
AA 3 HOH E 2 402 132 HOH HOH . 
AA 3 HOH E 3 403 133 HOH HOH . 
AA 3 HOH E 4 404 54 HOH HOH . 
AA 3 HOH E 5 405 70 HOH HOH . 
AA 3 HOH E 6 406 55 HOH HOH . 
AA 3 HOH E 7 407 68 HOH HOH . 
AA 3 HOH E 8 408 131 HOH HOH . 
AA 3 HOH E 9 409 129 HOH HOH . 
AA 3 HOH E 10 410 135 HOH HOH . 
AA 3 HOH E 11 411 138 HOH HOH . 
AA 3 HOH E 12 412 140 HOH HOH . 
AA 3 HOH E 13 413 134 HOH HOH . 
AA 3 HOH E 14 414 56 HOH HOH . 
AA 3 HOH E 15 415 139 HOH HOH . 
AA 3 HOH E 16 416 137 HOH HOH . 
AA 3 HOH E 17 417 130 HOH HOH . 
AA 3 HOH E 18 418 71 HOH HOH . 
AA 3 HOH E 19 419 136 HOH HOH . 
BA 3 HOH F 1 401 147 HOH HOH . 
BA 3 HOH F 2 402 72 HOH HOH . 
BA 3 HOH F 3 403 145 HOH HOH . 
BA 3 HOH F 4 404 152 HOH HOH . 
BA 3 HOH F 5 405 73 HOH HOH . 
BA 3 HOH F 6 406 144 HOH HOH . 
BA 3 HOH F 7 407 154 HOH HOH . 
BA 3 HOH F 8 408 74 HOH HOH . 
BA 3 HOH F 9 409 75 HOH HOH . 
BA 3 HOH F 10 410 124 HOH HOH . 
BA 3 HOH F 11 411 77 HOH HOH . 
BA 3 HOH F 12 412 157 HOH HOH . 
BA 3 HOH F 13 413 153 HOH HOH . 
BA 3 HOH F 14 414 150 HOH HOH . 
BA 3 HOH F 15 415 155 HOH HOH . 
BA 3 HOH F 16 416 148 HOH HOH . 
BA 3 HOH F 17 417 151 HOH HOH . 
BA 3 HOH F 18 418 156 HOH HOH . 
CA 3 HOH G 1 401 161 HOH HOH . 
CA 3 HOH G 2 402 81 HOH HOH . 
CA 3 HOH G 3 403 163 HOH HOH . 
CA 3 HOH G 4 404 169 HOH HOH . 
CA 3 HOH G 5 405 79 HOH HOH . 
CA 3 HOH G 6 406 78 HOH HOH . 
CA 3 HOH G 7 407 160 HOH HOH . 
CA 3 HOH G 8 408 83 HOH HOH . 
CA 3 HOH G 9 409 166 HOH HOH . 
CA 3 HOH G 10 410 80 HOH HOH . 
CA 3 HOH G 11 411 164 HOH HOH . 
CA 3 HOH G 12 412 162 HOH HOH . 
CA 3 HOH G 13 413 158 HOH HOH . 
CA 3 HOH G 14 414 165 HOH HOH . 
CA 3 HOH G 15 415 159 HOH HOH . 
DA 3 HOH H 1 401 87 HOH HOH . 
DA 3 HOH H 2 402 85 HOH HOH . 
DA 3 HOH H 3 403 88 HOH HOH . 
DA 3 HOH H 4 404 142 HOH HOH . 
DA 3 HOH H 5 405 86 HOH HOH . 
DA 3 HOH H 6 406 84 HOH HOH . 
DA 3 HOH H 7 407 89 HOH HOH . 
DA 3 HOH H 8 408 90 HOH HOH . 
DA 3 HOH H 9 409 143 HOH HOH . 
DA 3 HOH H 10 410 92 HOH HOH . 
EA 3 HOH I 1 401 98 HOH HOH . 
EA 3 HOH I 2 402 141 HOH HOH . 
EA 3 HOH I 3 403 100 HOH HOH . 
EA 3 HOH I 4 404 96 HOH HOH . 
EA 3 HOH I 5 405 9 HOH HOH . 
EA 3 HOH I 6 406 99 HOH HOH . 
FA 3 HOH J 1 401 168 HOH HOH . 
FA 3 HOH J 2 402 103 HOH HOH . 
FA 3 HOH J 3 403 172 HOH HOH . 
FA 3 HOH J 4 404 104 HOH HOH . 
FA 3 HOH J 5 405 101 HOH HOH . 
FA 3 HOH J 6 406 170 HOH HOH . 
FA 3 HOH J 7 407 171 HOH HOH . 
FA 3 HOH J 8 408 37 HOH HOH . 
FA 3 HOH J 9 409 102 HOH HOH . 
FA 3 HOH J 10 410 36 HOH HOH . 
FA 3 HOH J 11 411 121 HOH HOH . 
GA 3 HOH K 1 401 42 HOH HOH . 
GA 3 HOH K 2 402 173 HOH HOH . 
GA 3 HOH K 3 403 105 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         U 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -2.52 
_atom_site.Cartn_y               -4.706 
_atom_site.Cartn_z               19.074 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        48.58 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          J 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#