data_5DHG # _model_server_result.job_id 2LuJz8tcUKOO1dbeAp5Oqg _model_server_result.datetime_utc '2024-11-29 16:13:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dhg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1503}' # _entry.id 5DHG # _exptl.entry_id 5DHG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.25 _cell.angle_gamma 90 _cell.entry_id 5DHG _cell.length_a 42.079 _cell.length_b 171.696 _cell.length_c 66.491 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DHG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G,H,I,J 2 1 A,C,D,E,F 3 2 B,G,H,I,J 3 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_655 x+1,y,z 1 0 0 0 1 0 0 0 1 42.079 0 0 3 'crystal symmetry operation' 1_656 x+1,y,z+1 1 0 0 0 1 0 0 0 1 26.839237 0 64.72096 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 197 A CYS 123 1_555 A SG CYS 274 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 B SG CYS 197 B CYS 1187 1_555 B SG CYS 274 B CYS 1264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 303 n n C1 O2 OLA sing 304 n n C1 C2 OLA sing 305 n n O2 HO2 OLA sing 306 n n C2 C3 OLA sing 307 n n C2 H21 OLA sing 308 n n C2 H22 OLA sing 309 n n C3 C4 OLA sing 310 n n C3 H31 OLA sing 311 n n C3 H32 OLA sing 312 n n C4 C5 OLA sing 313 n n C4 H41 OLA sing 314 n n C4 H42 OLA sing 315 n n C5 C6 OLA sing 316 n n C5 H51 OLA sing 317 n n C5 H52 OLA sing 318 n n C6 C7 OLA sing 319 n n C6 H61 OLA sing 320 n n C6 H62 OLA sing 321 n n C7 C8 OLA sing 322 n n C7 H71 OLA sing 323 n n C7 H72 OLA sing 324 n n C8 C9 OLA sing 325 n n C8 H81 OLA sing 326 n n C8 H82 OLA sing 327 n n C9 C10 OLA doub 328 z n C9 H9 OLA sing 329 n n C10 C11 OLA sing 330 n n C10 H10 OLA sing 331 n n C11 C12 OLA sing 332 n n C11 H111 OLA sing 333 n n C11 H112 OLA sing 334 n n C12 C13 OLA sing 335 n n C12 H121 OLA sing 336 n n C12 H122 OLA sing 337 n n C13 C14 OLA sing 338 n n C13 H131 OLA sing 339 n n C13 H132 OLA sing 340 n n C14 C15 OLA sing 341 n n C14 H141 OLA sing 342 n n C14 H142 OLA sing 343 n n C15 C16 OLA sing 344 n n C15 H151 OLA sing 345 n n C15 H152 OLA sing 346 n n C16 C17 OLA sing 347 n n C16 H161 OLA sing 348 n n C16 H162 OLA sing 349 n n C17 C18 OLA sing 350 n n C17 H171 OLA sing 351 n n C17 H172 OLA sing 352 n n C18 H181 OLA sing 353 n n C18 H182 OLA sing 354 n n C18 H183 OLA sing 355 n n # _atom_sites.entry_id 5DHG _atom_sites.fract_transf_matrix[1][1] 0.023765 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005595 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015451 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DGV A 1 1201 1 DGV DGV . D 3 OLA A 1 1202 4 OLA OLA . E 3 OLA A 1 1203 5 OLA OLA . F 3 OLA A 1 1204 6 OLA OLA . G 2 DGV B 1 1501 2 DGV DGV . H 4 OLC B 1 1502 1 OLC OLC . I 3 OLA B 1 1503 2 OLA OLA . J 3 OLA B 1 1504 3 OLA OLA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . I 3 -0.975 23.222 -37.935 1 93.51 ? C1 OLA 1503 B 1 HETATM 2 O O1 OLA . . . I 3 -1.173 22.029 -37.617 1 79.57 ? O1 OLA 1503 B 1 HETATM 3 O O2 OLA . . . I 3 0.199 23.621 -38.084 1 104.94 ? O2 OLA 1503 B 1 HETATM 4 C C2 OLA . . . I 3 -2.138 24.163 -38.136 1 95.49 ? C2 OLA 1503 B 1 HETATM 5 C C3 OLA . . . I 3 -1.878 25.049 -39.349 1 96.56 ? C3 OLA 1503 B 1 HETATM 6 C C4 OLA . . . I 3 -2.18 26.509 -39.035 1 95.2 ? C4 OLA 1503 B 1 HETATM 7 C C5 OLA . . . I 3 -1.36 27.437 -39.92 1 84.58 ? C5 OLA 1503 B 1 HETATM 8 C C6 OLA . . . I 3 -1.46 28.873 -39.422 1 78.24 ? C6 OLA 1503 B 1 HETATM 9 C C7 OLA . . . I 3 -0.412 29.731 -40.116 1 74.35 ? C7 OLA 1503 B 1 HETATM 10 C C8 OLA . . . I 3 0.258 30.72 -39.168 1 82.55 ? C8 OLA 1503 B 1 HETATM 11 C C9 OLA . . . I 3 -0.616 31.936 -38.975 1 77.17 ? C9 OLA 1503 B 1 HETATM 12 C C10 OLA . . . I 3 -0.084 33.047 -38.472 1 65.48 ? C10 OLA 1503 B 1 # _model_server_stats.io_time_ms 82 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 471 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 12 #