data_5DDD
#
_model_server_result.job_id            DDognHqSqSjQ_PfVlUK-Qw 
_model_server_result.datetime_utc      '2024-11-23 07:00:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ddd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":608}' 
#
_entry.id    5DDD 
#
_exptl.entry_id    5DDD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5DDD 
_cell.length_a            48.307 
_cell.length_b            79.713 
_cell.length_c            124.811 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DDD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 L N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 133 n n 
S C1 DMS sing 134 n n 
S C2 DMS sing 135 n n 
C1 H11 DMS sing 136 n n 
C1 H12 DMS sing 137 n n 
C1 H13 DMS sing 138 n n 
C2 H21 DMS sing 139 n n 
C2 H22 DMS sing 140 n n 
C2 H23 DMS sing 141 n n 
#
_atom_sites.entry_id                     5DDD 
_atom_sites.fract_transf_matrix[1][1]    0.020701 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012545 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008012 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 59X A 1 601 601 59X 59X . 
C 3 SO4 A 1 602 602 SO4 SO4 . 
D 3 SO4 A 1 603 603 SO4 SO4 . 
E 3 SO4 A 1 604 604 SO4 SO4 . 
F 3 SO4 A 1 605 605 SO4 SO4 . 
G 4 DMS A 1 606 606 DMS DMS . 
H 4 DMS A 1 607 607 DMS DMS . 
I 4 DMS A 1 608 608 DMS DMS . 
J 5 PG4 A 1 609 609 PG4 PG4 . 
K 6 PEG A 1 610 610 PEG PEG . 
L 4 DMS A 1 611 611 DMS DMS . 
M 7 HOH A 1 701 701 HOH HOH . 
M 7 HOH A 2 702 702 HOH HOH . 
M 7 HOH A 3 703 703 HOH HOH . 
M 7 HOH A 4 704 704 HOH HOH . 
M 7 HOH A 5 705 705 HOH HOH . 
M 7 HOH A 6 706 706 HOH HOH . 
M 7 HOH A 7 707 707 HOH HOH . 
M 7 HOH A 8 708 708 HOH HOH . 
M 7 HOH A 9 709 709 HOH HOH . 
M 7 HOH A 10 710 710 HOH HOH . 
M 7 HOH A 11 711 711 HOH HOH . 
M 7 HOH A 12 712 712 HOH HOH . 
M 7 HOH A 13 713 713 HOH HOH . 
M 7 HOH A 14 714 714 HOH HOH . 
M 7 HOH A 15 715 715 HOH HOH . 
M 7 HOH A 16 716 716 HOH HOH . 
M 7 HOH A 17 717 717 HOH HOH . 
M 7 HOH A 18 718 718 HOH HOH . 
M 7 HOH A 19 719 719 HOH HOH . 
M 7 HOH A 20 720 720 HOH HOH . 
M 7 HOH A 21 721 721 HOH HOH . 
M 7 HOH A 22 722 722 HOH HOH . 
M 7 HOH A 23 723 723 HOH HOH . 
M 7 HOH A 24 724 724 HOH HOH . 
M 7 HOH A 25 725 725 HOH HOH . 
M 7 HOH A 26 726 726 HOH HOH . 
M 7 HOH A 27 727 727 HOH HOH . 
M 7 HOH A 28 728 728 HOH HOH . 
M 7 HOH A 29 729 729 HOH HOH . 
M 7 HOH A 30 730 730 HOH HOH . 
M 7 HOH A 31 731 731 HOH HOH . 
M 7 HOH A 32 732 732 HOH HOH . 
M 7 HOH A 33 733 733 HOH HOH . 
M 7 HOH A 34 734 734 HOH HOH . 
M 7 HOH A 35 735 735 HOH HOH . 
M 7 HOH A 36 736 736 HOH HOH . 
M 7 HOH A 37 737 737 HOH HOH . 
M 7 HOH A 38 738 738 HOH HOH . 
M 7 HOH A 39 739 739 HOH HOH . 
M 7 HOH A 40 740 740 HOH HOH . 
M 7 HOH A 41 741 741 HOH HOH . 
M 7 HOH A 42 742 742 HOH HOH . 
M 7 HOH A 43 743 743 HOH HOH . 
M 7 HOH A 44 744 744 HOH HOH . 
M 7 HOH A 45 745 745 HOH HOH . 
M 7 HOH A 46 746 746 HOH HOH . 
M 7 HOH A 47 747 747 HOH HOH . 
M 7 HOH A 48 748 748 HOH HOH . 
M 7 HOH A 49 749 749 HOH HOH . 
M 7 HOH A 50 750 750 HOH HOH . 
M 7 HOH A 51 751 751 HOH HOH . 
M 7 HOH A 52 752 752 HOH HOH . 
M 7 HOH A 53 753 753 HOH HOH . 
M 7 HOH A 54 754 754 HOH HOH . 
M 7 HOH A 55 755 755 HOH HOH . 
M 7 HOH A 56 756 756 HOH HOH . 
M 7 HOH A 57 757 757 HOH HOH . 
M 7 HOH A 58 758 758 HOH HOH . 
M 7 HOH A 59 759 759 HOH HOH . 
M 7 HOH A 60 760 760 HOH HOH . 
M 7 HOH A 61 761 761 HOH HOH . 
M 7 HOH A 62 762 762 HOH HOH . 
M 7 HOH A 63 763 763 HOH HOH . 
M 7 HOH A 64 764 764 HOH HOH . 
M 7 HOH A 65 765 765 HOH HOH . 
M 7 HOH A 66 766 766 HOH HOH . 
M 7 HOH A 67 767 767 HOH HOH . 
M 7 HOH A 68 768 768 HOH HOH . 
M 7 HOH A 69 769 769 HOH HOH . 
M 7 HOH A 70 770 770 HOH HOH . 
M 7 HOH A 71 771 771 HOH HOH . 
M 7 HOH A 72 772 772 HOH HOH . 
M 7 HOH A 73 773 773 HOH HOH . 
M 7 HOH A 74 774 774 HOH HOH . 
M 7 HOH A 75 775 775 HOH HOH . 
M 7 HOH A 76 776 776 HOH HOH . 
M 7 HOH A 77 777 777 HOH HOH . 
M 7 HOH A 78 778 778 HOH HOH . 
M 7 HOH A 79 779 779 HOH HOH . 
M 7 HOH A 80 780 780 HOH HOH . 
M 7 HOH A 81 781 781 HOH HOH . 
M 7 HOH A 82 782 782 HOH HOH . 
M 7 HOH A 83 783 783 HOH HOH . 
M 7 HOH A 84 784 784 HOH HOH . 
M 7 HOH A 85 785 785 HOH HOH . 
M 7 HOH A 86 786 786 HOH HOH . 
M 7 HOH A 87 787 787 HOH HOH . 
M 7 HOH A 88 788 788 HOH HOH . 
M 7 HOH A 89 789 789 HOH HOH . 
M 7 HOH A 90 790 790 HOH HOH . 
M 7 HOH A 91 791 791 HOH HOH . 
M 7 HOH A 92 792 792 HOH HOH . 
M 7 HOH A 93 793 793 HOH HOH . 
M 7 HOH A 94 794 794 HOH HOH . 
M 7 HOH A 95 795 795 HOH HOH . 
M 7 HOH A 96 796 796 HOH HOH . 
M 7 HOH A 97 797 797 HOH HOH . 
M 7 HOH A 98 798 798 HOH HOH . 
M 7 HOH A 99 799 799 HOH HOH . 
M 7 HOH A 100 800 800 HOH HOH . 
M 7 HOH A 101 801 801 HOH HOH . 
M 7 HOH A 102 802 802 HOH HOH . 
M 7 HOH A 103 803 803 HOH HOH . 
M 7 HOH A 104 804 804 HOH HOH . 
M 7 HOH A 105 805 805 HOH HOH . 
M 7 HOH A 106 806 806 HOH HOH . 
M 7 HOH A 107 807 807 HOH HOH . 
M 7 HOH A 108 808 808 HOH HOH . 
M 7 HOH A 109 809 809 HOH HOH . 
M 7 HOH A 110 810 810 HOH HOH . 
M 7 HOH A 111 811 811 HOH HOH . 
M 7 HOH A 112 812 812 HOH HOH . 
M 7 HOH A 113 813 813 HOH HOH . 
M 7 HOH A 114 814 814 HOH HOH . 
M 7 HOH A 115 815 815 HOH HOH . 
M 7 HOH A 116 816 816 HOH HOH . 
M 7 HOH A 117 817 817 HOH HOH . 
M 7 HOH A 118 818 818 HOH HOH . 
M 7 HOH A 119 819 819 HOH HOH . 
M 7 HOH A 120 820 820 HOH HOH . 
M 7 HOH A 121 821 821 HOH HOH . 
M 7 HOH A 122 822 822 HOH HOH . 
M 7 HOH A 123 823 823 HOH HOH . 
M 7 HOH A 124 824 824 HOH HOH . 
M 7 HOH A 125 825 825 HOH HOH . 
M 7 HOH A 126 826 826 HOH HOH . 
M 7 HOH A 127 827 827 HOH HOH . 
M 7 HOH A 128 828 828 HOH HOH . 
M 7 HOH A 129 829 829 HOH HOH . 
M 7 HOH A 130 830 830 HOH HOH . 
M 7 HOH A 131 831 831 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . I 4 9.745 -0.507 -15.559 1 56.86 ? S DMS 608 A 1 
HETATM 2 O O DMS . . . I 4 8.502 0.279 -15.369 1 69.07 ? O DMS 608 A 1 
HETATM 3 C C1 DMS . . . I 4 10.945 0.616 -16.04 1 63.54 ? C1 DMS 608 A 1 
HETATM 4 C C2 DMS . . . I 4 10.247 -1.103 -14.053 1 58.91 ? C2 DMS 608 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#